BLASTX nr result

ID: Glycyrrhiza24_contig00014868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014868
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [...   152   4e-35
ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containin...   112   4e-23
emb|CBI36846.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_004172705.1| PREDICTED: zinc finger CCCH domain-containin...   108   3e-22
ref|XP_002882127.1| zinc finger helicase family protein [Arabido...   105   4e-21

>ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355480579|gb|AES61782.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 1035

 Score =  152 bits (383), Expect = 4e-35
 Identities = 74/86 (86%), Positives = 79/86 (91%)
 Frame = +2

Query: 5   YLDQVAESLGISSETMHSKYSQRLDPSKSNAYIKSELHMLIHDLVLHIHENEPDIEKSIL 184
           +  QVAE+LGI+SE MHSKYS  L+PS SNAYIKSELH LIH+LVLHIHENEPDIEKSIL
Sbjct: 232 FFSQVAETLGITSEIMHSKYSSCLNPSISNAYIKSELHSLIHELVLHIHENEPDIEKSIL 291

Query: 185 VFLPTYYSLEQQWRLLKPLESTFRVH 262
           VFLPTYYSLEQQWRLLKPLESTFRVH
Sbjct: 292 VFLPTYYSLEQQWRLLKPLESTFRVH 317


>ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containing protein 31 [Vitis
           vinifera]
          Length = 1014

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/87 (66%), Positives = 67/87 (77%)
 Frame = +2

Query: 2   SYLDQVAESLGISSETMHSKYSQRLDPSKSNAYIKSELHMLIHDLVLHIHENEPDIEKSI 181
           SYL+QV E LGI+SE + ++Y     PS  NA IK E+H LIHDLVL IH+NE DIEKSI
Sbjct: 210 SYLEQVTELLGINSE-LSTRYLSGPSPSMDNADIKPEVHKLIHDLVLKIHKNELDIEKSI 268

Query: 182 LVFLPTYYSLEQQWRLLKPLESTFRVH 262
           LVFLPTY SLEQQW LLKPL S F++H
Sbjct: 269 LVFLPTYQSLEQQWYLLKPLSSCFKIH 295


>emb|CBI36846.3| unnamed protein product [Vitis vinifera]
          Length = 1007

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/87 (66%), Positives = 67/87 (77%)
 Frame = +2

Query: 2   SYLDQVAESLGISSETMHSKYSQRLDPSKSNAYIKSELHMLIHDLVLHIHENEPDIEKSI 181
           SYL+QV E LGI+SE + ++Y     PS  NA IK E+H LIHDLVL IH+NE DIEKSI
Sbjct: 210 SYLEQVTELLGINSE-LSTRYLSGPSPSMDNADIKPEVHKLIHDLVLKIHKNELDIEKSI 268

Query: 182 LVFLPTYYSLEQQWRLLKPLESTFRVH 262
           LVFLPTY SLEQQW LLKPL S F++H
Sbjct: 269 LVFLPTYQSLEQQWYLLKPLSSCFKIH 295


>ref|XP_004172705.1| PREDICTED: zinc finger CCCH domain-containing protein 4-like,
           partial [Cucumis sativus]
          Length = 432

 Score =  108 bits (271), Expect = 3e-22
 Identities = 55/87 (63%), Positives = 66/87 (75%)
 Frame = +2

Query: 2   SYLDQVAESLGISSETMHSKYSQRLDPSKSNAYIKSELHMLIHDLVLHIHENEPDIEKSI 181
           SYL++V E LGI S+   S+Y     P  S A IKSE+H LIH+L+LHIH+NE DIEKSI
Sbjct: 213 SYLEEVTELLGIESDLQSSRYCNGFSPCASPAEIKSEVHRLIHNLLLHIHKNESDIEKSI 272

Query: 182 LVFLPTYYSLEQQWRLLKPLESTFRVH 262
           LVFLPTYYSLEQQW LLK   S+F+V+
Sbjct: 273 LVFLPTYYSLEQQWHLLKS-HSSFKVY 298


>ref|XP_002882127.1| zinc finger helicase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297327966|gb|EFH58386.1| zinc finger helicase
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1015

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/86 (62%), Positives = 64/86 (74%)
 Frame = +2

Query: 5   YLDQVAESLGISSETMHSKYSQRLDPSKSNAYIKSELHMLIHDLVLHIHENEPDIEKSIL 184
           YL+QVA  LG+SS+   S Y     PS ++A IK EL  LIHDL+L+IHE EPDIEKSIL
Sbjct: 217 YLEQVAGLLGMSSD--FSAYCPGPSPSSADAEIKPELQNLIHDLILYIHEKEPDIEKSIL 274

Query: 185 VFLPTYYSLEQQWRLLKPLESTFRVH 262
           VFLPTYYSLEQQW  L+P  ++F VH
Sbjct: 275 VFLPTYYSLEQQWHQLEPFRASFEVH 300


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