BLASTX nr result

ID: Glycyrrhiza24_contig00014670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014670
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45810.1| unknown [Lotus japonicus]                               69   3e-10
gb|ABK96167.1| unknown [Populus trichocarpa]                           65   8e-09
ref|XP_002269195.1| PREDICTED: uncharacterized protein LOC100265...    62   6e-08
ref|XP_002519376.1| conserved hypothetical protein [Ricinus comm...    58   7e-07
gb|AFK46695.1| unknown [Medicago truncatula]                           57   2e-06

>gb|AFK45810.1| unknown [Lotus japonicus]
          Length = 317

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/46 (71%), Positives = 38/46 (82%), Gaps = 3/46 (6%)
 Frame = +2

Query: 272 SIVAAKSKKHQH---HTQGSEPTPPRITSNVKQNLRFLKIWKEFQK 400
           +I  AKSKKH     H+QGS+ TPPRITSNVKQNL+FLK+WKEFQK
Sbjct: 44  NITLAKSKKHHRSPSHSQGSQQTPPRITSNVKQNLQFLKLWKEFQK 89


>gb|ABK96167.1| unknown [Populus trichocarpa]
          Length = 297

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 36/58 (62%), Positives = 43/58 (74%), Gaps = 5/58 (8%)
 Frame = +2

Query: 242 SSSPHTHCSYSIVA--AKSKKHQHHT---QGSEPTPPRITSNVKQNLRFLKIWKEFQK 400
           SSS H + +Y +V   AKSKK Q  +   +GSE  PPRITSNVKQNL+FLK+WKEFQK
Sbjct: 14  SSSCHHYNNYRVVILMAKSKKSQPASSPNKGSESAPPRITSNVKQNLQFLKLWKEFQK 71


>ref|XP_002269195.1| PREDICTED: uncharacterized protein LOC100265963 [Vitis vinifera]
           gi|297739435|emb|CBI29617.3| unnamed protein product
           [Vitis vinifera]
          Length = 282

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/54 (59%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
 Frame = +2

Query: 245 SSPHTHCSYSIVAAKSKKHQHHT--QGSEPTPPRITSNVKQNLRFLKIWKEFQK 400
           SSP +     IVA   K  Q  +  +GSE TPPRIT+NVKQNL+FLK+WKEFQK
Sbjct: 5   SSPLSQWPSKIVARSKKSSQQPSPYKGSESTPPRITTNVKQNLQFLKLWKEFQK 58


>ref|XP_002519376.1| conserved hypothetical protein [Ricinus communis]
           gi|223541443|gb|EEF42993.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/53 (54%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
 Frame = +2

Query: 245 SSPHTHCSYSIVAAKSKKHQHHT-QGSEPTPPRITSNVKQNLRFLKIWKEFQK 400
           S+ +T+    IV  K+KK +  + +  EP PPRITSN+KQNL+FLK+WKEFQK
Sbjct: 25  SNRNTYYKIVIVMGKNKKPRSPSPKDPEPAPPRITSNLKQNLQFLKLWKEFQK 77


>gb|AFK46695.1| unknown [Medicago truncatula]
          Length = 277

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/54 (50%), Positives = 32/54 (59%)
 Frame = +2

Query: 239 YSSSPHTHCSYSIVAAKSKKHQHHTQGSEPTPPRITSNVKQNLRFLKIWKEFQK 400
           Y    H+   YS  ++K     +      P PPRITSN KQNLRFLKIWKE+QK
Sbjct: 43  YVKKRHSMIVYSSKSSKKNDSSNSQPTPPPPPPRITSNAKQNLRFLKIWKEYQK 96


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