BLASTX nr result

ID: Glycyrrhiza24_contig00014610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014610
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521329.1| PREDICTED: arginine/serine-rich-splicing fac...   109   3e-22
gb|ACU23673.1| unknown [Glycine max]                                   77   1e-21
gb|AFK35075.1| unknown [Lotus japonicus]                              105   3e-21
ref|XP_003528886.1| PREDICTED: arginine/serine-rich-splicing fac...   104   6e-21
gb|AFK44835.1| unknown [Medicago truncatula]                           94   9e-18

>ref|XP_003521329.1| PREDICTED: arginine/serine-rich-splicing factor RSP41-like [Glycine
           max]
          Length = 252

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/83 (67%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
 Frame = -1

Query: 439 DRVITVEYAIRDDDDR--RNGYSPDRRGHXXXXXXXXXXXXXXXXXXXXXXXDYGHGSNP 266
           DRVITVEYAIRDDDDR  RNGYSPDRRGH                       DYGHGSNP
Sbjct: 157 DRVITVEYAIRDDDDRDRRNGYSPDRRGHDSPDGRYGRGRSPSPYRRGRGSPDYGHGSNP 216

Query: 265 ASRPEPRGSPKYERAESPINGRY 197
           +SRPEPRGSPKY+RAESPINGRY
Sbjct: 217 SSRPEPRGSPKYDRAESPINGRY 239


>gb|ACU23673.1| unknown [Glycine max]
          Length = 234

 Score = 77.0 bits (188), Expect(2) = 1e-21
 Identities = 42/55 (76%), Positives = 42/55 (76%)
 Frame = -2

Query: 375 PIEEVMTPLMGDMVVADPQVHIVEVGVAQIMVMDQIQLPGQNQEEAPSMNGLKAQ 211
           P    MT LMGDMVV DP V IVEVGVAQIMVMDQI LP Q QEEAPSMN  KAQ
Sbjct: 180 PDRRAMTLLMGDMVVVDPLVLIVEVGVAQIMVMDQIHLPDQIQEEAPSMNEPKAQ 234



 Score = 50.8 bits (120), Expect(2) = 1e-21
 Identities = 25/27 (92%), Positives = 25/27 (92%), Gaps = 2/27 (7%)
 Frame = -1

Query: 439 DRVITVEYAIRDDD--DRRNGYSPDRR 365
           DRVITVEYAIRDDD  DRRNGYSPDRR
Sbjct: 157 DRVITVEYAIRDDDDRDRRNGYSPDRR 183


>gb|AFK35075.1| unknown [Lotus japonicus]
          Length = 249

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/81 (66%), Positives = 55/81 (67%)
 Frame = -1

Query: 439 DRVITVEYAIRDDDDRRNGYSPDRRGHXXXXXXXXXXXXXXXXXXXXXXXDYGHGSNPAS 260
           DRVITVEYAIRDDDDRR+G SPDRRG                        DYGHGSNPAS
Sbjct: 156 DRVITVEYAIRDDDDRRDGQSPDRRGRVSPDGRYGRGRSPSPYRRGRGSPDYGHGSNPAS 215

Query: 259 RPEPRGSPKYERAESPINGRY 197
           RPEPRGSPKYERAESP NGRY
Sbjct: 216 RPEPRGSPKYERAESPQNGRY 236


>ref|XP_003528886.1| PREDICTED: arginine/serine-rich-splicing factor RSP41-like [Glycine
           max]
          Length = 253

 Score =  104 bits (260), Expect = 6e-21
 Identities = 56/84 (66%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
 Frame = -1

Query: 439 DRVITVEYAIRDDDDR--RNGYSPDRRGHXXXXXXXXXXXXXXXXXXXXXXXDYGHGSNP 266
           DRVITVEYAIRDDDDR  RNGYSPDRRGH                       DYGHGSNP
Sbjct: 157 DRVITVEYAIRDDDDRDRRNGYSPDRRGHDSPDGRYGRGRSPSPYRRGRGSPDYGHGSNP 216

Query: 265 ASRPEPRGSPKYERAESPI-NGRY 197
           +SRP+PRGSPKYERAESPI NGRY
Sbjct: 217 SSRPDPRGSPKYERAESPINNGRY 240


>gb|AFK44835.1| unknown [Medicago truncatula]
          Length = 294

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 51/90 (56%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
 Frame = -1

Query: 439 DRVITVEYAIRDDDDRRNGYSPDRRGHXXXXXXXXXXXXXXXXXXXXXXXDY-------- 284
           DRVITVEYAIRDDD +R+GYSPDRRG                         Y        
Sbjct: 157 DRVITVEYAIRDDDVKRDGYSPDRRGRGSPDGRYGRGSPDGRYGRGRSPSPYRRGRGSPD 216

Query: 283 -GHGSNPASRPEPRGSPKYERAESPINGRY 197
            G GSNPASRPEPRGSPKYERAESP NGRY
Sbjct: 217 YGRGSNPASRPEPRGSPKYERAESPANGRY 246


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