BLASTX nr result

ID: Glycyrrhiza24_contig00014932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014932
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53239.1| JHS03A10.2 [Jatropha curcas]                          122   4e-26
ref|XP_002521758.1| TMV resistance protein N, putative [Ricinus ...   116   2e-24
ref|XP_002325501.1| tir-nbs-lrr resistance protein [Populus tric...   113   2e-23
ref|XP_002325496.1| tir-nbs-lrr resistance protein [Populus tric...   112   4e-23
ref|XP_002518711.1| leucine-rich repeat containing protein, puta...   110   1e-22

>dbj|BAJ53239.1| JHS03A10.2 [Jatropha curcas]
          Length = 947

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/102 (53%), Positives = 75/102 (73%)
 Frame = +1

Query: 4   DKVHAWKAALTQVAGLSGWDSQATRPEHTLVAEIVKDISRRLNRSFSSDCPGMIGIDRHV 183
           DKV  W+AAL +VAGLSGWDS A RPE TL+ E++KDI ++LNR F S   G+IGID  +
Sbjct: 133 DKVQRWRAALKEVAGLSGWDSMAIRPESTLIHEVLKDILKKLNRIFPSYSSGLIGIDSRI 192

Query: 184 EQIQSLLQLQSPGVRIIGIWGMGGVGKTTIASAVHHKLESQF 309
           + I++L+ ++S   R +GIWGMGG GKTT+A A + ++  QF
Sbjct: 193 KHIEALISMESSAARTVGIWGMGGSGKTTLARATYDRISYQF 234


>ref|XP_002521758.1| TMV resistance protein N, putative [Ricinus communis]
           gi|223538971|gb|EEF40568.1| TMV resistance protein N,
           putative [Ricinus communis]
          Length = 876

 Score =  116 bits (290), Expect = 2e-24
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +1

Query: 1   MDKVHAWKAALTQVAGLSGWDSQATRPEHTLVAEIVKDISRRLNRSFSSDCPGMIGIDRH 180
           M+KV +W++AL +   +SGW+S   RPE  L+ EIVKDIS++LN++  S   G++GID  
Sbjct: 133 MEKVESWRSALNEAGSISGWNSLVARPESKLIEEIVKDISKKLNQTSPSHSIGLVGIDSR 192

Query: 181 VEQIQSLLQLQSPGVRIIGIWGMGGVGKTTIASAVHHKLESQF 309
           +EQI+S+L L    VRIIG+WGMGG+GKTT+A A+  ++ +Q+
Sbjct: 193 LEQIESMLCLDMSDVRIIGVWGMGGIGKTTLAGAIFDQISAQY 235


>ref|XP_002325501.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862376|gb|EEE99882.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1435

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/103 (52%), Positives = 68/103 (66%)
 Frame = +1

Query: 1   MDKVHAWKAALTQVAGLSGWDSQATRPEHTLVAEIVKDISRRLNRSFSSDCPGMIGIDRH 180
           MDKV  W+A LT  A +SGWDSQ T PE  LV ++V+ I +RLNR+  S   G++G D  
Sbjct: 135 MDKVPRWRADLTNAASISGWDSQVTSPESKLVTDVVQTIWKRLNRASPSKLRGLVGADSR 194

Query: 181 VEQIQSLLQLQSPGVRIIGIWGMGGVGKTTIASAVHHKLESQF 309
           +EQI  LL +    VR IGIWGMGG+GKTTIA A +    SQ+
Sbjct: 195 IEQINKLLSIVPSDVRTIGIWGMGGIGKTTIAGAFYDSFSSQY 237


>ref|XP_002325496.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862371|gb|EEE99877.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1254

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/103 (51%), Positives = 69/103 (66%)
 Frame = +1

Query: 1   MDKVHAWKAALTQVAGLSGWDSQATRPEHTLVAEIVKDISRRLNRSFSSDCPGMIGIDRH 180
           MDKV  W+A +T  A +SGWDSQ T PE  LV E+V+ I +RLNR+  S   G++G+D  
Sbjct: 135 MDKVPRWRADMTYAASISGWDSQVTSPESKLVTEVVQTIWKRLNRASRSKLRGLVGVDSR 194

Query: 181 VEQIQSLLQLQSPGVRIIGIWGMGGVGKTTIASAVHHKLESQF 309
           +EQI  LL +    VR IGIWGMG +GKTTIA A  + + SQ+
Sbjct: 195 IEQINKLLSVVPSDVRRIGIWGMGAIGKTTIAEAFFYSISSQY 237


>ref|XP_002518711.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223542092|gb|EEF43636.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1109

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/103 (51%), Positives = 73/103 (70%), Gaps = 1/103 (0%)
 Frame = +1

Query: 4   DKVHAWKAALTQVAGLSGWDSQATRPEHTLVAEIVKDISRRLNRSFSSDCP-GMIGIDRH 180
           DKV +W+AAL  VA +SGWDS+ T PE  L+ +I++DI  +LN   SS  P G +GI   
Sbjct: 146 DKVKSWRAALKDVANISGWDSRVTSPESELIKKIIRDIWEKLNIMSSSYSPRGFVGIQTR 205

Query: 181 VEQIQSLLQLQSPGVRIIGIWGMGGVGKTTIASAVHHKLESQF 309
           ++QI+ LL L+   VRI+GIWGMGG+GKTT+A A++ K+  QF
Sbjct: 206 IKQIECLLCLKLSDVRIVGIWGMGGIGKTTLARAIYDKISHQF 248


Top