BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014890
         (1717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containi...   869   0.0  
ref|XP_003596872.1| Pentatricopeptide repeat-containing protein ...   812   0.0  
gb|ABD32771.1| Tetratricopeptide-like helical [Medicago truncatula]   772   0.0  
ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containi...   686   0.0  
ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containi...   686   0.0  

>ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
            chloroplastic-like [Glycine max]
          Length = 521

 Score =  869 bits (2246), Expect = 0.0
 Identities = 422/521 (80%), Positives = 472/521 (90%)
 Frame = +3

Query: 24   MILPACTATPIQHAQPPKPASPIPLPNQSHSTFSPTNPNTNQSLSLRHTPKSTNPTVAWT 203
            MILPAC ATP Q   PPK  S   LPNQ+HSTFS TN NTNQ LSLRHT K  +P V+WT
Sbjct: 1    MILPACNATPTQLPHPPKSPSSNSLPNQTHSTFSNTNTNTNQGLSLRHTTKYNDPIVSWT 60

Query: 204  SSIAHHCRSGHLVEAASEFVRMREAEVEPNNITLITLLSACAHYPSHGTSISFGATIHAH 383
            +SIA +C+SGHLV+AAS+FV+MREA +EPN+IT ITLLSACAHYPS  +SISFG  IHAH
Sbjct: 61   TSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSR-SSISFGTAIHAH 119

Query: 384  ACKLGLHVNDVMVGTALIDMYAKSGRLDSARLVFDQMGVRNLVSWNTIIDGYMRNGEIED 563
              KLGL +NDVMVGTALIDMYAK GR++SARL FDQMGVRNLVSWNT+IDGYMRNG+ ED
Sbjct: 120  VRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGKFED 179

Query: 564  ALNLFDELPVRNAVSWTVLIGGFVKKDYHEEALECFREMQVAGVAPDYVTVIAIIAACAN 743
            AL +FD LPV+NA+SWT LIGGFVKKDYHEEALECFREMQ++GVAPDYVTVIA+IAACAN
Sbjct: 180  ALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIAACAN 239

Query: 744  LGAVGLGLWVHRLVMTKDFRDNIRVSNSLIDMYARCGCIELARQVFDGMPQRTLVSWNSI 923
            LG +GLGLWVHRLVMT+DFR+N++VSNSLIDMY+RCGCI+LARQVFD MPQRTLVSWNSI
Sbjct: 240  LGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLVSWNSI 299

Query: 924  IVGFAVNGLADEALSFFHSMRKEGFEPDGVSYTGALTACSHAGLIDEGLRIFANMKRVRR 1103
            IVGFAVNGLADEALS+F+SM++EGF+PDGVSYTGAL ACSHAGLI EGLRIF +MKRVRR
Sbjct: 300  IVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVRR 359

Query: 1104 IAPRIEHYGCLVDLYSRAGRLEEAWDVIRNMPMEPNEVVLGSLLAACRTQGDVGLAEKVM 1283
            I PRIEHYGCLVDLYSRAGRLEEA +V++NMPM+PNEV+LGSLLAACRTQG++GLAE VM
Sbjct: 360  ILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQGNIGLAENVM 419

Query: 1284 KYIVELDPEGDSNYVLLSNIYAAVGKWDGANKVRRKMKDRGIQKNPGFSSIEIDSSIHKF 1463
             Y++ELD  GDSNYVLLSNIYAAVGKWDGANKVRR+MK+RGIQK PGFSSIEIDSSIHKF
Sbjct: 420  NYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFSSIEIDSSIHKF 479

Query: 1464 VAGDKYHEESDYIYAALELLSFELQLCGYVPDLSGKESYED 1586
            V+GDK HEE D+IYAALE LSFELQLCGY+PD SGKESYED
Sbjct: 480  VSGDKSHEEKDHIYAALEFLSFELQLCGYIPDFSGKESYED 520


>ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical
            [Medicago truncatula] gi|355485920|gb|AES67123.1|
            Pentatricopeptide repeat-containing protein [Medicago
            truncatula]
          Length = 517

 Score =  812 bits (2098), Expect = 0.0
 Identities = 407/523 (77%), Positives = 456/523 (87%), Gaps = 1/523 (0%)
 Frame = +3

Query: 24   MILPACTATPIQHAQPPKPASPIPLPNQSHSTFSP-TNPNTNQSLSLRHTPKSTNPTVAW 200
            MIL  C ATP  H  PPK    I  P    STFSP  NPN NQ+LSL+H P S N TV+W
Sbjct: 1    MILTTCIATPTHHPDPPKQPPQIHPP----STFSPPNNPNKNQTLSLKHKPNS-NQTVSW 55

Query: 201  TSSIAHHCRSGHLVEAASEFVRMREAEVEPNNITLITLLSACAHYPSHGTSISFGATIHA 380
            TSSI+HHC++ + ++AASEF++M EAEVEPN+ITLITLLSACAH PS  TSI+FGA +H 
Sbjct: 56   TSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSK-TSITFGAALHT 114

Query: 381  HACKLGLHVNDVMVGTALIDMYAKSGRLDSARLVFDQMGVRNLVSWNTIIDGYMRNGEIE 560
            HA K G  +NDVMVGTALIDMYAK G+LD ARLVFDQMGVRNLVSWNT+IDGYM+NG+++
Sbjct: 115  HAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVD 174

Query: 561  DALNLFDELPVRNAVSWTVLIGGFVKKDYHEEALECFREMQVAGVAPDYVTVIAIIAACA 740
            DAL LFD+LPV+N VSWTV+IGGFVKK+ +EEALECFREMQ+AGV PD+VTVIAII+ACA
Sbjct: 175  DALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISACA 234

Query: 741  NLGAVGLGLWVHRLVMTKDFRDNIRVSNSLIDMYARCGCIELARQVFDGMPQRTLVSWNS 920
            NLGA+GLGLWVHRLVM K+FRDN++V NSLIDMYARCGCIELARQVFDGM QR LVSWNS
Sbjct: 235  NLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNS 294

Query: 921  IIVGFAVNGLADEALSFFHSMRKEGFEPDGVSYTGALTACSHAGLIDEGLRIFANMKRVR 1100
            IIVGFAVNGLAD+ALSFF SM+KEG EP+GVSYT ALTACSHAGLIDEGL+IFA++KR  
Sbjct: 295  IIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDH 354

Query: 1101 RIAPRIEHYGCLVDLYSRAGRLEEAWDVIRNMPMEPNEVVLGSLLAACRTQGDVGLAEKV 1280
            R +PRIEHYGCLVDLYSRAGRL+EAWDVI+ MPM PNEVVLGSLLAACRTQGDV LAEKV
Sbjct: 355  RNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKV 414

Query: 1281 MKYIVELDPEGDSNYVLLSNIYAAVGKWDGANKVRRKMKDRGIQKNPGFSSIEIDSSIHK 1460
            MKY VEL P GDSNYVL SNIYAAVGKWDGA+KVRR+MK+RG+QKN  FSSIEIDS IHK
Sbjct: 415  MKYQVELYPGGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHK 474

Query: 1461 FVAGDKYHEESDYIYAALELLSFELQLCGYVPDLSGKESYEDD 1589
            FV+GDKYHEE+DYIY+ALELLSFEL L GYVPD SGKES  DD
Sbjct: 475  FVSGDKYHEENDYIYSALELLSFELHLYGYVPDFSGKESDVDD 517


>gb|ABD32771.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 497

 Score =  772 bits (1993), Expect = 0.0
 Identities = 392/523 (74%), Positives = 439/523 (83%), Gaps = 1/523 (0%)
 Frame = +3

Query: 24   MILPACTATPIQHAQPPKPASPIPLPNQSHSTFSP-TNPNTNQSLSLRHTPKSTNPTVAW 200
            MIL  C ATP  H  PPK    I  P    STFSP  NPN NQ+LSL+H P S N TV+W
Sbjct: 1    MILTTCIATPTHHPDPPKQPPQIHPP----STFSPPNNPNKNQTLSLKHKPNS-NQTVSW 55

Query: 201  TSSIAHHCRSGHLVEAASEFVRMREAEVEPNNITLITLLSACAHYPSHGTSISFGATIHA 380
            TSSI+HHC++ + ++AASEF++M EAEVEPN+ITLITLLSACAH PS  TSI+FGA +H 
Sbjct: 56   TSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSK-TSITFGAALHT 114

Query: 381  HACKLGLHVNDVMVGTALIDMYAKSGRLDSARLVFDQMGVRNLVSWNTIIDGYMRNGEIE 560
            HA K G  +NDVMVGTALIDMYAK G+LD ARLVFDQMGVRNLVSWNT+IDGYM+NG+++
Sbjct: 115  HAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVD 174

Query: 561  DALNLFDELPVRNAVSWTVLIGGFVKKDYHEEALECFREMQVAGVAPDYVTVIAIIAACA 740
            DAL LFD+LPV+N VSWTV+IGGFVKK+ +EEALECFREMQ+AGV PD+VTVIAII+ACA
Sbjct: 175  DALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISACA 234

Query: 741  NLGAVGLGLWVHRLVMTKDFRDNIRVSNSLIDMYARCGCIELARQVFDGMPQRTLVSWNS 920
            NLGA+GLGLWVHRLVM K+FRDN++V NSLIDMYARCGCIELARQVFDGM QR LVSWNS
Sbjct: 235  NLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNS 294

Query: 921  IIVGFAVNGLADEALSFFHSMRKEGFEPDGVSYTGALTACSHAGLIDEGLRIFANMKRVR 1100
            IIVGFAVNGLAD+ALSFF                     CSHAGLIDEGL+IFA++KR  
Sbjct: 295  IIVGFAVNGLADKALSFF--------------------PCSHAGLIDEGLKIFADIKRDH 334

Query: 1101 RIAPRIEHYGCLVDLYSRAGRLEEAWDVIRNMPMEPNEVVLGSLLAACRTQGDVGLAEKV 1280
            R +PRIEHYGCLVDLYSRAGRL+EAWDVI+ MPM PNEVVLGSLLAACRTQGDV LAEKV
Sbjct: 335  RNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKV 394

Query: 1281 MKYIVELDPEGDSNYVLLSNIYAAVGKWDGANKVRRKMKDRGIQKNPGFSSIEIDSSIHK 1460
            MKY VEL P GDSNYVL SNIYAAVGKWDGA+KVRR+MK+RG+QKN  FSSIEIDS IHK
Sbjct: 395  MKYQVELYPGGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHK 454

Query: 1461 FVAGDKYHEESDYIYAALELLSFELQLCGYVPDLSGKESYEDD 1589
            FV+GDKYHEE+DYIY+ALELLSFEL L GYVPD SGKESY DD
Sbjct: 455  FVSGDKYHEENDYIYSALELLSFELHLYGYVPDFSGKESYVDD 497


>ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
            chloroplastic-like [Cucumis sativus]
          Length = 525

 Score =  686 bits (1770), Expect = 0.0
 Identities = 335/525 (63%), Positives = 420/525 (80%), Gaps = 5/525 (0%)
 Frame = +3

Query: 30   LPACTATPIQHAQPPKPASPIPLPNQSHSTFSPTNPNT-NQSLSLRHTPKSTNPTVAWTS 206
            +P+ TATP Q   PP   S IPL N +   F P +PN+ ++++S +  P S +P V WTS
Sbjct: 4    IPSHTATPSQLQLPPFTPSSIPLSNPTKLNF-PRSPNSPHRNISSKFNPNSVDPIVLWTS 62

Query: 207  SIAHHCRSGHLVEAASEFVRMREAEVEPNNITLITLLSACAHYPSHGTSISFGATIHAHA 386
            S+A +CR+G L EAA+EF RMR A VEPN+IT ITLLSACA +PS   S  F +++H +A
Sbjct: 63   SLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE--SFFFASSLHGYA 120

Query: 387  CKLGLHVNDVMVGTALIDMYAKSGRLDSARLVFDQMGVRNLVSWNTIIDGYMRNGEIEDA 566
            CK GL    VMVGTALIDMY+K  +L  AR VF  +GV+N VSWNT+++G+MRNGEIE A
Sbjct: 121  CKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELA 180

Query: 567  LNLFDELPVRNAVSWTVLIGGFVKKDYHEEALECFREMQVAGVAPDYVTVIAIIAACANL 746
            + LFDE+P R+A+SWT LI G +K  Y E+ALECF +MQ +GVA DYV++IA++AACA+L
Sbjct: 181  IQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADL 240

Query: 747  GAVGLGLWVHRLVMTKDFRDNIRVSNSLIDMYARCGCIELARQVFDGMPQRTLVSWNSII 926
            GA+ LGLWVHR VM ++F+DNI++SNSLIDMY+RCGCIE ARQVF  M +RTLVSWNSII
Sbjct: 241  GALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSII 300

Query: 927  VGFAVNGLADEALSFFHSMRKEGFEPDGVSYTGALTACSHAGLIDEGLRIFANMKRVRRI 1106
            VGFAVNG ADE+L FF++M+KEGF+PDGVSYTGALTACSHAGL+++GL +F NMK V +I
Sbjct: 301  VGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKI 360

Query: 1107 APRIEHYGCLVDLYSRAGRLEEAWDVIRNMPMEPNEVVLGSLLAACRTQGDVGLAEKVMK 1286
             PRIEHYGC+VDLY RAGRLE+A ++I  MPM+PNEVVLGSLLAACRT GDV LAE++MK
Sbjct: 361  TPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMK 420

Query: 1287 YIVELDPEGDSNYVLLSNIYAAVGKWDGANKVRRKMKDRGIQKNPGFSSIEIDSSIHKFV 1466
            ++ +LDPEGD+ YVLLSNIYAA+GKWDGAN VRR MK RG+QK PG+SS+EID  +H+FV
Sbjct: 421  HLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSVEIDGKVHEFV 480

Query: 1467 AGDKYHEESDYIYAALELLSFELQLCGYVPD----LSGKESYEDD 1589
            AGD YH ++D IY+ L+LL  EL++CGYVP     L+ KES +DD
Sbjct: 481  AGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTILNTKESNKDD 525


>ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
            chloroplastic-like [Vitis vinifera]
          Length = 518

 Score =  686 bits (1769), Expect = 0.0
 Identities = 342/522 (65%), Positives = 417/522 (79%)
 Frame = +3

Query: 24   MILPACTATPIQHAQPPKPASPIPLPNQSHSTFSPTNPNTNQSLSLRHTPKSTNPTVAWT 203
            M LPA TAT          +SP   PNQ   TF     +T   L+  HT    +P V+WT
Sbjct: 1    MSLPAYTATTPSSLVTHPNSSPNSKPNQP--TFPSRPHSTKYHLTRSHTHSPIDPIVSWT 58

Query: 204  SSIAHHCRSGHLVEAASEFVRMREAEVEPNNITLITLLSACAHYPSHGTSISFGATIHAH 383
            SSIA HCR+G L EAA+EF RM+ A V PN+IT +TLLSAC  +P  G  + FG +IHA+
Sbjct: 59   SSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEG--LRFGGSIHAY 116

Query: 384  ACKLGLHVNDVMVGTALIDMYAKSGRLDSARLVFDQMGVRNLVSWNTIIDGYMRNGEIED 563
              KLGL   +VMVGTAL+DMY+K G+LD A L+FD+M VRN VSWNT+IDG MRNGE+ +
Sbjct: 117  VRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGE 176

Query: 564  ALNLFDELPVRNAVSWTVLIGGFVKKDYHEEALECFREMQVAGVAPDYVTVIAIIAACAN 743
            A+ LFD++  R+A+SWT +IGGFVKK   E+ALE FREMQ+AGV PDYVT+I+++AACAN
Sbjct: 177  AIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACAN 236

Query: 744  LGAVGLGLWVHRLVMTKDFRDNIRVSNSLIDMYARCGCIELARQVFDGMPQRTLVSWNSI 923
            LGA+GLGLW++R VM +DF+DNI++SNSLIDMY+RCGCI LARQVF+ MP+R+LVSWNS+
Sbjct: 237  LGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSM 296

Query: 924  IVGFAVNGLADEALSFFHSMRKEGFEPDGVSYTGALTACSHAGLIDEGLRIFANMKRVRR 1103
            IVGFA+NG A+EAL FF+ MRKEGF PDGVS+TGALTACSH+GL+DEGL+ F  MKR R+
Sbjct: 297  IVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRK 356

Query: 1104 IAPRIEHYGCLVDLYSRAGRLEEAWDVIRNMPMEPNEVVLGSLLAACRTQGDVGLAEKVM 1283
            I+PRIEHYGCLVDLYSRAGRLE+A +VI NMPM+PNEVVLGSLLAACRT GDVGLAE++M
Sbjct: 357  ISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLM 416

Query: 1284 KYIVELDPEGDSNYVLLSNIYAAVGKWDGANKVRRKMKDRGIQKNPGFSSIEIDSSIHKF 1463
            KY+ E+DP  DSNYVLLSNIYAAVG+WDGA+KVR+KMK  GI K PGFSSIE+D SIH+F
Sbjct: 417  KYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEF 476

Query: 1464 VAGDKYHEESDYIYAALELLSFELQLCGYVPDLSGKESYEDD 1589
            VAGDK H E+  IYA L+ L  EL++CGYVP++   +SYE D
Sbjct: 477  VAGDKTHVETQNIYAMLDHLFLELRICGYVPEIEVGKSYEHD 518