BLASTX nr result

ID: Glycyrrhiza24_contig00014888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014888
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36850.3| unnamed protein product [Vitis vinifera]              306   5e-81
ref|XP_003519011.1| PREDICTED: phytochrome A-associated F-box pr...   305   1e-80
ref|XP_003625923.1| Phytochrome A-associated F-box protein [Medi...   231   1e-58
gb|AFK45289.1| unknown [Medicago truncatula]                          230   4e-58
ref|XP_003521567.1| PREDICTED: phytochrome A-associated F-box pr...   222   9e-56

>emb|CBI36850.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  306 bits (784), Expect = 5e-81
 Identities = 146/237 (61%), Positives = 172/237 (72%), Gaps = 5/237 (2%)
 Frame = +2

Query: 128 ESLFSAVTDDIILNILGKMEEDPRHWARVACVCTRFSSLVRHFCWKNKCSQXXXXXXXXX 307
           E++FS ++DD++L+IL K+E+DPR+WAR+ACVCT+FSSL+R+ CWK KCSQ         
Sbjct: 58  ETVFSKLSDDVVLSILFKLEDDPRYWARLACVCTKFSSLIRNVCWKTKCSQTIPSIVADL 117

Query: 308 XXXXXXXXXXXX-----KLAVCCPGLLHAGVVAASGQSKKRKKTLTPCRSHLACGNWELR 472
                            KL+VCCPGLLH+G V          K+  P RSHLA G W L 
Sbjct: 118 FSGPGDSSPPGGWAALHKLSVCCPGLLHSGTV----------KSCRPLRSHLASGVWNLS 167

Query: 473 REQGCKLLGRQFRDDCLYICDWPGCVHFEEKRKYCLFRGVFRDFKRTRVWRVIEEGRNRN 652
           REQG KLL  +FR DCLYICDWPGCVH EEKR Y LFRGVF++FKR+RVWR I +G NR+
Sbjct: 168 REQGNKLLASRFRGDCLYICDWPGCVHVEEKRNYMLFRGVFKNFKRSRVWRTINDG-NRS 226

Query: 653 EVVDVGCAFCACSHTWDLLSAFCLRRGFGYHDDGEPVVRAYVCENGHVSGAWTDVPL 823
           + VD+ CAFC C  TWDL SAFCLRRGFGYHDDGEPVVRAYVCENGHVSGAWT+ PL
Sbjct: 227 K-VDLNCAFCPCKETWDLHSAFCLRRGFGYHDDGEPVVRAYVCENGHVSGAWTEYPL 282


>ref|XP_003519011.1| PREDICTED: phytochrome A-associated F-box protein-like [Glycine
           max]
          Length = 229

 Score =  305 bits (780), Expect = 1e-80
 Identities = 146/235 (62%), Positives = 171/235 (72%), Gaps = 1/235 (0%)
 Frame = +2

Query: 122 MEESLFSAVTDDIILNILGKMEEDPRHWARVACVCTRFSSLVRHFCWKNKCSQXXXXXXX 301
           MEES+F+A+TDDI+L+IL K+++DPRHWAR ACV TRFS+L+RHFCWK KCSQ       
Sbjct: 1   MEESVFAALTDDIVLSILAKLDDDPRHWARAACVSTRFSTLIRHFCWKTKCSQTFPSSLI 60

Query: 302 XXXXXXXXXXXXXXKLAVCCPGLLHAGVVAASGQSKKRKKTLTPCR-SHLACGNWELRRE 478
                         KLAVCCPGL HAG+ A    +K+    +  CR SHLA G   LRRE
Sbjct: 61  SSDSPSTWSSLL--KLAVCCPGLRHAGIPADRNAAKR----MNICRNSHLAGGYRHLRRE 114

Query: 479 QGCKLLGRQFRDDCLYICDWPGCVHFEEKRKYCLFRGVFRDFKRTRVWRVIEEGRNRNEV 658
           QGCKLL RQFRDD L++CDWPGCVH  ++R Y LFRG F +FK + VWR I + + R   
Sbjct: 115 QGCKLLARQFRDDNLFLCDWPGCVHSYQRRDYMLFRGFFHNFKASGVWRSISDEKRRK-- 172

Query: 659 VDVGCAFCACSHTWDLLSAFCLRRGFGYHDDGEPVVRAYVCENGHVSGAWTDVPL 823
           +DV CAFC C HTWDL SAFCLRRGFGYH DGEPVVRAYVCENGHVSGAWT++PL
Sbjct: 173 IDVECAFCTCQHTWDLQSAFCLRRGFGYHLDGEPVVRAYVCENGHVSGAWTNIPL 227


>ref|XP_003625923.1| Phytochrome A-associated F-box protein [Medicago truncatula]
           gi|357516351|ref|XP_003628464.1| Phytochrome
           A-associated F-box protein [Medicago truncatula]
           gi|355500938|gb|AES82141.1| Phytochrome A-associated
           F-box protein [Medicago truncatula]
           gi|355522486|gb|AET02940.1| Phytochrome A-associated
           F-box protein [Medicago truncatula]
          Length = 304

 Score =  231 bits (590), Expect = 1e-58
 Identities = 103/151 (68%), Positives = 122/151 (80%)
 Frame = +2

Query: 371 LHAGVVAASGQSKKRKKTLTPCRSHLACGNWELRREQGCKLLGRQFRDDCLYICDWPGCV 550
           +  GVV    ++KKRK   +   SHLA G W L REQG KLL RQFRDDCLY+CDWPGCV
Sbjct: 154 IRTGVVDVPPEAKKRKVNGS-LSSHLATGKWTLSREQGSKLLARQFRDDCLYVCDWPGCV 212

Query: 551 HFEEKRKYCLFRGVFRDFKRTRVWRVIEEGRNRNEVVDVGCAFCACSHTWDLLSAFCLRR 730
           H EEKRKY LFRG+F +FK+TRVW+ + +  NR + +D+ CAFC+C+HTWDL SAFCLRR
Sbjct: 213 HLEEKRKYRLFRGIFMNFKKTRVWKTVNDISNRKK-IDLACAFCSCNHTWDLHSAFCLRR 271

Query: 731 GFGYHDDGEPVVRAYVCENGHVSGAWTDVPL 823
           GFGYHDDGEPVVRAYVC+NGHVSGAWTD+P+
Sbjct: 272 GFGYHDDGEPVVRAYVCDNGHVSGAWTDMPM 302



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 40/85 (47%), Positives = 50/85 (58%)
 Frame = +2

Query: 134 LFSAVTDDIILNILGKMEEDPRHWARVACVCTRFSSLVRHFCWKNKCSQXXXXXXXXXXX 313
           + S +TDDIIL IL K+EEDPR WAR++CV T+ +SL+  FCWKNK S            
Sbjct: 1   MLSELTDDIILKILWKVEEDPRDWARLSCVSTKLNSLIHDFCWKNKSS----IIIPSELL 56

Query: 314 XXXXXXXXXXKLAVCCPGLLHAGVV 388
                     KL  CCPG LHAG++
Sbjct: 57  LSSSQDLSLHKLPFCCPGPLHAGIL 81


>gb|AFK45289.1| unknown [Medicago truncatula]
          Length = 304

 Score =  230 bits (586), Expect = 4e-58
 Identities = 102/151 (67%), Positives = 121/151 (80%)
 Frame = +2

Query: 371 LHAGVVAASGQSKKRKKTLTPCRSHLACGNWELRREQGCKLLGRQFRDDCLYICDWPGCV 550
           +  GVV    ++KKRK   +   SHLA G W L REQG KLL RQFRDDCLY+CDWPGCV
Sbjct: 154 IRTGVVDVPPEAKKRKVNGS-LSSHLATGKWTLSREQGSKLLARQFRDDCLYVCDWPGCV 212

Query: 551 HFEEKRKYCLFRGVFRDFKRTRVWRVIEEGRNRNEVVDVGCAFCACSHTWDLLSAFCLRR 730
           H EEKRKY LFRG+F +FK+TRVW+ + +  NR + +D+ C FC+C+HTWDL SAFCLRR
Sbjct: 213 HLEEKRKYRLFRGIFMNFKKTRVWKTVNDISNRKK-IDLACVFCSCNHTWDLHSAFCLRR 271

Query: 731 GFGYHDDGEPVVRAYVCENGHVSGAWTDVPL 823
           GFGYHDDGEPVVRAYVC+NGHVSGAWTD+P+
Sbjct: 272 GFGYHDDGEPVVRAYVCDNGHVSGAWTDMPM 302



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 40/85 (47%), Positives = 50/85 (58%)
 Frame = +2

Query: 134 LFSAVTDDIILNILGKMEEDPRHWARVACVCTRFSSLVRHFCWKNKCSQXXXXXXXXXXX 313
           + S +TDDIIL IL K+EEDPR WAR++CV T+ +SL+  FCWKNK S            
Sbjct: 1   MLSELTDDIILKILWKVEEDPRDWARLSCVSTKLNSLIHDFCWKNKSS----IIIPSELL 56

Query: 314 XXXXXXXXXXKLAVCCPGLLHAGVV 388
                     KL  CCPG LHAG++
Sbjct: 57  LSSSQDLSLHKLPFCCPGPLHAGIL 81


>ref|XP_003521567.1| PREDICTED: phytochrome A-associated F-box protein-like [Glycine
           max]
          Length = 327

 Score =  222 bits (566), Expect = 9e-56
 Identities = 100/152 (65%), Positives = 121/152 (79%), Gaps = 1/152 (0%)
 Frame = +2

Query: 371 LHAGV-VAASGQSKKRKKTLTPCRSHLACGNWELRREQGCKLLGRQFRDDCLYICDWPGC 547
           + AGV VA+     K++K      SHLA G+W L REQG KLL R+FR DCLY+C+WPGC
Sbjct: 176 VRAGVDVASISACSKKRKLSRAWSSHLASGSWTLSREQGSKLLARKFRYDCLYVCEWPGC 235

Query: 548 VHFEEKRKYCLFRGVFRDFKRTRVWRVIEEGRNRNEVVDVGCAFCACSHTWDLLSAFCLR 727
           VH EEKRKYCLFRGVF++F+RT VWR I++G+ R   +D+ CAFCAC  TWDL S+FCLR
Sbjct: 236 VHKEEKRKYCLFRGVFKNFRRTMVWRTIQDGKKRK--MDLPCAFCACEFTWDLHSSFCLR 293

Query: 728 RGFGYHDDGEPVVRAYVCENGHVSGAWTDVPL 823
            GFG+HDDGEP+VRAYVCENGHVSGAWTD+P+
Sbjct: 294 PGFGFHDDGEPMVRAYVCENGHVSGAWTDLPI 325



 Score =  100 bits (250), Expect = 4e-19
 Identities = 47/88 (53%), Positives = 59/88 (67%)
 Frame = +2

Query: 125 EESLFSAVTDDIILNILGKMEEDPRHWARVACVCTRFSSLVRHFCWKNKCSQXXXXXXXX 304
           +++LFS +TDDI+LNI  K+E+DPRHWAR+ACVCT+FSSLVR FCWK KCS         
Sbjct: 8   KKNLFSELTDDIVLNIFYKLEDDPRHWARLACVCTKFSSLVRDFCWKTKCS--LTIPQDL 65

Query: 305 XXXXXXXXXXXXXKLAVCCPGLLHAGVV 388
                        KL+ CCPGL HAG++
Sbjct: 66  LSAAASDPPLSLHKLSFCCPGLRHAGLL 93


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