BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014820
         (833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522936.1| PREDICTED: pentatricopeptide repeat-containi...   305   9e-83
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,...   281   3e-76
ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containi...   280   1e-75
ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi...   274   9e-74
ref|XP_003595651.1| Pentatricopeptide repeat-containing protein ...   259   4e-69

>ref|XP_003522936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Glycine max]
          Length = 854

 Score =  305 bits (780), Expect(2) = 9e-83
 Identities = 160/249 (64%), Positives = 194/249 (77%), Gaps = 2/249 (0%)
 Frame = -3

Query: 798 ADVDFSPSLQLSTVQCNAILKRLQRNADDA-KTLSFFNQMKKTGKLEHNADAYNTAIRAL 622
           ADVDFSP  +LST  CNAILKRL+ +A  A KTLSFF +M+ TGKLE NA AYN  +R L
Sbjct: 78  ADVDFSP--ELSTEHCNAILKRLEASAAAADKTLSFFERMRATGKLERNAAAYNVMLRFL 135

Query: 621 TNREDWEGAEKLVHEMS-TNLLNFRVFNTVIYACSKRGLVSLGAKWFRKMLELNVTPNTA 445
           + R+DWEGAEKL++EM  + L++   FNT+IYAC K+ LV LG KWFR ML+  V PN A
Sbjct: 136 SRRQDWEGAEKLIYEMKGSELISCNAFNTLIYACCKQSLVQLGTKWFRMMLDCGVVPNVA 195

Query: 444 TFGMVMGLYRKGWEVEEAEFAMSQMKQLGIVCESAYSSMVTIYTRLGLYEKAESVIESME 265
           T GM+MGLYRKGW +EEAEFA S+M+   IVCESAYSSM+TIYTRL LYEKAE VIE M 
Sbjct: 196 TIGMLMGLYRKGWNLEEAEFAFSRMRGFRIVCESAYSSMITIYTRLRLYEKAEGVIELMR 255

Query: 264 SEGVVVKNLENWLVVLNAYCQQGKMVESERVLERMIEELGFCPNVVANNTMITGYGKASD 85
            +  VV NLENWLV+LNAY QQGK+ ++ERVLE M +E GF  N+VA NTMITG+GKA  
Sbjct: 256 KD-EVVPNLENWLVMLNAYSQQGKLGDAERVLEAM-QEAGFSDNIVAFNTMITGFGKARR 313

Query: 84  MESAERVFV 58
           M++A+R+F+
Sbjct: 314 MDAAQRLFM 322



 Score = 29.3 bits (64), Expect(2) = 9e-83
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -2

Query: 49  CFGLEPDETSYRSMIE 2
           C  ++PDET+YRSMIE
Sbjct: 327 CLEVDPDETTYRSMIE 342


>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 955

 Score =  281 bits (719), Expect(2) = 3e-76
 Identities = 144/250 (57%), Positives = 184/250 (73%), Gaps = 4/250 (1%)
 Frame = -3

Query: 795 DVDFSP-SLQLSTVQCNAILKRLQRNADDAKTLSFFNQMKKTGKLEHNADAYNTAIRALT 619
           DV++S     LS   CN ILKRL+R + D K+L FF  M+  GKLE N +AYN  +R L 
Sbjct: 177 DVNYSVIHCNLSLEHCNLILKRLERCSSDDKSLRFFEWMRNNGKLEKNLNAYNVILRVLG 236

Query: 618 NREDWEGAEKLVHEMSTNL---LNFRVFNTVIYACSKRGLVSLGAKWFRKMLELNVTPNT 448
            REDW  AE+++ E+S +    L+FRVFNT+IYACS+RG + LG KWFR MLEL V PN 
Sbjct: 237 RREDWGTAERMIGEVSDSFGSELDFRVFNTLIYACSRRGNMLLGGKWFRMMLELGVQPNI 296

Query: 447 ATFGMVMGLYRKGWEVEEAEFAMSQMKQLGIVCESAYSSMVTIYTRLGLYEKAESVIESM 268
           ATFGM+MGLY+KGW VEEAEF  S+M+  GI+C+SAYS+M+TIYTRL LY KAE +I  M
Sbjct: 297 ATFGMLMGLYQKGWNVEEAEFVFSKMRSFGIICQSAYSAMITIYTRLSLYNKAEEIIGLM 356

Query: 267 ESEGVVVKNLENWLVVLNAYCQQGKMVESERVLERMIEELGFCPNVVANNTMITGYGKAS 88
             E  V  N+ENWLV+LNAY QQG++ E+E+VL  M +E  F PN+VA NT+ITGYGK S
Sbjct: 357 -GEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEM-QEASFSPNIVAFNTLITGYGKLS 414

Query: 87  DMESAERVFV 58
           +M +A+R+F+
Sbjct: 415 NMAAAQRLFL 424



 Score = 31.2 bits (69), Expect(2) = 3e-76
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -2

Query: 43  GLEPDETSYRSMIE 2
           GLEPDET+YRSMIE
Sbjct: 430 GLEPDETTYRSMIE 443



 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 38/152 (25%), Positives = 81/152 (53%)
 Frame = -3

Query: 549  VFNTVIYACSKRGLVSLGAKWFRKMLELNVTPNTATFGMVMGLYRKGWEVEEAEFAMSQM 370
            ++N +I  C++   V   ++ F +ML+   +PNT TF +++ +Y K     +A+      
Sbjct: 717  LYNCIINCCARALPVGELSRLFSEMLQRGFSPNTITFNVMLDVYGKAKLFNKAKELFWMA 776

Query: 369  KQLGIVCESAYSSMVTIYTRLGLYEKAESVIESMESEGVVVKNLENWLVVLNAYCQQGKM 190
            ++ G+V   +Y++++  Y     ++   S + +M+ +G  V +LE +  +L+ Y ++G+M
Sbjct: 777  RKRGLVDVISYNTVIAAYGHNKDFKNMASAVRNMQFDGFSV-SLEAYNCMLDGYGKEGQM 835

Query: 189  VESERVLERMIEELGFCPNVVANNTMITGYGK 94
                 VL+RM ++  +  +    N MI  YG+
Sbjct: 836  ECFRNVLQRM-KQSSYTSDHYTYNIMINIYGE 866


>ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Cucumis sativus]
          Length = 894

 Score =  280 bits (716), Expect(2) = 1e-75
 Identities = 142/250 (56%), Positives = 186/250 (74%), Gaps = 4/250 (1%)
 Frame = -3

Query: 795 DVDFSP-SLQLSTVQCNAILKRLQRNADDAKTLSFFNQMKKTGKLEHNADAYNTAIRALT 619
           DV++S  S  LS   CNAILKRL++  +D+KTL FF  M+  GKL+HN  AYN  +R L 
Sbjct: 117 DVNYSTISSDLSLEDCNAILKRLEK-CNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLG 175

Query: 618 NREDWEGAEKLVHEMSTNL---LNFRVFNTVIYACSKRGLVSLGAKWFRKMLELNVTPNT 448
            +EDW+ AEKL+ E+   L   L+F+VFNT+IYAC K   V  G KWFR MLE  V PN 
Sbjct: 176 RQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNV 235

Query: 447 ATFGMVMGLYRKGWEVEEAEFAMSQMKQLGIVCESAYSSMVTIYTRLGLYEKAESVIESM 268
           ATFGM+MGLY+K  +++E+EFA +QM+  GIVCE+AY+SM+TIY R+ LY+KAE VI+ M
Sbjct: 236 ATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLM 295

Query: 267 ESEGVVVKNLENWLVVLNAYCQQGKMVESERVLERMIEELGFCPNVVANNTMITGYGKAS 88
           + E  V+ NLENW+V+LNAYCQQGKM E+E V   M EE GF  N++A NT+ITGYGKAS
Sbjct: 296 Q-EDKVIPNLENWVVMLNAYCQQGKMEEAELVFASM-EEAGFSSNIIAYNTLITGYGKAS 353

Query: 87  DMESAERVFV 58
           +M++A+R+F+
Sbjct: 354 NMDTAQRLFL 363



 Score = 30.0 bits (66), Expect(2) = 1e-75
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = -2

Query: 43  GLEPDETSYRSMIE 2
           G+EPDET+YRSMIE
Sbjct: 369 GVEPDETTYRSMIE 382



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 43/162 (26%), Positives = 82/162 (50%)
 Frame = -3

Query: 549  VFNTVIYACSKRGLVSLGAKWFRKMLELNVTPNTATFGMVMGLYRKGWEVEEAEFAMSQM 370
            ++N VI  CS+   V   ++ F +ML+    PNT T  +++ +Y K     +A       
Sbjct: 656  MYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLA 715

Query: 369  KQLGIVCESAYSSMVTIYTRLGLYEKAESVIESMESEGVVVKNLENWLVVLNAYCQQGKM 190
            ++ G+V   +Y++M+++Y +   ++   S ++ M+  G  V +LE +  +L+AY ++ +M
Sbjct: 716  QKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSV-SLEAYNCMLDAYGKECQM 774

Query: 189  VESERVLERMIEELGFCPNVVANNTMITGYGKASDMESAERV 64
                 VL+RM E    C +    N MI  YG+   ++    V
Sbjct: 775  ENFRSVLQRMQETSSECDH-YTYNIMINIYGEQGWIDEVAEV 815


>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Vitis vinifera]
           gi|297745081|emb|CBI38673.3| unnamed protein product
           [Vitis vinifera]
          Length = 900

 Score =  274 bits (701), Expect(2) = 9e-74
 Identities = 139/252 (55%), Positives = 186/252 (73%), Gaps = 4/252 (1%)
 Frame = -3

Query: 804 DAADV-DFSPSLQLSTVQCNAILKRLQRNADDAKTLSFFNQMKKTGKLEHNADAYNTAIR 628
           D  DV ++    +LS  +CNAILK L+R   D+KT+ FF  M++ GKLE N  AYN A+R
Sbjct: 122 DEIDVNEYGIGPELSVERCNAILKGLER-CSDSKTMKFFEWMRENGKLEGNVSAYNLALR 180

Query: 627 ALTNREDWEGAEKLVHEMSTNL---LNFRVFNTVIYACSKRGLVSLGAKWFRKMLELNVT 457
            L  R DW+ AE ++ EM+ +    +NF+V+NT+IYAC K+G V LG KWFR MLE  V 
Sbjct: 181 VLGRRGDWDAAETMIWEMNGDSDCQVNFQVYNTLIYACYKQGHVELGTKWFRLMLENGVR 240

Query: 456 PNTATFGMVMGLYRKGWEVEEAEFAMSQMKQLGIVCESAYSSMVTIYTRLGLYEKAESVI 277
           PN ATFGMVM LY+KGW V ++E+A SQM+  GI C+SAYS+M+TIYTR+ LY+KAE VI
Sbjct: 241 PNVATFGMVMSLYQKGWNVADSEYAFSQMRSFGITCQSAYSAMITIYTRMSLYDKAEEVI 300

Query: 276 ESMESEGVVVKNLENWLVVLNAYCQQGKMVESERVLERMIEELGFCPNVVANNTMITGYG 97
           + ++ + V++ NLENWLV+LNAY QQGK+ E+ERVL  M +  GF PN+VA N +ITGYG
Sbjct: 301 DFIQEDKVIL-NLENWLVLLNAYSQQGKLQEAERVLFSM-QNAGFSPNIVAYNMLITGYG 358

Query: 96  KASDMESAERVF 61
           KAS+M++A+ +F
Sbjct: 359 KASNMDAAQHIF 370



 Score = 29.6 bits (65), Expect(2) = 9e-74
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = -2

Query: 43  GLEPDETSYRSMIE 2
           GLEPDE++YRSMIE
Sbjct: 377 GLEPDESTYRSMIE 390


>ref|XP_003595651.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484699|gb|AES65902.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  259 bits (662), Expect(2) = 4e-69
 Identities = 132/204 (64%), Positives = 159/204 (77%), Gaps = 6/204 (2%)
 Frame = -3

Query: 642 NTAIRALTNREDWEGAEKLVHEM-----STNLLNFRVFNTVIYACSKRGLVSLGAKWFRK 478
           + +IRALT ++DWE AE L+ ++     S   L +++FNT+IYA SKRGLV L +KWFR 
Sbjct: 51  HASIRALTKKQDWETAENLLRKIILASDSEPQLTYQIFNTLIYASSKRGLVKLTSKWFRM 110

Query: 477 MLELNVTPNTATFGMVMGLYRKGWEVEEAEFAMSQMKQLGIVCESAYSSMVTIYTRLGLY 298
           ML+ NVTPN ATFGM+M LY+K W VEEAEF MS MK+  +VCESAYSSM+TIYTRLGLY
Sbjct: 111 MLDCNVTPNVATFGMLMRLYQKNWNVEEAEFVMSHMKRFSVVCESAYSSMITIYTRLGLY 170

Query: 297 EKAESVIESMESEGVVVKNLENWLVVLNAYCQQGKMVESERVLERMIEELGFC-PNVVAN 121
            KAESV+E ME E V+V N+ENWLV+LN YCQQGKMVE+ERVL  M EE GFC  N+V  
Sbjct: 171 AKAESVVELMEKE-VMVLNVENWLVILNLYCQQGKMVEAERVLAIMEEEAGFCVENIVVY 229

Query: 120 NTMITGYGKASDMESAERVFVSFG 49
           NTMITGYGKAS+M+ AE VF+  G
Sbjct: 230 NTMITGYGKASNMDGAESVFLRLG 253



 Score = 29.3 bits (64), Expect(2) = 4e-69
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -2

Query: 40  LEPDETSYRSMIE 2
           +EPDETSYRSMIE
Sbjct: 256 IEPDETSYRSMIE 268