BLASTX nr result

ID: Glycyrrhiza24_contig00014709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014709
         (1562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593289.1| U3 small nucleolar RNA-associated protein-li...   792   0.0  
gb|AFK45442.1| unknown [Medicago truncatula]                          788   0.0  
gb|ACJ85598.1| unknown [Medicago truncatula]                          785   0.0  
ref|XP_003597727.1| U3 small nucleolar RNA-associated protein-li...   773   0.0  
ref|XP_003543133.1| PREDICTED: U3 small nucleolar RNA-associated...   756   0.0  

>ref|XP_003593289.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
            truncatula] gi|355482337|gb|AES63540.1| U3 small
            nucleolar RNA-associated protein-like protein [Medicago
            truncatula]
          Length = 555

 Score =  792 bits (2046), Expect = 0.0
 Identities = 400/487 (82%), Positives = 432/487 (88%)
 Frame = +1

Query: 100  MSLISQNARPKNETXXXXXXXXXXXXXXXXXXXXTLKAKKRKRDGKGEQLVKEQVREMKK 279
            MSLISQNAR KNET                    T++AKKRK DGK EQL KEQV+EMKK
Sbjct: 1    MSLISQNARSKNETKREEVVKGNEVEDGKEFDVDTVEAKKRKLDGKEEQLAKEQVKEMKK 60

Query: 280  LENFLFGSLYSPLEFGKGVDDEVEAGTAAKASDLFFTDRSADSVLSVYQQDADFXXXXXX 459
            LE+FLFGSLYSP EFGKG DDEV+A  +A AS+LFFTDRSADSVL+VYQ+DADF      
Sbjct: 61   LESFLFGSLYSPPEFGKGDDDEVDAAASATASNLFFTDRSADSVLTVYQEDADFSDESDN 120

Query: 460  XXGALQRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDENLISGSEYVSRLRAQHVKLNPG 639
               AL+RKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDE+LISGSEYVSRLRAQH KLN G
Sbjct: 121  DD-ALKRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDEDLISGSEYVSRLRAQHAKLNRG 179

Query: 640  TDWAQHESGSKIDRSSDDELTDDENKAVVSRGYEDVDDILRTNEDLVVKSSSKLLPGHIE 819
            TDWAQ +SGSK+D SSDDELTDDENKA VSRGYED+DDILRTNEDLVVKSSSKLLPGH+E
Sbjct: 180  TDWAQLDSGSKMDGSSDDELTDDENKAAVSRGYEDLDDILRTNEDLVVKSSSKLLPGHLE 239

Query: 820  YSRLVDANIQDPSNGPINSVQFHRNAQLLLAAGLDRKLRFFQIDGKRNTKIQSIFLEDCP 999
            YS+LVDAN+QDP+NGPINSVQFHRN QLLLAAGLDRKL+FFQIDGKRNTKI+SIFLEDCP
Sbjct: 240  YSKLVDANVQDPANGPINSVQFHRNGQLLLAAGLDRKLKFFQIDGKRNTKIESIFLEDCP 299

Query: 1000 IRKASFLPDGSQVILSGRRKFFYSFDLVKARVDKIGPLVGRGEKSLEVFEVSPDSQTIAF 1179
            IRKASFLPDGSQVI+SGRRKFFYS DLVKARVDKIGPL+GR EKS+EVFEVSPDSQ IAF
Sbjct: 300  IRKASFLPDGSQVIISGRRKFFYSLDLVKARVDKIGPLLGREEKSIEVFEVSPDSQLIAF 359

Query: 1180 VGNEGYILLVSTKSKQLVGTLKMNGTVRSLAFAEDGEKLLSAGGDGQVYHWDLRTRTCIH 1359
            VGNEGYILLVSTKSKQLVGTLKMNGTVRSLAF EDG+KLLSAGGDG +YHWDLRTRTCIH
Sbjct: 360  VGNEGYILLVSTKSKQLVGTLKMNGTVRSLAFTEDGQKLLSAGGDGHIYHWDLRTRTCIH 419

Query: 1360 KGVDEGCINSTALCTSPSGTHFAAGSDSGIVNVYNRDEFLGGKRKPIKAIENLTTKVDFM 1539
            KGVDEGC+N TALCTSP GTHFAAGS SG+VN+YN +EFLGGKRKPIK I+NL T+VDFM
Sbjct: 420  KGVDEGCLNGTALCTSPVGTHFAAGSASGVVNIYNSEEFLGGKRKPIKTIDNLNTEVDFM 479

Query: 1540 RFNHDSQ 1560
            +FNHDSQ
Sbjct: 480  KFNHDSQ 486


>gb|AFK45442.1| unknown [Medicago truncatula]
          Length = 555

 Score =  788 bits (2035), Expect = 0.0
 Identities = 398/487 (81%), Positives = 430/487 (88%)
 Frame = +1

Query: 100  MSLISQNARPKNETXXXXXXXXXXXXXXXXXXXXTLKAKKRKRDGKGEQLVKEQVREMKK 279
            MSLISQNAR KNET                    T++AKKRK DGK EQL KEQV+EMKK
Sbjct: 1    MSLISQNARSKNETKREEVVKGNEVEDGKEFDVDTVEAKKRKLDGKEEQLAKEQVKEMKK 60

Query: 280  LENFLFGSLYSPLEFGKGVDDEVEAGTAAKASDLFFTDRSADSVLSVYQQDADFXXXXXX 459
            LE+FLFGSLYSP EFGKG DDEV+A  +A AS+LFFTDRSADSVL+VYQ+DADF      
Sbjct: 61   LESFLFGSLYSPPEFGKGDDDEVDAAASATASNLFFTDRSADSVLTVYQEDADFSDESDN 120

Query: 460  XXGALQRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDENLISGSEYVSRLRAQHVKLNPG 639
               AL+RKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDE+LISGSEYVSRLRAQH KLN G
Sbjct: 121  DD-ALKRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDEDLISGSEYVSRLRAQHAKLNRG 179

Query: 640  TDWAQHESGSKIDRSSDDELTDDENKAVVSRGYEDVDDILRTNEDLVVKSSSKLLPGHIE 819
            TDWAQ +SGSK+D SSDDELTDDENKA VSRGYED+DDILRTNEDLVVKSSSKLLPGH+E
Sbjct: 180  TDWAQLDSGSKMDGSSDDELTDDENKAAVSRGYEDLDDILRTNEDLVVKSSSKLLPGHLE 239

Query: 820  YSRLVDANIQDPSNGPINSVQFHRNAQLLLAAGLDRKLRFFQIDGKRNTKIQSIFLEDCP 999
            YS+LVDAN+QDP+NGPINSVQFHRN QLLLAAGLDRKL+FFQIDGKRNTKI+SIFLEDCP
Sbjct: 240  YSKLVDANVQDPANGPINSVQFHRNGQLLLAAGLDRKLKFFQIDGKRNTKIESIFLEDCP 299

Query: 1000 IRKASFLPDGSQVILSGRRKFFYSFDLVKARVDKIGPLVGRGEKSLEVFEVSPDSQTIAF 1179
            IRKASFLPDGSQVI+SGRRKFFYS DLVKARVDKIGPL+GR EKS+EVFEVSPDSQ IAF
Sbjct: 300  IRKASFLPDGSQVIISGRRKFFYSLDLVKARVDKIGPLLGREEKSIEVFEVSPDSQLIAF 359

Query: 1180 VGNEGYILLVSTKSKQLVGTLKMNGTVRSLAFAEDGEKLLSAGGDGQVYHWDLRTRTCIH 1359
            VGNEGYILLVSTKSKQLVGTLKMNGTVRSLAF EDG+KLLSA GDG +YHWDLRTRTCIH
Sbjct: 360  VGNEGYILLVSTKSKQLVGTLKMNGTVRSLAFTEDGQKLLSAAGDGHIYHWDLRTRTCIH 419

Query: 1360 KGVDEGCINSTALCTSPSGTHFAAGSDSGIVNVYNRDEFLGGKRKPIKAIENLTTKVDFM 1539
            KGVDEGC+N TALCTSP GTHFAAGS SG+VN+YN +EFLGGKRKPIK I+NL T+VDFM
Sbjct: 420  KGVDEGCLNGTALCTSPVGTHFAAGSASGVVNIYNSEEFLGGKRKPIKTIDNLNTEVDFM 479

Query: 1540 RFNHDSQ 1560
            +FNHD Q
Sbjct: 480  KFNHDPQ 486


>gb|ACJ85598.1| unknown [Medicago truncatula]
          Length = 555

 Score =  785 bits (2027), Expect = 0.0
 Identities = 397/487 (81%), Positives = 429/487 (88%)
 Frame = +1

Query: 100  MSLISQNARPKNETXXXXXXXXXXXXXXXXXXXXTLKAKKRKRDGKGEQLVKEQVREMKK 279
            MSLISQNAR KNET                    T++AKKRK DGK EQL KEQV+EMKK
Sbjct: 1    MSLISQNARSKNETKREEVVKGNEVEDGKEFDVDTVEAKKRKLDGKEEQLAKEQVKEMKK 60

Query: 280  LENFLFGSLYSPLEFGKGVDDEVEAGTAAKASDLFFTDRSADSVLSVYQQDADFXXXXXX 459
            LE+FLFGSLYSP EFGKG DDEV+A  +A AS+LFFTDRSADSVL+VYQ+DADF      
Sbjct: 61   LESFLFGSLYSPPEFGKGDDDEVDAAASATASNLFFTDRSADSVLTVYQEDADFSDESDN 120

Query: 460  XXGALQRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDENLISGSEYVSRLRAQHVKLNPG 639
               AL+RKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDE+LISGSEYVSRLRAQH KLN G
Sbjct: 121  DD-ALKRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDEDLISGSEYVSRLRAQHAKLNRG 179

Query: 640  TDWAQHESGSKIDRSSDDELTDDENKAVVSRGYEDVDDILRTNEDLVVKSSSKLLPGHIE 819
            TDWAQ +S SK+D SSDDELTDDENKA VSRGYED+DDILRTNEDLVVKSSSKLLPGH+E
Sbjct: 180  TDWAQLDSRSKMDGSSDDELTDDENKAAVSRGYEDLDDILRTNEDLVVKSSSKLLPGHLE 239

Query: 820  YSRLVDANIQDPSNGPINSVQFHRNAQLLLAAGLDRKLRFFQIDGKRNTKIQSIFLEDCP 999
            YS+LVDAN+QDP+NGPINSVQFHRN QLLLAAGLDRKL+FFQIDGKRNTKI+SIFLEDCP
Sbjct: 240  YSKLVDANVQDPANGPINSVQFHRNGQLLLAAGLDRKLKFFQIDGKRNTKIESIFLEDCP 299

Query: 1000 IRKASFLPDGSQVILSGRRKFFYSFDLVKARVDKIGPLVGRGEKSLEVFEVSPDSQTIAF 1179
            IRKASFLPDGSQVI+SGRRKFFYS DLVKARVDKIGPL+GR EKS+EVFEVSPDSQ IAF
Sbjct: 300  IRKASFLPDGSQVIISGRRKFFYSLDLVKARVDKIGPLLGREEKSIEVFEVSPDSQLIAF 359

Query: 1180 VGNEGYILLVSTKSKQLVGTLKMNGTVRSLAFAEDGEKLLSAGGDGQVYHWDLRTRTCIH 1359
            VGNEGYILLVSTKSKQLVGTLKMNGTVRSLAF EDG+KLLSA GDG +YHWDLRTRTCIH
Sbjct: 360  VGNEGYILLVSTKSKQLVGTLKMNGTVRSLAFTEDGQKLLSAAGDGHIYHWDLRTRTCIH 419

Query: 1360 KGVDEGCINSTALCTSPSGTHFAAGSDSGIVNVYNRDEFLGGKRKPIKAIENLTTKVDFM 1539
            KGVDEGC+N TALCTSP GTHFAAGS SG+VN+YN +EFLGGKRKPIK I+NL T+VDFM
Sbjct: 420  KGVDEGCLNGTALCTSPVGTHFAAGSASGVVNIYNSEEFLGGKRKPIKTIDNLNTEVDFM 479

Query: 1540 RFNHDSQ 1560
            +FNHD Q
Sbjct: 480  KFNHDPQ 486


>ref|XP_003597727.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
            truncatula] gi|87240437|gb|ABD32295.1| WD40-like
            [Medicago truncatula] gi|217074444|gb|ACJ85582.1| unknown
            [Medicago truncatula] gi|355486775|gb|AES67978.1| U3
            small nucleolar RNA-associated protein-like protein
            [Medicago truncatula] gi|388499470|gb|AFK37801.1| unknown
            [Medicago truncatula]
          Length = 555

 Score =  773 bits (1996), Expect = 0.0
 Identities = 391/487 (80%), Positives = 425/487 (87%)
 Frame = +1

Query: 100  MSLISQNARPKNETXXXXXXXXXXXXXXXXXXXXTLKAKKRKRDGKGEQLVKEQVREMKK 279
            MSLISQNAR +NET                    T++ KKRK DGK E L KEQV+EMKK
Sbjct: 1    MSLISQNARSRNETKREEDLKAKEVEDGQDYDVDTVEVKKRKLDGKEEHLAKEQVKEMKK 60

Query: 280  LENFLFGSLYSPLEFGKGVDDEVEAGTAAKASDLFFTDRSADSVLSVYQQDADFXXXXXX 459
            LE+FLFGSLYSPLEFG G DDE EA TAAKAS+LFFTDRSADS L+VYQ+D+DF      
Sbjct: 61   LESFLFGSLYSPLEFGNGDDDEGEAMTAAKASNLFFTDRSADSGLTVYQEDSDFSDGSCG 120

Query: 460  XXGALQRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDENLISGSEYVSRLRAQHVKLNPG 639
               AL++KPVWVDEEEEKVTVNIAKVNRLRKLRKEEDEN+ISGSEYVSRLRAQHVKLN G
Sbjct: 121  DD-ALRKKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDENVISGSEYVSRLRAQHVKLNRG 179

Query: 640  TDWAQHESGSKIDRSSDDELTDDENKAVVSRGYEDVDDILRTNEDLVVKSSSKLLPGHIE 819
            TDWAQ +SGSK+D SSDDELTDD N  +VSRGYED+DDILRTNEDLVVKSSSKLLPGHIE
Sbjct: 180  TDWAQLDSGSKMDGSSDDELTDDGNNVLVSRGYEDLDDILRTNEDLVVKSSSKLLPGHIE 239

Query: 820  YSRLVDANIQDPSNGPINSVQFHRNAQLLLAAGLDRKLRFFQIDGKRNTKIQSIFLEDCP 999
            YS+LVDANIQDPSNGPINSVQFHRN QLLLAAGLDR LRFFQIDGKRNTKIQSIFLEDCP
Sbjct: 240  YSKLVDANIQDPSNGPINSVQFHRNGQLLLAAGLDRNLRFFQIDGKRNTKIQSIFLEDCP 299

Query: 1000 IRKASFLPDGSQVILSGRRKFFYSFDLVKARVDKIGPLVGRGEKSLEVFEVSPDSQTIAF 1179
            IRKASFLPDGSQVI+SGRRKFFYS DLVKARVDKIGPL+ R EKS+EVFEVSPDS+ IAF
Sbjct: 300  IRKASFLPDGSQVIISGRRKFFYSLDLVKARVDKIGPLLDREEKSIEVFEVSPDSKMIAF 359

Query: 1180 VGNEGYILLVSTKSKQLVGTLKMNGTVRSLAFAEDGEKLLSAGGDGQVYHWDLRTRTCIH 1359
            VGNEG+ILLVSTKSKQLVGTLKMNGT R+LAF EDG+KLLS GGDG +YHWDLRTRTC+H
Sbjct: 360  VGNEGHILLVSTKSKQLVGTLKMNGTARALAFTEDGQKLLSTGGDGHIYHWDLRTRTCMH 419

Query: 1360 KGVDEGCINSTALCTSPSGTHFAAGSDSGIVNVYNRDEFLGGKRKPIKAIENLTTKVDFM 1539
            KGVDEGC+N TA+CTSP GTHFAAGS SG+VN+YN +EFLGGKRKPIK I+NL T+VDFM
Sbjct: 420  KGVDEGCLNGTAICTSPVGTHFAAGSASGVVNIYNSEEFLGGKRKPIKTIDNLNTEVDFM 479

Query: 1540 RFNHDSQ 1560
            +FNHDSQ
Sbjct: 480  KFNHDSQ 486


>ref|XP_003543133.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
            [Glycine max]
          Length = 551

 Score =  756 bits (1952), Expect = 0.0
 Identities = 394/490 (80%), Positives = 425/490 (86%), Gaps = 3/490 (0%)
 Frame = +1

Query: 100  MSLISQNARPKNETXXXXXXXXXXXXXXXXXXXXTLKAKKRKRDGKGEQLVKEQVREMKK 279
            MSLISQNA  KN                      TLK KK+K+  +GEQL  EQV+EMKK
Sbjct: 1    MSLISQNASTKNVVNKSKREVEDDVENSD-----TLKVKKKKKYDEGEQLAMEQVKEMKK 55

Query: 280  LENFLFGSLYSPLEFGKGVDDEVEAGTAA-KASDLFFTDRSADSVLSVY-QQDADFXXXX 453
            LENFLFGSLYSPLEFGK  +DEVE   AA K SDLFFTDRSADSVL+VY ++DAD     
Sbjct: 56   LENFLFGSLYSPLEFGKE-EDEVEPPKAAEKVSDLFFTDRSADSVLTVYREEDADLSEGS 114

Query: 454  XXXXG-ALQRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDENLISGSEYVSRLRAQHVKL 630
                  ALQ+KPVWVD+EEE  TVNIAKVNRLRKLRK EDE+LISGSEYVSRLRAQHVKL
Sbjct: 115  HDDDDRALQKKPVWVDDEEENATVNIAKVNRLRKLRKGEDEDLISGSEYVSRLRAQHVKL 174

Query: 631  NPGTDWAQHESGSKIDRSSDDELTDDENKAVVSRGYEDVDDILRTNEDLVVKSSSKLLPG 810
            NPGT+WA+ +S  +IDRSSDDELTDDEN+AV+S GYEDV+D+LRTNEDLVVKS +KLLPG
Sbjct: 175  NPGTEWARADS--RIDRSSDDELTDDENEAVLSHGYEDVNDVLRTNEDLVVKSGTKLLPG 232

Query: 811  HIEYSRLVDANIQDPSNGPINSVQFHRNAQLLLAAGLDRKLRFFQIDGKRNTKIQSIFLE 990
            H+EYSRLVDANIQDP+NGPINSVQFH NAQL LAAGLDRKLRFFQIDGKRNTKIQSIFLE
Sbjct: 233  HLEYSRLVDANIQDPANGPINSVQFHPNAQLFLAAGLDRKLRFFQIDGKRNTKIQSIFLE 292

Query: 991  DCPIRKASFLPDGSQVILSGRRKFFYSFDLVKARVDKIGPLVGRGEKSLEVFEVSPDSQT 1170
            DCPIRKASFLPDGSQVI+SGRRKFFYSFDLVKARVDKIGPLVGR EKSLEVFEVSPDSQ 
Sbjct: 293  DCPIRKASFLPDGSQVIVSGRRKFFYSFDLVKARVDKIGPLVGREEKSLEVFEVSPDSQM 352

Query: 1171 IAFVGNEGYILLVSTKSKQLVGTLKMNGTVRSLAFAEDGEKLLSAGGDGQVYHWDLRTRT 1350
            IAF GNEGYILLVSTK+KQLVGTLKMNGT+RSLAFAE+G+KLLS GGDGQVYHWDLRT T
Sbjct: 353  IAFTGNEGYILLVSTKTKQLVGTLKMNGTIRSLAFAENGQKLLSGGGDGQVYHWDLRTMT 412

Query: 1351 CIHKGVDEGCINSTALCTSPSGTHFAAGSDSGIVNVYNRDEFLGGKRKPIKAIENLTTKV 1530
            C+HKGVDEGCIN TALCTSPSGTHFAAGSDSGIVN+YNR+EFLGGKRKPI+ IENLTTKV
Sbjct: 413  CLHKGVDEGCINGTALCTSPSGTHFAAGSDSGIVNIYNREEFLGGKRKPIRTIENLTTKV 472

Query: 1531 DFMRFNHDSQ 1560
            DFMRFNHDSQ
Sbjct: 473  DFMRFNHDSQ 482


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