BLASTX nr result

ID: Glycyrrhiza24_contig00014778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014778
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37258.1| unknown [Lotus japonicus]                              246   5e-63
ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III s...   246   6e-63
gb|AFK40316.1| unknown [Lotus japonicus]                              242   9e-62
gb|AFK42923.1| unknown [Medicago truncatula]                          239   7e-61
ref|NP_001238744.1| uncharacterized protein LOC100526847 [Glycin...   234   2e-59

>gb|AFK37258.1| unknown [Lotus japonicus]
          Length = 162

 Score =  246 bits (628), Expect = 5e-63
 Identities = 125/161 (77%), Positives = 138/161 (85%)
 Frame = +3

Query: 336 MKILEANAGALTNFEVLDFLRAKGASKDPTRVIAKVAPSEYKVYDYLVNTAASDQTRENI 515
           MKILEANAGALTNFEVLDFLR KGASKDPTRVIAKVA SEYKVYDYLVNTAAS+QTRE+I
Sbjct: 1   MKILEANAGALTNFEVLDFLRGKGASKDPTRVIAKVAQSEYKVYDYLVNTAASNQTRESI 60

Query: 516 NEFLTNVKQHDLAKAEVLNILNIRPAAEVEIFPIIENCEDRFPDEVIAEIVELVKKTLPP 695
           NEF+ +VK+HDLAKAEVLNI+NIRPAA VE+FPIIE CE RFPDE + EIVELVKKTLP 
Sbjct: 61  NEFMASVKKHDLAKAEVLNIINIRPAAAVEMFPIIEECESRFPDEEVTEIVELVKKTLPA 120

Query: 696 PPDKTMPEEITNGDEETAKLKHGKGNEISEDKTEGGEQMDT 818
           PP K    E   G+EETA L+H    ++SED+ EGGEQMDT
Sbjct: 121 PPAKKNVVENPEGNEETATLEHENDTKMSEDQNEGGEQMDT 161


>ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc9-like
           [Glycine max]
          Length = 161

 Score =  246 bits (627), Expect = 6e-63
 Identities = 129/162 (79%), Positives = 145/162 (89%)
 Frame = +3

Query: 336 MKILEANAGALTNFEVLDFLRAKGASKDPTRVIAKVAPSEYKVYDYLVNTAASDQTRENI 515
           MKILE NAGALTNFEVLDFLRAKGASKDPTRVIAKVA SEYKVYDYLV+TAAS QTRE+I
Sbjct: 1   MKILECNAGALTNFEVLDFLRAKGASKDPTRVIAKVAQSEYKVYDYLVDTAASVQTRESI 60

Query: 516 NEFLTNVKQHDLAKAEVLNILNIRPAAEVEIFPIIENCEDRFPDEVIAEIVELVKKTLPP 695
           NEFLT+VKQHDLAKAEVLNILNI PAAEVE++PIIE+C++RF DE + EIVELVKKTLP 
Sbjct: 61  NEFLTSVKQHDLAKAEVLNILNIGPAAEVELYPIIEDCDERFGDEGVLEIVELVKKTLPL 120

Query: 696 PPDKTMPEEITNGDEETAKLKHGKGNEISEDKTEGGEQMDTS 821
           P +    EEIT  DEETA LK+ KGN+IS+D++EGGEQM+TS
Sbjct: 121 PLNMKQ-EEITKVDEETATLKNEKGNQISQDQSEGGEQMNTS 161


>gb|AFK40316.1| unknown [Lotus japonicus]
          Length = 162

 Score =  242 bits (617), Expect = 9e-62
 Identities = 123/161 (76%), Positives = 136/161 (84%)
 Frame = +3

Query: 336 MKILEANAGALTNFEVLDFLRAKGASKDPTRVIAKVAPSEYKVYDYLVNTAASDQTRENI 515
           MKILEANAGALTNFEVLDFLR KGASKDPTRVIAKVA SEYKVYDYLVNTAAS+QTRE+I
Sbjct: 1   MKILEANAGALTNFEVLDFLRGKGASKDPTRVIAKVAQSEYKVYDYLVNTAASNQTRESI 60

Query: 516 NEFLTNVKQHDLAKAEVLNILNIRPAAEVEIFPIIENCEDRFPDEVIAEIVELVKKTLPP 695
           NEF+ +VK+HDLAKAEVLNI+NI PAA VE+FPIIE CE RFPDE + EIVEL KKTLP 
Sbjct: 61  NEFMASVKKHDLAKAEVLNIINITPAAAVEMFPIIEECEPRFPDEEVTEIVELAKKTLPA 120

Query: 696 PPDKTMPEEITNGDEETAKLKHGKGNEISEDKTEGGEQMDT 818
           PP K    E   G+EETA L+H    ++SED+ EGGEQMDT
Sbjct: 121 PPAKKNVVENPEGNEETATLEHENDTKMSEDQNEGGEQMDT 161


>gb|AFK42923.1| unknown [Medicago truncatula]
          Length = 170

 Score =  239 bits (609), Expect = 7e-61
 Identities = 120/164 (73%), Positives = 138/164 (84%)
 Frame = +3

Query: 330 LQMKILEANAGALTNFEVLDFLRAKGASKDPTRVIAKVAPSEYKVYDYLVNTAASDQTRE 509
           L+MKILE NAGALTNFEVLDFLRAKGASKDP+RV+AKVA SEYKVYDYLV T A  QTRE
Sbjct: 10  LEMKILEENAGALTNFEVLDFLRAKGASKDPSRVLAKVAMSEYKVYDYLVKTPAGSQTRE 69

Query: 510 NINEFLTNVKQHDLAKAEVLNILNIRPAAEVEIFPIIENCEDRFPDEVIAEIVELVKKTL 689
           ++ E+ T +KQHDL++AEVLN+LNIRPA+EVEI+ IIE+CE+RFPDE + EIVE V  TL
Sbjct: 70  SVKEYFTAIKQHDLSEAEVLNVLNIRPASEVEIYHIIEDCEERFPDEEVTEIVEKVGNTL 129

Query: 690 PPPPDKTMPEEITNGDEETAKLKHGKGNEISEDKTEGGEQMDTS 821
           P PPDK  PEEIT GDEET   KH   +EIS+D+TE GEQMDTS
Sbjct: 130 PAPPDKATPEEITKGDEETETQKH---DEISQDQTEDGEQMDTS 170


>ref|NP_001238744.1| uncharacterized protein LOC100526847 [Glycine max]
           gi|255630978|gb|ACU15853.1| unknown [Glycine max]
          Length = 161

 Score =  234 bits (597), Expect = 2e-59
 Identities = 123/162 (75%), Positives = 139/162 (85%)
 Frame = +3

Query: 336 MKILEANAGALTNFEVLDFLRAKGASKDPTRVIAKVAPSEYKVYDYLVNTAASDQTRENI 515
           MKILE NAGALTNFEVLDFLRAKGASKDPTRVIAKV+ SEYKVYDYLV+TAAS QTRE+I
Sbjct: 1   MKILEGNAGALTNFEVLDFLRAKGASKDPTRVIAKVSQSEYKVYDYLVDTAASVQTRESI 60

Query: 516 NEFLTNVKQHDLAKAEVLNILNIRPAAEVEIFPIIENCEDRFPDEVIAEIVELVKKTLPP 695
           NEFL +VKQHDLAKAEVLNILNI PAAEVE++PI+E  ++RF DE + EIVELVKK LP 
Sbjct: 61  NEFLRSVKQHDLAKAEVLNILNIGPAAEVELYPILEESDERFGDEGVTEIVELVKKALPL 120

Query: 696 PPDKTMPEEITNGDEETAKLKHGKGNEISEDKTEGGEQMDTS 821
           P +    EEIT GDEETA LK+ KGN+I +D+ E GE+MDTS
Sbjct: 121 PLN-MKKEEITKGDEETATLKNEKGNKIRQDQNEDGEEMDTS 161


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