BLASTX nr result

ID: Glycyrrhiza24_contig00015005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015005
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240870.1| uncharacterized protein LOC100809850 [Glycin...   108   3e-22
ref|XP_003526988.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   102   3e-20
ref|XP_004138080.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    82   5e-14
ref|XP_002321646.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_004158327.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...    77   1e-12

>ref|NP_001240870.1| uncharacterized protein LOC100809850 [Glycine max]
           gi|255644673|gb|ACU22839.1| unknown [Glycine max]
          Length = 427

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/83 (68%), Positives = 66/83 (79%)
 Frame = -1

Query: 249 SSPWYPQHQSPYLPQSQDHHGHVGYNGHPSQSYGGGHAHAPEQRKGSDRKYSRIGDHYNS 70
           SS ++P++Q P+ PQSQD+ G VG+ G+  QSYGGG A  PEQ K  DRKYSRIGD Y S
Sbjct: 15  SSNFFPRYQQPHFPQSQDN-GSVGHYGYSPQSYGGGRA--PEQGKSLDRKYSRIGDDYKS 71

Query: 69  LDQVTEALASAGLESSNLIVGID 1
           LDQVT+ALA AGLESSNLIVGID
Sbjct: 72  LDQVTDALAKAGLESSNLIVGID 94


>ref|XP_003526988.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 428

 Score =  102 bits (254), Expect = 3e-20
 Identities = 55/88 (62%), Positives = 65/88 (73%)
 Frame = -1

Query: 264 SRSTTSSPWYPQHQSPYLPQSQDHHGHVGYNGHPSQSYGGGHAHAPEQRKGSDRKYSRIG 85
           SR  ++S + P++Q P+ PQSQD+ G VG+ G+ SQSY GG A  PEQ K  DRKY RIG
Sbjct: 11  SRQRSASNFLPRYQQPHFPQSQDN-GSVGHYGYSSQSYSGGRA--PEQVKSLDRKYLRIG 67

Query: 84  DHYNSLDQVTEALASAGLESSNLIVGID 1
           D Y SL QVT+ALA AGLESSNLIVG D
Sbjct: 68  DDYKSLKQVTDALAKAGLESSNLIVGFD 95


>ref|XP_004138080.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
           gi|449525732|ref|XP_004169870.1| PREDICTED: E3
           ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
          Length = 432

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 48/88 (54%), Positives = 56/88 (63%)
 Frame = -1

Query: 264 SRSTTSSPWYPQHQSPYLPQSQDHHGHVGYNGHPSQSYGGGHAHAPEQRKGSDRKYSRIG 85
           S S ++S  +  +  P  P +Q           P+ SYGG    APE RK  +RKYSRI 
Sbjct: 15  SSSRSNSQQWSHYGYPESPYTQSRSTPQYEYAPPTPSYGG--TQAPETRKRLERKYSRID 72

Query: 84  DHYNSLDQVTEALASAGLESSNLIVGID 1
           D+YNSLDQVTEALA AGLESSNLIVGID
Sbjct: 73  DNYNSLDQVTEALARAGLESSNLIVGID 100


>ref|XP_002321646.1| predicted protein [Populus trichocarpa] gi|222868642|gb|EEF05773.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 48/79 (60%), Positives = 55/79 (69%)
 Frame = -1

Query: 237 YPQHQSPYLPQSQDHHGHVGYNGHPSQSYGGGHAHAPEQRKGSDRKYSRIGDHYNSLDQV 58
           YPQ  SPY   SQ+H  +  Y   P QSYG     AP  R+  +RKYSRI D+YNSL+QV
Sbjct: 25  YPQ--SPYAQPSQEHTAYQHY-APPPQSYGD---RAPNSRR-LERKYSRIDDNYNSLEQV 77

Query: 57  TEALASAGLESSNLIVGID 1
           T+ALA AGLESSNLIVGID
Sbjct: 78  TDALARAGLESSNLIVGID 96


>ref|XP_004158327.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Cucumis sativus]
          Length = 456

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/88 (52%), Positives = 57/88 (64%), Gaps = 6/88 (6%)
 Frame = -1

Query: 246 SPWYPQHQ---SPYLPQSQDHHGHVGYNG---HPSQSYGGGHAHAPEQRKGSDRKYSRIG 85
           SP Y Q     SPY   SQ +     ++    HP ++Y GG A A + RK  DR+YSRI 
Sbjct: 23  SPPYAQEAYAPSPYGQASQSYVPQQSFSSPQYHPPENYHGGAA-AADNRKKFDRRYSRIA 81

Query: 84  DHYNSLDQVTEALASAGLESSNLIVGID 1
           D+Y SL++VTEALA AGLESSNLI+GID
Sbjct: 82  DNYKSLEEVTEALARAGLESSNLIIGID 109


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