BLASTX nr result

ID: Glycyrrhiza24_contig00014942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014942
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]   119   3e-25
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]   118   6e-25
emb|CAN83352.1| hypothetical protein VITISV_022160 [Vitis vinifera]   117   1e-24
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                    115   4e-24
gb|AAD22324.1| putative retroelement pol polyprotein [Arabidopsi...   113   2e-23

>emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]
          Length = 1442

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/116 (50%), Positives = 75/116 (64%)
 Frame = -3

Query: 348  LAEKFSLKDLGQPSHFLGVEIVPTASGLFLTQHHYVRDLLQHANMADSKPVSTPMXXXXX 169
            L E FSLKD+G  S FLGVE++PT +GLFL+QH Y+RDLL   NM  +K VSTP+     
Sbjct: 1080 LGENFSLKDMGNHSFFLGVEVIPTRAGLFLSQHQYIRDLLSTTNMLGAKDVSTPLSTTAS 1139

Query: 168  XXXXXXXXXXXXTLFRSIVGSLHYLAITRPDVAFPVNKLAQHMQAPTASHMQALKR 1
                        T FR ++GSL YL++TRPD++F VNKL+Q M  PT +H  A KR
Sbjct: 1140 LKLFDGTAPVDSTDFRRVIGSLQYLSLTRPDISFAVNKLSQFMHKPTTAHWTATKR 1195


>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
          Length = 1144

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/124 (45%), Positives = 81/124 (65%)
 Frame = -3

Query: 372  FLRKFKTALAEKFSLKDLGQPSHFLGVEIVPTASGLFLTQHHYVRDLLQHANMADSKPVS 193
            F+    T L ++FSLKD+G   +FLGVE++PT +G+FL+QH YVRD+L++ +MA +K VS
Sbjct: 887  FVAHVVTKLGDQFSLKDMGSLHYFLGVEVIPTTAGVFLSQHKYVRDILENTHMAGAKDVS 946

Query: 192  TPMXXXXXXXXXXXXXXXXXTLFRSIVGSLHYLAITRPDVAFPVNKLAQHMQAPTASHMQ 13
            TP+                 T +R ++GSL YL++TRPD+ F VNKL+Q M  PT +H  
Sbjct: 947  TPLSTTQSLHLVDGTNAVNSTEYRRVIGSLQYLSLTRPDIXFAVNKLSQFMHKPTVTHWT 1006

Query: 12   ALKR 1
            A KR
Sbjct: 1007 ATKR 1010


>emb|CAN83352.1| hypothetical protein VITISV_022160 [Vitis vinifera]
          Length = 1087

 Score =  117 bits (293), Expect = 1e-24
 Identities = 60/116 (51%), Positives = 76/116 (65%)
 Frame = -3

Query: 348  LAEKFSLKDLGQPSHFLGVEIVPTASGLFLTQHHYVRDLLQHANMADSKPVSTPMXXXXX 169
            L E FSLKD+G  S FLGVE++PT +GLFL+QH Y+RDLL   NM  +K VSTP+     
Sbjct: 824  LGEIFSLKDMGNLSFFLGVEVIPTRAGLFLSQHQYIRDLLSTTNMLGAKDVSTPLSTIAX 883

Query: 168  XXXXXXXXXXXXTLFRSIVGSLHYLAITRPDVAFPVNKLAQHMQAPTASHMQALKR 1
                        T FR ++GSL YL++TRPD++F VNKL+Q M  PT +H  A KR
Sbjct: 884  LKLFDGIVPVDSTDFRRVIGSLQYLSLTRPDISFAVNKLSQFMHKPTTAHWTATKR 939


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/123 (48%), Positives = 77/123 (62%)
 Frame = -3

Query: 369  LRKFKTALAEKFSLKDLGQPSHFLGVEIVPTASGLFLTQHHYVRDLLQHANMADSKPVST 190
            ++ F  +LA +FSLKDLG  S+FLG+E   T+ GL L Q  Y+ DLL+  NM D+KPVST
Sbjct: 1127 VQAFNASLASRFSLKDLGPLSYFLGIEATRTSRGLHLMQRKYITDLLKKHNMLDTKPVST 1186

Query: 189  PMXXXXXXXXXXXXXXXXXTLFRSIVGSLHYLAITRPDVAFPVNKLAQHMQAPTASHMQA 10
            PM                 T +R+++GSL YLA TRPD+AF VN+L+Q M  PT  H QA
Sbjct: 1187 PMSPTPKLSLLSGTALDDATEYRTVLGSLQYLAFTRPDIAFAVNRLSQFMHRPTNEHWQA 1246

Query: 9    LKR 1
             KR
Sbjct: 1247 AKR 1249


>gb|AAD22324.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 387

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/123 (46%), Positives = 74/123 (60%)
 Frame = -3

Query: 369 LRKFKTALAEKFSLKDLGQPSHFLGVEIVPTASGLFLTQHHYVRDLLQHANMADSKPVST 190
           ++ F  +LA++FSLKDLG  S+FLG+E   T  GL L Q  Y+ DLL   +M D+KP+ST
Sbjct: 85  VKNFNVSLADRFSLKDLGALSYFLGIEATRTKKGLHLMQRKYITDLLAKTHMLDAKPIST 144

Query: 189 PMXXXXXXXXXXXXXXXXXTLFRSIVGSLHYLAITRPDVAFPVNKLAQHMQAPTASHMQA 10
           PM                   +R I+GSL YL+ TRPD+AF VN+L+Q M  PT  H QA
Sbjct: 145 PMATTPKLSLHSGTILDDAKEYRMIIGSLQYLSFTRPDIAFVVNRLSQFMHKPTDEHWQA 204

Query: 9   LKR 1
            KR
Sbjct: 205 AKR 207


Top