BLASTX nr result

ID: Glycyrrhiza24_contig00014866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014866
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly...   274   1e-71
ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g...   256   3e-66
emb|CBI22162.3| unnamed protein product [Vitis vinifera]              242   4e-62
emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]   238   8e-61
ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c...   237   2e-60

>ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max]
          Length = 501

 Score =  274 bits (700), Expect = 1e-71
 Identities = 147/237 (62%), Positives = 169/237 (71%), Gaps = 19/237 (8%)
 Frame = +1

Query: 4   STAAPATTITDLNEDSMAHCATYLTLRDVCNLAMTSTSLKRLAYSDSVWQHLFTERWHQR 183
           S A PATTITDLNED +AHCA +L+L DVCN+AMTS++LKRLAYSD +WQ  F E WH  
Sbjct: 7   SPATPATTITDLNEDCIAHCAGHLSLGDVCNMAMTSSALKRLAYSDFIWQRFFREHWHLE 66

Query: 184 LPL----SGTVTGARELYLTRRTALQQXXXXXXXXXXXXXY-KPFNHLLLHQNRIFFTQ- 345
           LP     +G   GAR +Y+ R  AL+Q             + KPF+ LLLH+N +F++Q 
Sbjct: 67  LPWHSSGNGGGGGARGVYMVRHAALRQFKFVDPFVLDFDAHAKPFDQLLLHKNHLFYSQQ 126

Query: 346 GSIVEIIDLDG-YQKGGKGFVHTLSDHKARITCMRLFSL------------GEQNVLVTS 486
           GS VE+IDLDG  ++    F H+L  HKARITCMRLF L            GEQNVLVTS
Sbjct: 127 GSRVEVIDLDGCLKRTTTDFFHSLCYHKARITCMRLFPLNEMTSVFRGDTQGEQNVLVTS 186

Query: 487 SCDHSIRLWWKGSCLRCLRGHNGPVLSLSNKLLGDDSSKVLASGGEDGTVRLWSLSS 657
           SCDHSIRLWWKGS LRC RGHNGPVLSLSNKLLG+D SKVLASGGEDGTVRLWSL S
Sbjct: 187 SCDHSIRLWWKGSSLRCFRGHNGPVLSLSNKLLGEDGSKVLASGGEDGTVRLWSLGS 243


>ref|XP_002324039.1| f-box family protein [Populus trichocarpa]
           gi|222867041|gb|EEF04172.1| f-box family protein
           [Populus trichocarpa]
          Length = 498

 Score =  256 bits (654), Expect = 3e-66
 Identities = 138/236 (58%), Positives = 164/236 (69%), Gaps = 17/236 (7%)
 Frame = +1

Query: 1   PSTAAPATTITDLNEDSMAHCATYLTLRDVCNLAMTSTSLKRLAYSDSVWQHLFTERWHQ 180
           PS+ A  T ITDLNEDS+AHCATYL+L+D+ NLA T  SLKR+AYSD +WQH F E W +
Sbjct: 5   PSSTATTTRITDLNEDSLAHCATYLSLQDLSNLATTCKSLKRVAYSDPIWQHCFREHWPR 64

Query: 181 RLPLSGTVTGARELYLTRRTALQQXXXXXXXXXXXXXY--KPFNHLLLHQNRIFFTQGS- 351
            L  +   +G RE YL RR A+QQ                KPF+H++L +N I F+QGS 
Sbjct: 65  ELLQT---SGLREAYLKRRVAVQQFKFVDPLVADLYITGAKPFDHIILDKNDISFSQGSY 121

Query: 352 ---IVEIIDLDGYQKGGKGFVHTLSDHKARITCMRLFSLGE-----------QNVLVTSS 489
              +V++ ++D +  G  G V  LSDH ARITCMRLF L E           +NVLVTSS
Sbjct: 122 PGSLVQMTNIDSFLNGRDG-VTALSDHNARITCMRLFPLSETSLFRSETQRKENVLVTSS 180

Query: 490 CDHSIRLWWKGSCLRCLRGHNGPVLSLSNKLLGDDSSKVLASGGEDGTVRLWSLSS 657
           CDHSIRLWWKGSC RC RGHNGPVL+LS+KLLGD S+KVLASGGEDGTVRLWSLSS
Sbjct: 181 CDHSIRLWWKGSCQRCFRGHNGPVLTLSDKLLGDGSAKVLASGGEDGTVRLWSLSS 236


>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  242 bits (618), Expect = 4e-62
 Identities = 130/227 (57%), Positives = 157/227 (69%), Gaps = 14/227 (6%)
 Frame = +1

Query: 19  ATTITDLNEDSMAHCATYLTLRDVCNLAMTSTSLKRLAYSDSVWQHLFTERWHQRLPLS- 195
           +TTITDL+ DS+A C  YL L+D+ N+AM+   LK +AYSDS+WQ  F+E W  ++P + 
Sbjct: 4   STTITDLDADSLAECGRYLDLQDLSNMAMSCKFLKTVAYSDSIWQRWFSEHWPLQMPSTF 63

Query: 196 GTVTGARELYLTRRTALQQXXXXXXXXXXXXX-YKPFNHLLLHQNR-IFFTQGSIVEIID 369
              +G RE YL RRTAL+Q               KPFNHLLL +N  I F+QGS+++I+ 
Sbjct: 64  SQASGVRESYLARRTALRQFKFVDPLAAQFHTDAKPFNHLLLDKNNDIIFSQGSVIQIMK 123

Query: 370 LDGYQKGGKGFVHTLSDHKARITCMRLFSLGE-----------QNVLVTSSCDHSIRLWW 516
           + G    G+ FV TL+DH ARITCMRLF L E           +NVLVTSSCDHSIRLWW
Sbjct: 124 M-GSIFSGRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREENVLVTSSCDHSIRLWW 182

Query: 517 KGSCLRCLRGHNGPVLSLSNKLLGDDSSKVLASGGEDGTVRLWSLSS 657
           KGSC RC RGHNGPV +LS+KLLGD S KV ASGGEDGTVRLWSLSS
Sbjct: 183 KGSCQRCFRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTVRLWSLSS 229


>emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]
          Length = 491

 Score =  238 bits (607), Expect = 8e-61
 Identities = 129/227 (56%), Positives = 156/227 (68%), Gaps = 14/227 (6%)
 Frame = +1

Query: 19  ATTITDLNEDSMAHCATYLTLRDVCNLAMTSTSLKRLAYSDSVWQHLFTERWHQRLPLS- 195
           +TTITDL+ DS+A    YL L+D+ N+AM+   LK +AYSDS+WQ  F+E W  ++P + 
Sbjct: 4   STTITDLDADSLAEYGRYLDLQDLSNMAMSCKFLKTVAYSDSIWQRWFSEHWPLQMPSTF 63

Query: 196 GTVTGARELYLTRRTALQQXXXXXXXXXXXXX-YKPFNHLLLHQNR-IFFTQGSIVEIID 369
              +G RE YL RRTAL+Q               KPFNHLLL +N  I F+QGS+++I+ 
Sbjct: 64  SQASGVRESYLARRTALRQFKFVDPLAAQFHTDAKPFNHLLLDKNNDIIFSQGSVIQIMK 123

Query: 370 LDGYQKGGKGFVHTLSDHKARITCMRLFSLGE-----------QNVLVTSSCDHSIRLWW 516
           + G    G+ FV TL+DH ARITCMRLF L E           +NVLVTSSCDHSIRLWW
Sbjct: 124 M-GSIFSGRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREENVLVTSSCDHSIRLWW 182

Query: 517 KGSCLRCLRGHNGPVLSLSNKLLGDDSSKVLASGGEDGTVRLWSLSS 657
           KGSC RC RGHNGPV +LS+KLLGD S KV ASGGEDGTVRLWSLSS
Sbjct: 183 KGSCQRCFRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTVRLWSLSS 229


>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
          Length = 494

 Score =  237 bits (604), Expect = 2e-60
 Identities = 130/230 (56%), Positives = 157/230 (68%), Gaps = 17/230 (7%)
 Frame = +1

Query: 19  ATTITDLNEDSMAHCATYLTLRDVCNLAMTSTSLKRLAYSDSVWQHLFTERWHQRLPLS- 195
           +TTITDL+ DS+A C  YL L+D+ N+AM+   LK +AYSDS+WQ  F+E W  ++P + 
Sbjct: 4   STTITDLDADSLAECGRYLDLQDLSNMAMSCKFLKTVAYSDSIWQRWFSEHWPLQMPSTF 63

Query: 196 GTVTGARELYLTRRTALQQXXXXXXXXXXXXX-YKPFNHLLLHQNR-IFFTQ---GSIVE 360
              +G RE YL RRTAL+Q               KPFNHLLL +N  I F+Q   GS+++
Sbjct: 64  SQASGVRESYLARRTALRQFKFVDPLAAQFHTDAKPFNHLLLDKNNDIIFSQVYRGSVIQ 123

Query: 361 IIDLDGYQKGGKGFVHTLSDHKARITCMRLFSLGE-----------QNVLVTSSCDHSIR 507
           I+ + G    G+ FV TL+DH ARITCMRLF L E           +NVLVTSSCDHSIR
Sbjct: 124 IMKM-GSIFSGRDFVVTLNDHNARITCMRLFPLSETSLFRSETQREENVLVTSSCDHSIR 182

Query: 508 LWWKGSCLRCLRGHNGPVLSLSNKLLGDDSSKVLASGGEDGTVRLWSLSS 657
           LWWKGSC RC RGHNGPV +LS+KLLGD S KV ASGGEDGTVRLWSLSS
Sbjct: 183 LWWKGSCQRCFRGHNGPVSTLSDKLLGDGSGKVFASGGEDGTVRLWSLSS 232


Top