BLASTX nr result

ID: Glycyrrhiza24_contig00014603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014603
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533907.1| PREDICTED: F-box protein At3g58530-like [Gly...   163   1e-38
gb|AFK37495.1| unknown [Lotus japonicus]                              159   2e-37
ref|XP_002531168.1| ubiquitin-protein ligase, putative [Ricinus ...   118   4e-25
emb|CBI29975.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002276459.1| PREDICTED: F-box protein At3g58530 [Vitis vi...   116   2e-24

>ref|XP_003533907.1| PREDICTED: F-box protein At3g58530-like [Glycine max]
          Length = 353

 Score =  163 bits (413), Expect = 1e-38
 Identities = 85/97 (87%), Positives = 86/97 (88%), Gaps = 1/97 (1%)
 Frame = +3

Query: 63  VWCRETVPKVLKIVCSTC-LSLSHTELVSLLLVSPFLHRTLLSSQPLWQSLNFRELNNAG 239
           VWCRETVPKVLK+VCST  LSLSHT LVSLLLVSP LHRTLL SQPLWQSLNFRELNNAG
Sbjct: 9   VWCRETVPKVLKLVCSTLPLSLSHTNLVSLLLVSPSLHRTLLCSQPLWQSLNFRELNNAG 68

Query: 240 NRLIAALSLPRYRYVKHINLEFARDVEDTHFILIKDK 350
           NRLIAALSLPRY  VK INLEFARDVED H ILI DK
Sbjct: 69  NRLIAALSLPRYCNVKQINLEFARDVEDAHLILIMDK 105


>gb|AFK37495.1| unknown [Lotus japonicus]
          Length = 357

 Score =  159 bits (403), Expect = 2e-37
 Identities = 80/96 (83%), Positives = 87/96 (90%)
 Frame = +3

Query: 63  VWCRETVPKVLKIVCSTCLSLSHTELVSLLLVSPFLHRTLLSSQPLWQSLNFRELNNAGN 242
           VWCRETVPKV K+VCST L L+HT+LVSLLLVSP LHRTL+S QPLWQSL FRE+NNAGN
Sbjct: 15  VWCRETVPKVFKLVCST-LPLAHTDLVSLLLVSPSLHRTLVSCQPLWQSLIFREVNNAGN 73

Query: 243 RLIAALSLPRYRYVKHINLEFARDVEDTHFILIKDK 350
           RL+AALSLPRYRYVK I+LEFAR VEDTH ILIKDK
Sbjct: 74  RLLAALSLPRYRYVKQIDLEFARHVEDTHLILIKDK 109


>ref|XP_002531168.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223529238|gb|EEF31211.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 351

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/95 (60%), Positives = 77/95 (81%)
 Frame = +3

Query: 66  WCRETVPKVLKIVCSTCLSLSHTELVSLLLVSPFLHRTLLSSQPLWQSLNFRELNNAGNR 245
           W RET+PKV+KIV +T   +S  +++SLLLVSP+LH +L+S   LW +L+FRE+N AG+R
Sbjct: 12  WSRETIPKVMKIVSTT---ISQKDVISLLLVSPWLHHSLISYPSLWLALDFREMNKAGDR 68

Query: 246 LIAALSLPRYRYVKHINLEFARDVEDTHFILIKDK 350
           LI+ALSLPRYR+VK INLEFA+D+ED H  +I+ K
Sbjct: 69  LISALSLPRYRHVKQINLEFAQDIEDRHLQVIQSK 103


>emb|CBI29975.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/95 (62%), Positives = 74/95 (77%)
 Frame = +3

Query: 66  WCRETVPKVLKIVCSTCLSLSHTELVSLLLVSPFLHRTLLSSQPLWQSLNFRELNNAGNR 245
           W RET+PKVL+IV +    L   +L+SLLLVSP++HRTL+S   LW  L+FRE NNAGNR
Sbjct: 14  WSRETIPKVLRIVGTR---LPQRDLISLLLVSPWIHRTLVSCSSLWLVLDFRETNNAGNR 70

Query: 246 LIAALSLPRYRYVKHINLEFARDVEDTHFILIKDK 350
           L+AALSL RY++VK INLEFA+D+ED H  L+K K
Sbjct: 71  LVAALSLFRYQHVKQINLEFAQDIEDKHLDLLKTK 105


>ref|XP_002276459.1| PREDICTED: F-box protein At3g58530 [Vitis vinifera]
          Length = 353

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/95 (62%), Positives = 74/95 (77%)
 Frame = +3

Query: 66  WCRETVPKVLKIVCSTCLSLSHTELVSLLLVSPFLHRTLLSSQPLWQSLNFRELNNAGNR 245
           W RET+PKVL+IV +    L   +L+SLLLVSP++HRTL+S   LW  L+FRE NNAGNR
Sbjct: 14  WSRETIPKVLRIVGTR---LPQRDLISLLLVSPWIHRTLVSCSSLWLVLDFRETNNAGNR 70

Query: 246 LIAALSLPRYRYVKHINLEFARDVEDTHFILIKDK 350
           L+AALSL RY++VK INLEFA+D+ED H  L+K K
Sbjct: 71  LVAALSLFRYQHVKQINLEFAQDIEDKHLDLLKTK 105


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