BLASTX nr result

ID: Glycyrrhiza24_contig00014862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014862
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601293.1| Pentatricopeptide repeat-containing protein,...   133   1e-29
ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23
ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|XP_002511467.1| pentatricopeptide repeat-containing protein,...   102   4e-20

>ref|XP_003601293.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355490341|gb|AES71544.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 317

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/75 (81%), Positives = 70/75 (93%)
 Frame = +2

Query: 2   KHLDRHKTYIHSSSGFDNAIDIAARMRDYNTAWALVGRMRALRRGPTPRTFAIIAERYAT 181
           KHLDRH TYIHS S F++A+DIAAR+R+YNTAWAL+GRMRALR GPTP+TFAI+AERYAT
Sbjct: 88  KHLDRHPTYIHSISSFEHAVDIAARLREYNTAWALMGRMRALRLGPTPKTFAILAERYAT 147

Query: 182 GGKAHRAVKVFLCMH 226
           GGKAH+AVKVFL MH
Sbjct: 148 GGKAHKAVKVFLSMH 162


>ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Glycine max]
          Length = 492

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/76 (71%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
 Frame = +2

Query: 2   KHLDRH-KTYIHSSSGFDNAIDIAARMRDYNTAWALVGRMRALRRGPTPRTFAIIAERYA 178
           KHLDRH  +Y HS S FD+A+DIAARMRD+N+AWALVGRMR+LR GP+P+T AI+AERYA
Sbjct: 88  KHLDRHLPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYA 147

Query: 179 TGGKAHRAVKVFLCMH 226
           + GK HRAV+ FL MH
Sbjct: 148 SIGKPHRAVRTFLSMH 163


>ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Glycine max]
          Length = 495

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/75 (70%), Positives = 64/75 (85%), Gaps = 1/75 (1%)
 Frame = +2

Query: 2   KHLDRHK-TYIHSSSGFDNAIDIAARMRDYNTAWALVGRMRALRRGPTPRTFAIIAERYA 178
           KHLDRH  +Y HS S FD+A+DIAARMRD+N+AWALVGRMR+LR GP+P+T AI+AERYA
Sbjct: 91  KHLDRHHPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYA 150

Query: 179 TGGKAHRAVKVFLCM 223
           + GK HRAV+ FL M
Sbjct: 151 SNGKPHRAVRTFLSM 165


>ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
           gi|449487784|ref|XP_004157799.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/74 (66%), Positives = 57/74 (77%)
 Frame = +2

Query: 2   KHLDRHKTYIHSSSGFDNAIDIAARMRDYNTAWALVGRMRALRRGPTPRTFAIIAERYAT 181
           KHL+ H +Y HS+S FD+AIDIA RMRDY T WALV RMRA R GP+ +TFAIIAER+  
Sbjct: 100 KHLEYHPSYAHSASSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVA 159

Query: 182 GGKAHRAVKVFLCM 223
            GK  RA+KVFL M
Sbjct: 160 AGKPDRAIKVFLSM 173


>ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550582|gb|EEF52069.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 482

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/75 (64%), Positives = 56/75 (74%)
 Frame = +2

Query: 2   KHLDRHKTYIHSSSGFDNAIDIAARMRDYNTAWALVGRMRALRRGPTPRTFAIIAERYAT 181
           K L  H +Y H +S FD+AIDI AR+RD+ T W LV RMR+ R GP+PRTFAIIAERYA 
Sbjct: 80  KILSHHPSYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAA 139

Query: 182 GGKAHRAVKVFLCMH 226
            GK HRAV VF+ MH
Sbjct: 140 MGKPHRAVTVFMSMH 154


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