BLASTX nr result

ID: Glycyrrhiza24_contig00014780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014780
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522010.1| PREDICTED: scarecrow-like protein 6-like [Gl...   193   6e-47
ref|XP_003516440.1| PREDICTED: scarecrow-like protein 6-like [Gl...   192   1e-46
ref|XP_002326988.1| GRAS family transcription factor [Populus tr...    97   6e-18
ref|XP_002301269.1| GRAS family transcription factor [Populus tr...    93   1e-16
ref|XP_002302518.1| GRAS family transcription factor [Populus tr...    89   1e-15

>ref|XP_003522010.1| PREDICTED: scarecrow-like protein 6-like [Glycine max]
          Length = 732

 Score =  193 bits (490), Expect = 6e-47
 Identities = 133/279 (47%), Positives = 153/279 (54%), Gaps = 16/279 (5%)
 Frame = -2

Query: 790 MPLPFEGFQGKGLVLDFSSASDSSFPLLLHQQQQKWTIVGKEDCYVVGITEPTSVLDXXX 611
           MPLPFE FQGKG VLDFSSASDS F +LLH  Q KWTI  ++ CYV  ITEPTSVL    
Sbjct: 4   MPLPFEEFQGKG-VLDFSSASDS-FSVLLHNPQPKWTIDKEDYCYVGSITEPTSVLGSRR 61

Query: 610 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKVSENPLP------HEPSLENSPEK 449
                                                + NP P      + P  E+SPEK
Sbjct: 62  SLSPPTSSSTMSSSLGSSNNSTSKGGGGTSA----NTTNNPTPPSDYNNNNPPQESSPEK 117

Query: 448 CGGGMRMEEWDGQDQSLLRLIMGDVEDPSAGLNKLLXXXXXXXXXXXSXXXXXXXXXXXX 269
           CG  +RME+W+ QDQS+LRLIMGDVEDPSAGL+KLL                        
Sbjct: 118 CG--IRMEDWECQDQSILRLIMGDVEDPSAGLSKLLQSTACGSQSADFNAGFGVVDQQGL 175

Query: 268 XXXXXXGLNMDQGN---NYP-GFPFISENLDGHN------NAKVSESIFSVSGNNYPSLL 119
                  +NM  GN   NYP GFPFI+EN+DG N        +VSES+   S NN   + 
Sbjct: 176 NMNMN--MNMVGGNIDPNYPAGFPFIAENMDGQNAKAGSGTGQVSESVV-FSANNPLMVS 232

Query: 118 ASASPGVFSPQHQQHQEFGVVDEKPQVINPQFLLNHNQV 2
           +S SPGVF+ Q QQ QEFGVVDEKPQVINPQF+LN NQV
Sbjct: 233 SSVSPGVFTSQQQQ-QEFGVVDEKPQVINPQFMLNQNQV 270


>ref|XP_003516440.1| PREDICTED: scarecrow-like protein 6-like [Glycine max]
          Length = 737

 Score =  192 bits (487), Expect = 1e-46
 Identities = 130/277 (46%), Positives = 149/277 (53%), Gaps = 13/277 (4%)
 Frame = -2

Query: 793 AMPLPFEGFQGKGLVLDFSSASDSSFPLLLHQQQQKWTIVGKEDCYVVGITEPTSVLDXX 614
           AMPLPFE FQGKG VLDFSSASD  F +LLH  Q KWT    + CYV   TEPTSVLD  
Sbjct: 3   AMPLPFEEFQGKG-VLDFSSASDL-FSVLLHHPQPKWTTDKADYCYVGSSTEPTSVLDSR 60

Query: 613 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKVSENPLP------HEPSLENSPE 452
                                             A   + NP P      + P  E+SPE
Sbjct: 61  RSPSPPTSSSTMSSSLGSSSNNSTSKGGGGSGTSA-NTTTNPTPPSGNNNNNPPQESSPE 119

Query: 451 KCGGGMRMEEWDGQDQSLLRLIMGDVEDPSAGLNKLLXXXXXXXXXXXSXXXXXXXXXXX 272
           KCG  +RME+W+GQDQS+LRLIMGDVEDPSAGL+KLL                       
Sbjct: 120 KCG--IRMEDWEGQDQSILRLIMGDVEDPSAGLSKLLQSTACGSQSVDFNAGFGVVDQQG 177

Query: 271 XXXXXXXGLNMDQGNNYP-GFPFISENLDGHN------NAKVSESIFSVSGNNYPSLLAS 113
                    + +   NYP GFPFI+EN+DG N        +VSES+   SGNN   +  S
Sbjct: 178 LNMNMNMVSSGNIDQNYPAGFPFIAENIDGQNAKAGSGTGQVSESVV-FSGNNPLMVSTS 236

Query: 112 ASPGVFSPQHQQHQEFGVVDEKPQVINPQFLLNHNQV 2
            SPGVF+   QQ QEFGVVDEKPQVINPQF+LN NQV
Sbjct: 237 VSPGVFT--SQQQQEFGVVDEKPQVINPQFMLNQNQV 271


>ref|XP_002326988.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222835303|gb|EEE73738.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 667

 Score = 97.1 bits (240), Expect = 6e-18
 Identities = 92/276 (33%), Positives = 121/276 (43%), Gaps = 13/276 (4%)
 Frame = -2

Query: 793 AMPLPFEGFQGKGLVLDFSSASDSSFPLLLHQQQQKW-TIVGKEDC-YVVGITEPTSVLD 620
           AMPLP E FQGKG VLDFSS++ SS P  L+Q  QKW     KE C + +G  EPTSVLD
Sbjct: 3   AMPLPSEDFQGKG-VLDFSSSTTSS-PNSLYQHHQKWQNNNSKESCGFFLGSAEPTSVLD 60

Query: 619 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKVSENPLPHEPSLENSPEKCGG 440
                                               A   S NP           EKCG 
Sbjct: 61  TISRQSPPTSSSTLSSSQGGGGGGGGASTDTTNDVAAAGGS-NPC--------VDEKCGQ 111

Query: 439 GMRMEEWD-------GQDQSLLRLIMGDVEDPSAGLNKLLXXXXXXXXXXXSXXXXXXXX 281
            + ME+W+        Q+QS+LRLIMGD+EDPS GL+KLL                    
Sbjct: 112 QLGMEDWESVLPGSPSQEQSILRLIMGDIEDPSVGLHKLL-------------------- 151

Query: 280 XXXXXXXXXXGLNMDQGNNYPGFPFISE--NLDGHNNAKVSESIFSVSGNNYPSLLASAS 107
                      L+M+  +   GF  + +    D  + +  S ++ + + N  PS +   +
Sbjct: 152 -----QGGSRSLDMEHAS---GFGVVDQVFGFDVSSMSSASANLVANNNNIDPSSIHGIN 203

Query: 106 --PGVFSPQHQQHQEFGVVDEKPQVINPQFLLNHNQ 5
             PG+F  Q QQ Q     DEKPQ++NP  + N NQ
Sbjct: 204 LLPGLF--QQQQQQAAFDQDEKPQILNPGMISNQNQ 237


>ref|XP_002301269.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222842995|gb|EEE80542.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 732

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 101/300 (33%), Positives = 120/300 (40%), Gaps = 37/300 (12%)
 Frame = -2

Query: 793 AMPLPFEGFQGKGLVLDFSSASDSSFPLLLHQQQQKW-TIVGKEDC-YVVGITEPTSVLD 620
           AMPLPFE FQ KGL L FSS S SS P   HQ   KW     KE C ++VG TEPTSVLD
Sbjct: 3   AMPLPFEDFQAKGL-LGFSSYSSSS-PDPFHQHHHKWQNNNSKESCGFLVGSTEPTSVLD 60

Query: 619 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKVSENPLPHEPSLENSPEKCGG 440
                                                   S       PS++   EKCG 
Sbjct: 61  TISRQSPPTSSSTLSSSQGGGGGGGGASTDTTNGAAGAGGS------SPSVD---EKCGP 111

Query: 439 GMRMEEWDG-------QDQSLLRLIMGDVEDPSAGLNKLLXXXXXXXXXXXSXXXXXXXX 281
            + ME+W+        Q+QS+LRLIMGD+EDPS GL KLL           +        
Sbjct: 112 QLGMEDWESVLSGSPIQEQSILRLIMGDIEDPSLGLYKLLQSGSRSQDMELNASGFGV-- 169

Query: 280 XXXXXXXXXXGLNMDQ--GNNYPGFPFISENLD-GHNN-------------------AKV 167
                        +DQ  G   P     S NL   HNN                   A +
Sbjct: 170 -------------VDQVFGFEVPNMSTASANLAVNHNNFDPSSIHGTSPDFPLVNLKATI 216

Query: 166 SESIFSVSGNN---YPSLLASA---SPGVFSPQHQQHQEFGVVDEKPQVINPQFLLNHNQ 5
           S +I  V   N    P L  S     PG+F  QH Q   F   DEKPQ++NP  ++N NQ
Sbjct: 217 SFNIGCVLNQNPTPNPVLFTSGINLLPGLFQ-QHHQQAAFD-QDEKPQILNPGAMINQNQ 274


>ref|XP_002302518.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222844244|gb|EEE81791.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 602

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 65/159 (40%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
 Frame = -2

Query: 790 MPLPFEGFQGKGLVLDFSSASDSSFPLLLHQQQQKW-TIVGKEDC-YVVGITEPTSVLDX 617
           MPLPFE FQGKGL  DFSS+S +S P   HQ   KW     KE C ++VG TEPTSVLD 
Sbjct: 1   MPLPFENFQGKGLP-DFSSSSTTSSPDPFHQHHHKWQNNDSKESCGFLVGSTEPTSVLDT 59

Query: 616 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKVSENPLPHEPSLENSPEKCGGG 437
                                              A   S       PS++   EKCG  
Sbjct: 60  ISRQSPPTSSSTLSSSQGGGGGGGGASTETTNDVAAACGS------SPSVD---EKCGPQ 110

Query: 436 MRMEEWD-------GQDQSLLRLIMGDVEDPSAGLNKLL 341
           + ME+W+        Q+QS++RLIMGD+EDP+ GLNKLL
Sbjct: 111 LGMEDWESVLSGSPSQEQSIIRLIMGDIEDPALGLNKLL 149


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