BLASTX nr result

ID: Glycyrrhiza24_contig00014870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014870
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding prote...   149   2e-58
ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional ...   148   1e-57
ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding prote...   140   7e-55
ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional ...   138   3e-54
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...   143   2e-53

>ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           [Glycine max]
          Length = 409

 Score =  149 bits (375), Expect(2) = 2e-58
 Identities = 72/73 (98%), Positives = 73/73 (100%)
 Frame = -2

Query: 219 VLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNR 40
           VLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETF+NR
Sbjct: 137 VLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFTNR 196

Query: 39  YPSVKAAKVVFDA 1
           YPSVKAAKVVFDA
Sbjct: 197 YPSVKAAKVVFDA 209



 Score =  102 bits (254), Expect(2) = 2e-58
 Identities = 46/47 (97%), Positives = 47/47 (100%)
 Frame = -1

Query: 451 GSSAENKTIWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLS 311
           GSSAENKT+WVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLS
Sbjct: 74  GSSAENKTVWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLS 120


>ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 410

 Score =  148 bits (374), Expect(2) = 1e-57
 Identities = 72/73 (98%), Positives = 72/73 (98%)
 Frame = -2

Query: 219 VLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNR 40
           VLQNYAGILMPNTEQPFRLNWATF TGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNR
Sbjct: 135 VLQNYAGILMPNTEQPFRLNWATFGTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNR 194

Query: 39  YPSVKAAKVVFDA 1
           YPSVKAAKVVFDA
Sbjct: 195 YPSVKAAKVVFDA 207



 Score =  100 bits (249), Expect(2) = 1e-57
 Identities = 45/47 (95%), Positives = 46/47 (97%)
 Frame = -1

Query: 451 GSSAENKTIWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLS 311
           GSSAENKT+WVGDLHHWMDENYLHRCFAS GEISSIKVIRNKQTGLS
Sbjct: 72  GSSAENKTVWVGDLHHWMDENYLHRCFASNGEISSIKVIRNKQTGLS 118


>ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           [Glycine max]
          Length = 425

 Score =  140 bits (352), Expect(2) = 7e-55
 Identities = 68/73 (93%), Positives = 71/73 (97%)
 Frame = -2

Query: 219 VLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNR 40
           VLQNYAGILMPNTEQPFRLNWATFSTGDK SDNVPDLSIFVGDLAADVTDS+LHETF++ 
Sbjct: 154 VLQNYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASV 213

Query: 39  YPSVKAAKVVFDA 1
           YPSVKAAKVVFDA
Sbjct: 214 YPSVKAAKVVFDA 226



 Score = 99.4 bits (246), Expect(2) = 7e-55
 Identities = 44/47 (93%), Positives = 45/47 (95%)
 Frame = -1

Query: 451 GSSAENKTIWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLS 311
           GS  ENKTIW+GDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLS
Sbjct: 91  GSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLS 137


>ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 401

 Score =  138 bits (347), Expect(2) = 3e-54
 Identities = 67/73 (91%), Positives = 70/73 (95%)
 Frame = -2

Query: 219 VLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNR 40
           VLQNYAGILMPN EQPFRLNWATFSTGDK SDNVPDLSIFVGDLAADVTDS+LHETF++ 
Sbjct: 130 VLQNYAGILMPNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASV 189

Query: 39  YPSVKAAKVVFDA 1
           YPSVKAAKVVFDA
Sbjct: 190 YPSVKAAKVVFDA 202



 Score = 99.4 bits (246), Expect(2) = 3e-54
 Identities = 44/47 (93%), Positives = 45/47 (95%)
 Frame = -1

Query: 451 GSSAENKTIWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLS 311
           GS  ENKTIW+GDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLS
Sbjct: 67  GSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLS 113


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
           gi|223550967|gb|EEF52453.1| nuclear acid binding
           protein, putative [Ricinus communis]
          Length = 443

 Score =  143 bits (360), Expect(2) = 2e-53
 Identities = 69/73 (94%), Positives = 71/73 (97%)
 Frame = -2

Query: 219 VLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNR 40
           VLQNYAGILMPNTEQPFRLNWATFSTGDKRSDN PDLSIFVGDLAADVTDS+LHETF +R
Sbjct: 166 VLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFVSR 225

Query: 39  YPSVKAAKVVFDA 1
           YPSVKAAKVVFDA
Sbjct: 226 YPSVKAAKVVFDA 238



 Score = 91.7 bits (226), Expect(2) = 2e-53
 Identities = 39/47 (82%), Positives = 42/47 (89%)
 Frame = -1

Query: 451 GSSAENKTIWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLS 311
           G   EN+T+W+GDLHHWMDENYLH CFASTGEI SIKVIRNKQTGLS
Sbjct: 103 GGGGENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLS 149


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