BLASTX nr result

ID: Glycyrrhiza24_contig00014580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014580
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554063.1| PREDICTED: F-box protein SKIP24-like [Glycin...   276   3e-72
gb|AFK35078.1| unknown [Lotus japonicus]                              266   3e-69
gb|AFK35084.1| unknown [Lotus japonicus]                              266   3e-69
ref|XP_003624758.1| F-box protein SKIP24 [Medicago truncatula] g...   247   2e-63
ref|XP_003624776.1| F-box protein SKIP24 [Medicago truncatula] g...   231   9e-59

>ref|XP_003554063.1| PREDICTED: F-box protein SKIP24-like [Glycine max]
          Length = 267

 Score =  276 bits (706), Expect = 3e-72
 Identities = 141/222 (63%), Positives = 160/222 (72%)
 Frame = +2

Query: 74  LLPDELWRRIFEVGIESSSISYKDLCCISITCRRFHRLCSENRLWNXXXXXXXXXXXXXX 253
           LLPDELWRRI E+GIES+  SYKDLCC+SI+CRR HRL SE  LWN              
Sbjct: 5   LLPDELWRRILEIGIESNGFSYKDLCCVSISCRRLHRLSSEEPLWNRLLFSDYPQSQSHP 64

Query: 254 XXXXXXXXXKSLYKSRFERVKERKIAAHRRALLRKESQIAEHSRRLRDIXXXXXXXXXXX 433
                    KSLY+ RFER KER+IAAHRRA+LRKESQ+AEHSRRL+D+           
Sbjct: 65  SSSSSSSSSKSLYRLRFERDKERRIAAHRRAVLRKESQVAEHSRRLKDMKTRLAQETTKA 124

Query: 434 XXXXXXLSNLCRIRQANVALNVWQPEVVRDSQKQMVEQSVVPAESRIHALENEFRLCKQQ 613
                 LSNL R+RQA VALNVWQPEVVR  QKQMVEQSVVPAE RIHALE EF+LCKQQ
Sbjct: 125 TQTAQDLSNLRRLRQAFVALNVWQPEVVRGRQKQMVEQSVVPAECRIHALEMEFKLCKQQ 184

Query: 614 LMSLDKSYKYEKLRLETAKAELVAMKYHPLREHMPVSGGENE 739
           ++ L+KSYK EK RL+TAK EL +MKYHP++EH P SGGENE
Sbjct: 185 ILGLEKSYKDEKRRLDTAKEELASMKYHPVQEHKPTSGGENE 226


>gb|AFK35078.1| unknown [Lotus japonicus]
          Length = 257

 Score =  266 bits (681), Expect = 3e-69
 Identities = 142/234 (60%), Positives = 164/234 (70%)
 Frame = +2

Query: 38  TPQTCLDFPRMSLLPDELWRRIFEVGIESSSISYKDLCCISITCRRFHRLCSENRLWNXX 217
           TPQ  +  P+MS LP+ELWRRI E+G+ESS  +YKDLCCISI+CRRFHRL S++ LWN  
Sbjct: 4   TPQL-VGIPKMSSLPEELWRRILEIGVESSGFTYKDLCCISISCRRFHRLSSDDSLWNPL 62

Query: 218 XXXXXXXXXXXXXXXXXXXXXKSLYKSRFERVKERKIAAHRRALLRKESQIAEHSRRLRD 397
                                KSLYK RFER KER+IAAH+R +LRKESQ+AEHSR+LR+
Sbjct: 63  LSSDFPSLTPPSSSSTSPSA-KSLYKLRFERDKERRIAAHKRVVLRKESQVAEHSRKLRN 121

Query: 398 IXXXXXXXXXXXXXXXXXLSNLCRIRQANVALNVWQPEVVRDSQKQMVEQSVVPAESRIH 577
           I                 LS+L RIRQA+VALNVWQPEVVR  QKQMVEQ  VPAESRIH
Sbjct: 122 IQTRVAEESIKAGETAVELSSLRRIRQASVALNVWQPEVVRGRQKQMVEQCAVPAESRIH 181

Query: 578 ALENEFRLCKQQLMSLDKSYKYEKLRLETAKAELVAMKYHPLREHMPVSGGENE 739
           ALE E RLCKQQ+M L+K +K EK RL  AK EL +MKYHPL+EH PVSG ENE
Sbjct: 182 ALEMELRLCKQQIMGLEKYHKDEKRRLNIAKEELESMKYHPLQEHKPVSGRENE 235


>gb|AFK35084.1| unknown [Lotus japonicus]
          Length = 257

 Score =  266 bits (680), Expect = 3e-69
 Identities = 142/234 (60%), Positives = 164/234 (70%)
 Frame = +2

Query: 38  TPQTCLDFPRMSLLPDELWRRIFEVGIESSSISYKDLCCISITCRRFHRLCSENRLWNXX 217
           TPQ  +  P+MS LP+ELWRRI E+G+ESS  +YKDLCCISI+CRRFHRL S++ LWN  
Sbjct: 4   TPQL-VGIPKMSSLPEELWRRILEIGVESSGFTYKDLCCISISCRRFHRLSSDDSLWNPL 62

Query: 218 XXXXXXXXXXXXXXXXXXXXXKSLYKSRFERVKERKIAAHRRALLRKESQIAEHSRRLRD 397
                                KSLYK RFER KER+IAAH+R +LRKESQ+AEHSR+LR+
Sbjct: 63  LSSDFPSLTPPSSSSTSPSA-KSLYKLRFERDKERRIAAHKRVVLRKESQVAEHSRKLRN 121

Query: 398 IXXXXXXXXXXXXXXXXXLSNLCRIRQANVALNVWQPEVVRDSQKQMVEQSVVPAESRIH 577
           I                 LS+L RIRQA+VALNVWQPEVVR  QKQMVEQ  VPAESRIH
Sbjct: 122 IQTRVAEESIKAGETAVELSSLRRIRQASVALNVWQPEVVRGRQKQMVEQCAVPAESRIH 181

Query: 578 ALENEFRLCKQQLMSLDKSYKYEKLRLETAKAELVAMKYHPLREHMPVSGGENE 739
           ALE E RLCKQQ+M L+K +K EK RL  AK EL +MKYHPL+EH PVSG ENE
Sbjct: 182 ALEMELRLCKQQIMGLEKYHKDEKRRLNIAKEELESMKYHPLQEHEPVSGRENE 235


>ref|XP_003624758.1| F-box protein SKIP24 [Medicago truncatula]
           gi|355499773|gb|AES80976.1| F-box protein SKIP24
           [Medicago truncatula]
          Length = 241

 Score =  247 bits (630), Expect = 2e-63
 Identities = 131/224 (58%), Positives = 150/224 (66%)
 Frame = +2

Query: 68  MSLLPDELWRRIFEVGIESSSISYKDLCCISITCRRFHRLCSENRLWNXXXXXXXXXXXX 247
           MS LP ELW +I E+GI+   +SYKDLCCISI+CR  HRL  E+ LWN            
Sbjct: 1   MSSLPIELWTKILEIGIQDCGLSYKDLCCISISCRLLHRLSVEDSLWNRLLSSDFPSSST 60

Query: 248 XXXXXXXXXXXKSLYKSRFERVKERKIAAHRRALLRKESQIAEHSRRLRDIXXXXXXXXX 427
                      KSLYK RFER KERKIAAHRR +LRKESQI EHSRRL DI         
Sbjct: 61  SSSSSSS----KSLYKLRFERDKERKIAAHRRVVLRKESQILEHSRRLHDIQTCVSQEKL 116

Query: 428 XXXXXXXXLSNLCRIRQANVALNVWQPEVVRDSQKQMVEQSVVPAESRIHALENEFRLCK 607
                   LS+L R+R+A+VALNVWQPEVVR  QKQMVEQ VVPAESRI  LE E RLCK
Sbjct: 117 KAIQTSTELSHLRRVREASVALNVWQPEVVRGRQKQMVEQCVVPAESRIRTLEMELRLCK 176

Query: 608 QQLMSLDKSYKYEKLRLETAKAELVAMKYHPLREHMPVSGGENE 739
           Q ++ L+KSY+ EK RL+ AK EL ++KYHPLR+H PV GGENE
Sbjct: 177 QHILGLEKSYRDEKCRLDNAKEELESLKYHPLRKHKPVGGGENE 220


>ref|XP_003624776.1| F-box protein SKIP24 [Medicago truncatula]
           gi|355499791|gb|AES80994.1| F-box protein SKIP24
           [Medicago truncatula]
          Length = 269

 Score =  231 bits (590), Expect = 9e-59
 Identities = 129/233 (55%), Positives = 148/233 (63%), Gaps = 9/233 (3%)
 Frame = +2

Query: 68  MSLLPDELWRRIFEVGIESSSISYKDLCCISITCRRFHRLCSENRLWNXXXXXXXXXXXX 247
           MS LP ELW +I E+GI+   +SYKDLCCISI+CR  HRL  E+ LWN            
Sbjct: 1   MSSLPIELWTKILEIGIQDCGLSYKDLCCISISCRLLHRLSVEDSLWNRLLSSDFPSSST 60

Query: 248 XXXXXXXXXXXKSLYKSRFERVKERKIAAHRRALLRKESQIAEHSRRLRDIXXXXXXXXX 427
                      KSLYK RFER KERKIAAHRR +LRKESQI EHSRRL DI         
Sbjct: 61  SSSSSSS----KSLYKLRFERDKERKIAAHRRVVLRKESQILEHSRRLHDIQTCVSQEKL 116

Query: 428 XXXXXXXXLSNLCRIRQANVALNVWQPEVVRDSQKQMVEQSVVPAESRIHALENEFRLCK 607
                   LS+L R+R+A+VALNVWQPEVVR  QKQMVEQ VVPAESRI  LE E RLCK
Sbjct: 117 KAIQTSTELSHLRRVREASVALNVWQPEVVRGRQKQMVEQCVVPAESRIRTLEMELRLCK 176

Query: 608 QQ---------LMSLDKSYKYEKLRLETAKAELVAMKYHPLREHMPVSGGENE 739
           Q          L++L+   + EK RL+ AK EL ++KYHPLR+H PV GGENE
Sbjct: 177 QHYFGVGEVLLLLTLNCIQRDEKCRLDNAKEELESLKYHPLRKHKPVGGGENE 229


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