BLASTX nr result

ID: Glycyrrhiza24_contig00014632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014632
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601241.1| hypothetical protein MTR_3g077550 [Medicago ...   176   2e-42
ref|XP_002322173.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
emb|CBI15004.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002278890.1| PREDICTED: uncharacterized protein LOC100257...   103   2e-20
ref|NP_566899.1| uncharacterized protein [Arabidopsis thaliana] ...   102   3e-20

>ref|XP_003601241.1| hypothetical protein MTR_3g077550 [Medicago truncatula]
           gi|355490289|gb|AES71492.1| hypothetical protein
           MTR_3g077550 [Medicago truncatula]
          Length = 1084

 Score =  176 bits (445), Expect = 2e-42
 Identities = 85/102 (83%), Positives = 93/102 (91%), Gaps = 2/102 (1%)
 Frame = -3

Query: 301 SSSFLIVDPARNLFRILCHIQVFALARWLSVKLPVEFYEFARHLQWTIPYFPVPWEDGPM 122
           SSSFLIVDPARNLFRILCHIQVFALARWLSVK PVEFYEF+RHLQWTIP F VPWE GPM
Sbjct: 486 SSSFLIVDPARNLFRILCHIQVFALARWLSVKWPVEFYEFSRHLQWTIPSFSVPWESGPM 545

Query: 121 NLFMVGTGPFGSSNSFTK--ASIPSMLLGKNLNFGASVYGSP 2
           +LFMVG+ PFGSS+S  K  A+IP+MLLG+NLN+GASVYGSP
Sbjct: 546 SLFMVGSSPFGSSSSSAKALATIPNMLLGQNLNYGASVYGSP 587


>ref|XP_002322173.1| predicted protein [Populus trichocarpa] gi|222869169|gb|EEF06300.1|
           predicted protein [Populus trichocarpa]
          Length = 937

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/103 (49%), Positives = 69/103 (66%), Gaps = 4/103 (3%)
 Frame = -3

Query: 298 SSFLIVDPARNLFRILCHIQVFALARWLSVKLPVEFYEFARHLQWTIPYFPVPWEDGPMN 119
           SS L  +P RN+FR  CHIQVFA++RWL+V LPVE+YEFAR+LQW+IPYF +PWE G + 
Sbjct: 342 SSLLTAEPTRNIFRTACHIQVFAMSRWLAVTLPVEYYEFARNLQWSIPYFSLPWETGDIQ 401

Query: 118 LFMVGTGPFGSSNSFTK----ASIPSMLLGKNLNFGASVYGSP 2
             MV +     ++S+       S+   L GK++N  + VYG P
Sbjct: 402 PIMVKSNSSSGAHSYISKTHDISLSMQLKGKSVNKSSPVYGLP 444


>emb|CBI15004.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/104 (51%), Positives = 67/104 (64%), Gaps = 6/104 (5%)
 Frame = -3

Query: 295  SFLIVDPARNLFRILCHIQVFALARWLSVKLPVEFYEFARHLQWTIPYFPVPWEDGPMNL 116
            S+L+ DPARNLFRI  HIQVFAL+RWL V LPVE+YEFAR +QW+IPYF +PWE G ++ 
Sbjct: 827  SYLVSDPARNLFRIASHIQVFALSRWLPVTLPVEYYEFARGIQWSIPYFSLPWETGHIHP 886

Query: 115  FMVGTGPFGSSNSFTKASIPSMLL------GKNLNFGASVYGSP 2
             MVG+     S+ +      S           NL+  ASVYG P
Sbjct: 887  IMVGSSSPTLSHLYASRIHDSGFFETVQPEEDNLDRAASVYGLP 930


>ref|XP_002278890.1| PREDICTED: uncharacterized protein LOC100257111 [Vitis vinifera]
          Length = 1087

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/104 (51%), Positives = 67/104 (64%), Gaps = 6/104 (5%)
 Frame = -3

Query: 295 SFLIVDPARNLFRILCHIQVFALARWLSVKLPVEFYEFARHLQWTIPYFPVPWEDGPMNL 116
           S+L+ DPARNLFRI  HIQVFAL+RWL V LPVE+YEFAR +QW+IPYF +PWE G ++ 
Sbjct: 470 SYLVSDPARNLFRIASHIQVFALSRWLPVTLPVEYYEFARGIQWSIPYFSLPWETGHIHP 529

Query: 115 FMVGTGPFGSSNSFTKASIPSMLL------GKNLNFGASVYGSP 2
            MVG+     S+ +      S           NL+  ASVYG P
Sbjct: 530 IMVGSSSPTLSHLYASRIHDSGFFETVQPEEDNLDRAASVYGLP 573


>ref|NP_566899.1| uncharacterized protein [Arabidopsis thaliana]
           gi|110742060|dbj|BAE98962.1| hypothetical protein
           [Arabidopsis thaliana] gi|332644860|gb|AEE78381.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 1088

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/99 (49%), Positives = 60/99 (60%)
 Frame = -3

Query: 298 SSFLIVDPARNLFRILCHIQVFALARWLSVKLPVEFYEFARHLQWTIPYFPVPWEDGPMN 119
           S +LI DP RNLFR  CHIQ FAL RWL V LPV++YE  R +QW IPYFP+PWE     
Sbjct: 487 SPYLISDPTRNLFRTACHIQFFALTRWLPVTLPVDYYELVRGIQWIIPYFPLPWETKIKE 546

Query: 118 LFMVGTGPFGSSNSFTKASIPSMLLGKNLNFGASVYGSP 2
             MV T P+   +SF   +  +M+  K      SV+G P
Sbjct: 547 QIMVATSPYIGPHSFISKTHNNMINLKTSTNAESVFGLP 585


Top