BLASTX nr result

ID: Glycyrrhiza24_contig00014757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014757
         (868 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629385.1| 50S ribosomal protein L12-2 [Medicago trunca...   221   1e-55
ref|XP_003548867.1| PREDICTED: 50S ribosomal protein L7/L12-like...   216   7e-54
ref|XP_003520283.1| PREDICTED: 54S ribosomal protein L12, mitoch...   203   5e-50
ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitoch...   176   6e-42
ref|XP_003548868.1| PREDICTED: 50S ribosomal protein L7/L12-like...   168   1e-39

>ref|XP_003629385.1| 50S ribosomal protein L12-2 [Medicago truncatula]
           gi|355523407|gb|AET03861.1| 50S ribosomal protein L12-2
           [Medicago truncatula] gi|388508470|gb|AFK42301.1|
           unknown [Medicago truncatula]
          Length = 195

 Score =  221 bits (564), Expect = 1e-55
 Identities = 133/204 (65%), Positives = 149/204 (73%), Gaps = 2/204 (0%)
 Frame = +3

Query: 177 MRHSRFIIHLSRLRKTPTPTQNPKFASPPIPTPYAVSPKPQWLSTIARGYSSASPAEESL 356
           M+ SRF+   S LRKT    QNP F SP IP PY + P P+   +  R Y++ SP  E+ 
Sbjct: 1   MKFSRFL-QFSHLRKTLI--QNPNFLSPQIPKPYIIPPNPK---SHLRNYNTDSPNHEN- 53

Query: 357 KVTAIVDELMGLTVLEVMDLVEVIREKKGANNELPIAMLMVPGMGIRGVPRGVPXXXXXX 536
            V+AIV+EL GLT++E MDLVEV+REKKG N ELPI MLMVPGMGIRG+PRGV       
Sbjct: 54  -VSAIVEELAGLTLIEAMDLVEVMREKKGIN-ELPIMMLMVPGMGIRGMPRGVGGGKGGG 111

Query: 537 XXXXXXXXXXXX--TAFDVKLDGFEAASKIKVIKEVRTFTSLGLKEAKDLVEKVPTLLKK 710
                         TAFDVKLDGF+AASKIKVIKEVR+FTSLGLKEAKDLVEK PTLLKK
Sbjct: 112 GSEKGGEVKKVEEKTAFDVKLDGFDAASKIKVIKEVRSFTSLGLKEAKDLVEKSPTLLKK 171

Query: 711 GVTKEEAETIIAKLKEVGAKASME 782
           GVTKEEAE IIAKLKEVGAKASME
Sbjct: 172 GVTKEEAEGIIAKLKEVGAKASME 195


>ref|XP_003548867.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 194

 Score =  216 bits (549), Expect = 7e-54
 Identities = 128/202 (63%), Positives = 143/202 (70%)
 Frame = +3

Query: 177 MRHSRFIIHLSRLRKTPTPTQNPKFASPPIPTPYAVSPKPQWLSTIARGYSSASPAEESL 356
           MR+     HLS   KT T  QNP F SP I    + +P+P          SSAS ++ S 
Sbjct: 1   MRYYSQFKHLSHFLKTLTRPQNPTFVSPRI----SQNPRPLPFHARECSSSSASQSQGSE 56

Query: 357 KVTAIVDELMGLTVLEVMDLVEVIREKKGANNELPIAMLMVPGMGIRGVPRGVPXXXXXX 536
           KV AIVDELMGLT+LEVMDLVEV+REK+G N ELPIAMLMVPGMG   VPRGVP      
Sbjct: 57  KVAAIVDELMGLTLLEVMDLVEVMREKRGVN-ELPIAMLMVPGMG---VPRGVPNGGGGG 112

Query: 537 XXXXXXXXXXXXTAFDVKLDGFEAASKIKVIKEVRTFTSLGLKEAKDLVEKVPTLLKKGV 716
                       T FDVKL+GF+AA+KIKVIKEVRTFTSLGLKEAKDLVEKVP +LKKGV
Sbjct: 113 AAGVAEVKAVEKTVFDVKLEGFDAATKIKVIKEVRTFTSLGLKEAKDLVEKVPAMLKKGV 172

Query: 717 TKEEAETIIAKLKEVGAKASME 782
           TKEEAE+IIAK+KEVGAK SME
Sbjct: 173 TKEEAESIIAKMKEVGAKVSME 194


>ref|XP_003520283.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Glycine
           max]
          Length = 199

 Score =  203 bits (516), Expect = 5e-50
 Identities = 129/207 (62%), Positives = 146/207 (70%), Gaps = 5/207 (2%)
 Frame = +3

Query: 177 MRHSRFIIHLSRLRKTPTPT-QNPKFASPPIPTPYAVSPKPQWLSTIARGYSS---ASPA 344
           MR+     HLS   KT T   QNP FAS  I     + P+P      AR Y S   AS +
Sbjct: 1   MRYYSQFKHLSHFLKTLTRRPQNPTFASARISQN--LPPRPSH----ARDYCSSGGASLS 54

Query: 345 EESLKVTAIVDELMGLTVLEVMDLVEVIREKKGANNELPIAMLMVPGMGI-RGVPRGVPX 521
           + S KV AIVDE+MGLT+LEVMDLVEV+REK+G N ELPIAMLMVPGMG+ RG+PRG   
Sbjct: 55  QGSEKVAAIVDEVMGLTLLEVMDLVEVMREKRGVN-ELPIAMLMVPGMGVPRGIPRGAAK 113

Query: 522 XXXXXXXXXXXXXXXXXTAFDVKLDGFEAASKIKVIKEVRTFTSLGLKEAKDLVEKVPTL 701
                            TAFDVKL+GF+AA+KIKVIKEVRTFTSLGLKEAKDLVEKVP +
Sbjct: 114 GGGAATGGAEVKAAEK-TAFDVKLEGFDAAAKIKVIKEVRTFTSLGLKEAKDLVEKVPAV 172

Query: 702 LKKGVTKEEAETIIAKLKEVGAKASME 782
           LKKGVTKEEAE+IIAK+KEVGAK SME
Sbjct: 173 LKKGVTKEEAESIIAKMKEVGAKVSME 199


>ref|XP_004149984.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Cucumis
           sativus] gi|449491404|ref|XP_004158886.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449491408|ref|XP_004158887.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 202

 Score =  176 bits (446), Expect = 6e-42
 Identities = 115/213 (53%), Positives = 139/213 (65%), Gaps = 11/213 (5%)
 Frame = +3

Query: 177 MRHSRFII-HLSRLRKTPTPTQNPKFASPPIPTPYAVSPKPQWLSTIA----RGYSSASP 341
           MR+ R +  H SR+RKT    QNP   SP   T +   P  +  ++ +    R Y++ASP
Sbjct: 1   MRNLRILSPHFSRIRKTFA--QNPSSDSPS--TRHINFPGLETFASPSSVNHRNYTTASP 56

Query: 342 AEE---SLKVTAIVDELMGLTVLEVMDLVEVIREKKGANNELPIAMLMVPGMGI---RGV 503
                 S +V+AIVDE+ GLT+LEV DL EV+REK     E+P+  +M+PGMG    RG 
Sbjct: 57  ESRPAPSERVSAIVDEISGLTLLEVADLTEVLREKLDVK-EMPVMTMMMPGMGFGGFRGA 115

Query: 504 PRGVPXXXXXXXXXXXXXXXXXXTAFDVKLDGFEAASKIKVIKEVRTFTSLGLKEAKDLV 683
            +G P                  TAFDVKLD F+AASKIK+IKEVRTFT+LGLKEAKDLV
Sbjct: 116 GKGGPGAKGVEEKKEEK------TAFDVKLDAFDAASKIKIIKEVRTFTNLGLKEAKDLV 169

Query: 684 EKVPTLLKKGVTKEEAETIIAKLKEVGAKASME 782
           EK PTLLKKGVTKEEAETIIAK+KEVGAK SME
Sbjct: 170 EKAPTLLKKGVTKEEAETIIAKMKEVGAKVSME 202


>ref|XP_003548868.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 191

 Score =  168 bits (426), Expect = 1e-39
 Identities = 93/134 (69%), Positives = 105/134 (78%)
 Frame = +3

Query: 381 LMGLTVLEVMDLVEVIREKKGANNELPIAMLMVPGMGIRGVPRGVPXXXXXXXXXXXXXX 560
           +MGLT+L+VMD+VEV+REK G N ELPIAM+MVPGMG   VPRGVP              
Sbjct: 62  MMGLTLLKVMDMVEVMREKCGVN-ELPIAMVMVPGMG---VPRGVPKGGGGGTVGVAEVK 117

Query: 561 XXXXTAFDVKLDGFEAASKIKVIKEVRTFTSLGLKEAKDLVEKVPTLLKKGVTKEEAETI 740
               TAFDVKL+GF+ A+KIKVIKEVR FTSLGLKEAKDLVEKVP +LKKGVTKEE E+I
Sbjct: 118 AAEKTAFDVKLEGFDVAAKIKVIKEVRMFTSLGLKEAKDLVEKVPAVLKKGVTKEEVESI 177

Query: 741 IAKLKEVGAKASME 782
           IAK+KEVGAK SME
Sbjct: 178 IAKMKEVGAKVSME 191


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