BLASTX nr result
ID: Glycyrrhiza24_contig00014738
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00014738
(768 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containi... 445 e-123
ref|XP_003519761.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 386 e-105
ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250... 379 e-103
ref|NP_191848.2| pentatricopeptide repeat-containing protein [Ar... 335 8e-90
emb|CAB83139.1| putative protein [Arabidopsis thaliana] 335 8e-90
>ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 445 bits (1144), Expect = e-123
Identities = 217/259 (83%), Positives = 234/259 (90%), Gaps = 3/259 (1%)
Frame = -1
Query: 768 LGLSSDPFVQTSLIHMYSSCGSVPFAHQVFDEIPHPDLPSWNAIIHANANLGLIHNARKL 589
LGL++DPFVQTSLI+MYSSCG+ FA Q FDEI PDLPSWNAIIHANA G+IH ARKL
Sbjct: 89 LGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKAGMIHIARKL 148
Query: 588 FDRMPQRNVISWSCMIHGYVSCGEYKAALSLFRDLQ---NHNLRPNEFTMSAVLSACARL 418
FD+MP++NVISWSCMIHGYVSCGEYKAALSLFR LQ LRPNEFTMS+VLSACARL
Sbjct: 149 FDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARL 208
Query: 417 GALQHGKWVHAYIDKSGMKVDVVLGTSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWSA 238
GALQHGKWVHAYIDK+GMK+DVVLGTSLIDMYAKCGSIERAKCIFD++GPE KD+MAWSA
Sbjct: 209 GALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPE-KDVMAWSA 267
Query: 237 MITALAMHGLSGECLELFAKMVNDGGRVRPNAVTFVGVLCACVHGGLVSEGNHYFKRMKE 58
MITA +MHGLS ECLELFA+MVNDG VRPNAVTFV VLCACVHGGLVSEGN YFKRM
Sbjct: 268 MITAFSMHGLSEECLELFARMVNDG--VRPNAVTFVAVLCACVHGGLVSEGNEYFKRMMN 325
Query: 57 EYGVSPLIQHYGCMVDLYS 1
EYGVSP+IQHYGCMVDLYS
Sbjct: 326 EYGVSPMIQHYGCMVDLYS 344
Score = 80.9 bits (198), Expect = 3e-13
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 1/199 (0%)
Frame = -1
Query: 765 GLSSDPFVQTSLIHMYSSCGSVPFAHQVFDEIPHPDLPSWNAIIHANANLGLIHNARKLF 586
G+ D + TSLI MY+ CGS+ A +FD NLG
Sbjct: 225 GMKIDVVLGTSLIDMYAKCGSIERAKCIFD------------------NLG--------- 257
Query: 585 DRMPQRNVISWSCMIHGYVSCGEYKAALSLFRDLQNHNLRPNEFTMSAVLSACARLGALQ 406
P+++V++WS MI + G + L LF + N +RPN T AVL AC G +
Sbjct: 258 ---PEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVS 314
Query: 405 HG-KWVHAYIDKSGMKVDVVLGTSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWSAMIT 229
G ++ +++ G+ + ++D+Y++ G IE A + M P D+M W A++
Sbjct: 315 EGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSM-PMEPDVMIWGALLN 373
Query: 228 ALAMHGLSGECLELFAKMV 172
+HG C K++
Sbjct: 374 GARIHGDVETCEIAITKLL 392
>ref|XP_003519761.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62890-like [Glycine max]
Length = 567
Score = 386 bits (991), Expect = e-105
Identities = 196/259 (75%), Positives = 213/259 (82%), Gaps = 3/259 (1%)
Frame = -1
Query: 768 LGLSSDPFVQTSLIHMYSSCGSVPFAHQVFDEIPHPDLPSWNAIIHANANLGLIHNARKL 589
LGL++DPFVQTSLI+MYSS G++ FA QVFDEI PDLPSWNAIIHANA G+IH ARKL
Sbjct: 87 LGLANDPFVQTSLINMYSSRGTLTFARQVFDEITQPDLPSWNAIIHANAKAGMIHIARKL 146
Query: 588 FDRMPQRNVISWSCMIHGYVSCGEYKAALSLFRDLQ---NHNLRPNEFTMSAVLSACARL 418
FD+MP RNVISWSCMIHGY SCGEYKAALSLFR LQ ++PNE CARL
Sbjct: 147 FDQMPHRNVISWSCMIHGYASCGEYKAALSLFRSLQTLEGSKVQPNE--------XCARL 198
Query: 417 GALQHGKWVHAYIDKSGMKVDVVLGTSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWSA 238
GAL+HGKWVHAYIDK+GMK+DVVLGTSLIDMYAKCG I GPE KD+MAWSA
Sbjct: 199 GALEHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGXI---------FGPE-KDVMAWSA 248
Query: 237 MITALAMHGLSGECLELFAKMVNDGGRVRPNAVTFVGVLCACVHGGLVSEGNHYFKRMKE 58
MITA AMHGLS ECLELFA+MVNDG VRPNAVTFVGVLCACVHGGLVSEGN YFK+ +
Sbjct: 249 MITAFAMHGLSEECLELFARMVNDG--VRPNAVTFVGVLCACVHGGLVSEGNEYFKKRMK 306
Query: 57 EYGVSPLIQHYGCMVDLYS 1
EYGVSP IQHYGC+VDLYS
Sbjct: 307 EYGVSPTIQHYGCIVDLYS 325
Score = 65.1 bits (157), Expect = 2e-08
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Frame = -1
Query: 576 PQRNVISWSCMIHGYVSCGEYKAALSLFRDLQNHNLRPNEFTMSAVLSACARLGALQHG- 400
P+++V++WS MI + G + L LF + N +RPN T VL AC G + G
Sbjct: 239 PEKDVMAWSAMITAFAMHGLSEECLELFARMVNDGVRPNAVTFVGVLCACVHGGLVSEGN 298
Query: 399 KWVHAYIDKSGMKVDVVLGTSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWSAMITALA 220
++ + + G+ + ++D+Y++ G IE A + M P D+M W A+++ L
Sbjct: 299 EYFKKRMKEYGVSPTIQHYGCIVDLYSRAGRIEDAWSVVKSM-PVEPDVMIWGALLSGLG 357
Query: 219 MHG 211
G
Sbjct: 358 CMG 360
>ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 379 bits (973), Expect = e-103
Identities = 181/257 (70%), Positives = 214/257 (83%), Gaps = 3/257 (1%)
Frame = -1
Query: 765 GLSSDPFVQTSLIHMYSSCGSVPFAHQVFDEIPHPDLPSWNAIIHANANLGLIHNARKLF 586
GL+ DPFVQTSLI MYSSCG++ FA QVFDEIP PDLPSWN+II+AN GL+ AR LF
Sbjct: 94 GLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLF 153
Query: 585 DRMPQRNVISWSCMIHGYVSCGEYKAALSLFRDLQN---HNLRPNEFTMSAVLSACARLG 415
MP+RNVISWSCMI+GYV CG+YK AL+LFR++Q +++RPNEFTMS VL+AC RLG
Sbjct: 154 AVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLG 213
Query: 414 ALQHGKWVHAYIDKSGMKVDVVLGTSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWSAM 235
AL+HGKW HAYIDK GM VDVVLGT+LIDMYAKCGS+E+A +F ++GP NKD+MAWSAM
Sbjct: 214 ALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGP-NKDVMAWSAM 272
Query: 234 ITALAMHGLSGECLELFAKMVNDGGRVRPNAVTFVGVLCACVHGGLVSEGNHYFKRMKEE 55
I+ LAMHGL+ EC+ LF+KM+N G VRPNAVTF+ V CACVHGGLVSEG Y +RM E+
Sbjct: 273 ISGLAMHGLAEECVGLFSKMINQG--VRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTED 330
Query: 54 YGVSPLIQHYGCMVDLY 4
Y + P IQHYGCMVDLY
Sbjct: 331 YSIIPTIQHYGCMVDLY 347
Score = 75.9 bits (185), Expect = 9e-12
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 1/199 (0%)
Frame = -1
Query: 765 GLSSDPFVQTSLIHMYSSCGSVPFAHQVFDEIPHPDLPSWNAIIHANANLGLIHNARKLF 586
G+ D + T+LI MY+ CGSV A VF +NLG
Sbjct: 229 GMPVDVVLGTALIDMYAKCGSVEKATWVF------------------SNLG--------- 261
Query: 585 DRMPQRNVISWSCMIHGYVSCGEYKAALSLFRDLQNHNLRPNEFTMSAVLSACARLGALQ 406
P ++V++WS MI G G + + LF + N +RPN T AV AC G +
Sbjct: 262 ---PNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVS 318
Query: 405 HGK-WVHAYIDKSGMKVDVVLGTSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWSAMIT 229
GK ++ + + + ++D+Y + G I+ A + M P D++ W A+++
Sbjct: 319 EGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSM-PMEPDVLVWGALLS 377
Query: 228 ALAMHGLSGECLELFAKMV 172
MHG C K++
Sbjct: 378 GSRMHGDIETCELALKKLI 396
Score = 74.3 bits (181), Expect = 3e-11
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 39/196 (19%)
Frame = -1
Query: 555 WSCMIHGYVSC-----GEYKAALSLFRDLQNHNLRPNEFTMSAVLSACARLGALQHGKWV 391
W+ +I +V G + +S+F ++ H ++P+ T +L + A L G+ V
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 390 HAYIDKSGMKVDVVLGTSLIDMYAKCGSIERAKCIFDHMG-------------------- 271
HA I + G+ +D + TSLI MY+ CG++ A+ +FD +
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLV 146
Query: 270 ----------PENKDIMAWSAMITALAMHGLSGECLELFAKM----VNDGGRVRPNAVTF 133
PE +++++WS MI G E L LF +M VND VRPN T
Sbjct: 147 DMARNLFAVMPE-RNVISWSCMINGYVRCGQYKEALALFREMQMLGVND---VRPNEFTM 202
Query: 132 VGVLCACVHGGLVSEG 85
GVL AC G + G
Sbjct: 203 SGVLAACGRLGALEHG 218
>ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g62890 gi|51968398|dbj|BAD42891.1| putative protein
[Arabidopsis thaliana] gi|332646886|gb|AEE80407.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 573
Score = 335 bits (858), Expect = 8e-90
Identities = 160/259 (61%), Positives = 204/259 (78%), Gaps = 5/259 (1%)
Frame = -1
Query: 765 GLSSDPFVQTSLIHMYSSCGSVPFAHQVFDEIPHPDLPSWNAIIHANANLGLIHNARKLF 586
GL DPFV+TSL++MYSSCG + A +VFD+ DLP+WN++++A A GLI +ARKLF
Sbjct: 92 GLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLF 151
Query: 585 DRMPQRNVISWSCMIHGYVSCGEYKAALSLFRDLQ-----NHNLRPNEFTMSAVLSACAR 421
D MP+RNVISWSC+I+GYV CG+YK AL LFR++Q +RPNEFTMS VLSAC R
Sbjct: 152 DEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGR 211
Query: 420 LGALQHGKWVHAYIDKSGMKVDVVLGTSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWS 241
LGAL+ GKWVHAYIDK +++D+VLGT+LIDMYAKCGS+ERAK +F+ +G KD+ A+S
Sbjct: 212 LGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG-SKKDVKAYS 270
Query: 240 AMITALAMHGLSGECLELFAKMVNDGGRVRPNAVTFVGVLCACVHGGLVSEGNHYFKRMK 61
AMI LAM+GL+ EC +LF++M + PN+VTFVG+L ACVH GL++EG YFK M
Sbjct: 271 AMICCLAMYGLTDECFQLFSEMTT-SDNINPNSVTFVGILGACVHRGLINEGKSYFKMMI 329
Query: 60 EEYGVSPLIQHYGCMVDLY 4
EE+G++P IQHYGCMVDLY
Sbjct: 330 EEFGITPSIQHYGCMVDLY 348
Score = 66.6 bits (161), Expect = 6e-09
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 2/185 (1%)
Frame = -1
Query: 723 MYSSCGSVPFAHQVFDEIPHPDLPS--WNAIIHANANLGLIHNARKLFDRMPQRNVISWS 550
M + +A+ +F I H L S WN II A ++HN PQR+
Sbjct: 1 MSKGAAIIAYANPIF-HIRHLKLESFLWNIIIRA-----IVHNVSS-----PQRH----- 44
Query: 549 CMIHGYVSCGEYKAALSLFRDLQNHNLRPNEFTMSAVLSACARLGALQHGKWVHAYIDKS 370
+ +S++ ++NH + P+ T +L + L G+ HA I
Sbjct: 45 -------------SPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLF 91
Query: 369 GMKVDVVLGTSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWSAMITALAMHGLSGECLE 190
G+ D + TSL++MY+ CG + A+ +FD G +KD+ AW++++ A A GL + +
Sbjct: 92 GLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSG--SKDLPAWNSVVNAYAKAGLIDDARK 149
Query: 189 LFAKM 175
LF +M
Sbjct: 150 LFDEM 154
>emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 335 bits (858), Expect = 8e-90
Identities = 160/259 (61%), Positives = 204/259 (78%), Gaps = 5/259 (1%)
Frame = -1
Query: 765 GLSSDPFVQTSLIHMYSSCGSVPFAHQVFDEIPHPDLPSWNAIIHANANLGLIHNARKLF 586
GL DPFV+TSL++MYSSCG + A +VFD+ DLP+WN++++A A GLI +ARKLF
Sbjct: 92 GLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLF 151
Query: 585 DRMPQRNVISWSCMIHGYVSCGEYKAALSLFRDLQ-----NHNLRPNEFTMSAVLSACAR 421
D MP+RNVISWSC+I+GYV CG+YK AL LFR++Q +RPNEFTMS VLSAC R
Sbjct: 152 DEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGR 211
Query: 420 LGALQHGKWVHAYIDKSGMKVDVVLGTSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWS 241
LGAL+ GKWVHAYIDK +++D+VLGT+LIDMYAKCGS+ERAK +F+ +G KD+ A+S
Sbjct: 212 LGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG-SKKDVKAYS 270
Query: 240 AMITALAMHGLSGECLELFAKMVNDGGRVRPNAVTFVGVLCACVHGGLVSEGNHYFKRMK 61
AMI LAM+GL+ EC +LF++M + PN+VTFVG+L ACVH GL++EG YFK M
Sbjct: 271 AMICCLAMYGLTDECFQLFSEMTT-SDNINPNSVTFVGILGACVHRGLINEGKSYFKMMI 329
Query: 60 EEYGVSPLIQHYGCMVDLY 4
EE+G++P IQHYGCMVDLY
Sbjct: 330 EEFGITPSIQHYGCMVDLY 348
Score = 66.6 bits (161), Expect = 6e-09
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 2/185 (1%)
Frame = -1
Query: 723 MYSSCGSVPFAHQVFDEIPHPDLPS--WNAIIHANANLGLIHNARKLFDRMPQRNVISWS 550
M + +A+ +F I H L S WN II A ++HN PQR+
Sbjct: 1 MSKGAAIIAYANPIF-HIRHLKLESFLWNIIIRA-----IVHNVSS-----PQRH----- 44
Query: 549 CMIHGYVSCGEYKAALSLFRDLQNHNLRPNEFTMSAVLSACARLGALQHGKWVHAYIDKS 370
+ +S++ ++NH + P+ T +L + L G+ HA I
Sbjct: 45 -------------SPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLF 91
Query: 369 GMKVDVVLGTSLIDMYAKCGSIERAKCIFDHMGPENKDIMAWSAMITALAMHGLSGECLE 190
G+ D + TSL++MY+ CG + A+ +FD G +KD+ AW++++ A A GL + +
Sbjct: 92 GLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSG--SKDLPAWNSVVNAYAKAGLIDDARK 149
Query: 189 LFAKM 175
LF +M
Sbjct: 150 LFDEM 154