BLASTX nr result

ID: Glycyrrhiza24_contig00014572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014572
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541362.1| PREDICTED: DNA repair and recombination prot...   591   e-166
ref|XP_002529848.1| DNA repair and recombination protein RAD26, ...   523   e-146
ref|XP_002307656.1| chromatin remodeling complex subunit [Populu...   504   e-140
emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]   503   e-140
ref|XP_004151991.1| PREDICTED: DNA repair protein rhp26-like [Cu...   501   e-139

>ref|XP_003541362.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine
            max]
          Length = 1210

 Score =  591 bits (1523), Expect = e-166
 Identities = 299/348 (85%), Positives = 320/348 (91%)
 Frame = +2

Query: 2    LNVWKEQGHRVLLFTQTQQMLDIFEKYLTNSSHIYRRMDGLTPVKQRMALIDEFNDSSEV 181
            LNVWKEQGHRVLLFTQTQQML+IFE +LT S HIYRRMDGLTPVKQRMALIDEFNDSSE+
Sbjct: 745  LNVWKEQGHRVLLFTQTQQMLNIFENFLTTSGHIYRRMDGLTPVKQRMALIDEFNDSSEI 804

Query: 182  FVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGT 361
            F+FILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGT
Sbjct: 805  FIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGT 864

Query: 362  IEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISE 541
            IEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISE
Sbjct: 865  IEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISE 924

Query: 542  EVNIIGTHKDNQDKHEYSQTAEPGSEYVADHDDGKSLRGSLRGKGKEKVEQSNGVDEETN 721
            EVN+IGT+K+N+DK+++SQTAE  SE VA  +D KS RG             NGV EETN
Sbjct: 925  EVNVIGTYKENKDKYKHSQTAELVSEDVAVGNDDKSERG-------------NGVGEETN 971

Query: 722  ILRSLFDANGIHSALNHDLIMNAHDEEKMRLEEQASQVAQRAAEALRQSRMLRSHDSISV 901
            IL+SLFDANGIHSA+NHDLIMNAHDEEK+RLEEQASQVAQRAAEALRQSRMLRSHDS+SV
Sbjct: 972  ILKSLFDANGIHSAMNHDLIMNAHDEEKIRLEEQASQVAQRAAEALRQSRMLRSHDSVSV 1031

Query: 902  PTWTGRSGTAGAPTSVRRKFGSTVNPQLLNSNCKASDELPSNGSNKFN 1045
            PTWTGRSGTAGAP+SV+RKFGSTVNPQL+N N KASDELP+ G+NK N
Sbjct: 1032 PTWTGRSGTAGAPSSVKRKFGSTVNPQLVN-NSKASDELPNKGTNKIN 1078


>ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
            communis] gi|223530676|gb|EEF32549.1| DNA repair and
            recombination protein RAD26, putative [Ricinus communis]
          Length = 1230

 Score =  523 bits (1347), Expect = e-146
 Identities = 265/344 (77%), Positives = 297/344 (86%), Gaps = 3/344 (0%)
 Frame = +2

Query: 2    LNVWKEQGHRVLLFTQTQQMLDIFEKYLTNSSHIYRRMDGLTPVKQRMALIDEFNDSSEV 181
            L VW+EQGHRVLLF QTQQMLDI E +L +  + YRRMDGLTP+KQRMALIDEFN+S++V
Sbjct: 752  LKVWREQGHRVLLFAQTQQMLDILEIFLNSGGYSYRRMDGLTPIKQRMALIDEFNNSNDV 811

Query: 182  FVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGT 361
            F+FILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGT
Sbjct: 812  FIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGT 871

Query: 362  IEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISE 541
            IEEKVYHRQIYKHFLTNKILKNPQQ+RFFKARDMKDLFTLN DG +G TETSNIFSQ+SE
Sbjct: 872  IEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKDLFTLNDDGGSGLTETSNIFSQLSE 931

Query: 542  EVNIIGTHKDNQDKHE-YSQTAEPGSEYVADHDDGKSLRGSLR-GKGKEKVEQSNG-VDE 712
            EVN++G  K+ +DK + Y  +A    +   D ++   +  S R GKGKEK   S+G VDE
Sbjct: 932  EVNVVGAKKEKEDKKKHYKGSASHADDAALDKENSPEIGPSHRKGKGKEKANHSDGEVDE 991

Query: 713  ETNILRSLFDANGIHSALNHDLIMNAHDEEKMRLEEQASQVAQRAAEALRQSRMLRSHDS 892
            ETNILRSL DA GIHSA+NHD IMNAHDEEK RLEEQASQVAQRAAEALRQSRMLRSHDS
Sbjct: 992  ETNILRSLIDAQGIHSAVNHDAIMNAHDEEKTRLEEQASQVAQRAAEALRQSRMLRSHDS 1051

Query: 893  ISVPTWTGRSGTAGAPTSVRRKFGSTVNPQLLNSNCKASDELPS 1024
            +SVPTWTG+SGTAGAP+SVRRKFGSTVN QL+ S+  +S++  S
Sbjct: 1052 VSVPTWTGKSGTAGAPSSVRRKFGSTVNSQLIRSSDVSSNKTSS 1095


>ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222857105|gb|EEE94652.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1206

 Score =  504 bits (1297), Expect = e-140
 Identities = 259/346 (74%), Positives = 292/346 (84%), Gaps = 1/346 (0%)
 Frame = +2

Query: 2    LNVWKEQGHRVLLFTQTQQMLDIFEKYLTNSSHIYRRMDGLTPVKQRMALIDEFNDSSEV 181
            L VW+EQGHRVLLFTQTQQMLDIFE +L +  + YRRMDG TP+K RM++IDEFN+S ++
Sbjct: 748  LKVWQEQGHRVLLFTQTQQMLDIFENFLNSGGYNYRRMDGSTPIKLRMSIIDEFNNSGDI 807

Query: 182  FVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGT 361
            F+FILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQK+DVTVYRLIT GT
Sbjct: 808  FIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKKDVTVYRLITGGT 867

Query: 362  IEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISE 541
            IEEKVYHRQIYKHFLTNKILKNPQQ+RFF+ARDMKDLFTLN DGE GSTETSNIFSQ+SE
Sbjct: 868  IEEKVYHRQIYKHFLTNKILKNPQQRRFFRARDMKDLFTLNDDGEGGSTETSNIFSQLSE 927

Query: 542  EVNIIGTHKDNQDKHEYSQTAEPGSEYVADHDDGKSLRGSLRGKGKEKVEQSNG-VDEET 718
            +VN++GT K+   K + ++        +A H D            KEK + S+G VDEET
Sbjct: 928  DVNVVGTKKEKLKKRKKNKG-------IAQHADDAI---------KEKADCSDGEVDEET 971

Query: 719  NILRSLFDANGIHSALNHDLIMNAHDEEKMRLEEQASQVAQRAAEALRQSRMLRSHDSIS 898
            NIL+SLFDANGIHSA+NHD+IMNAHD EKMRLEEQASQVAQRAAEALRQSRMLRS DSIS
Sbjct: 972  NILKSLFDANGIHSAVNHDVIMNAHDGEKMRLEEQASQVAQRAAEALRQSRMLRSRDSIS 1031

Query: 899  VPTWTGRSGTAGAPTSVRRKFGSTVNPQLLNSNCKASDELPSNGSN 1036
            VPTWTG+SGTAGAP+SVR+KFGSTVN QL+    K+SD   SN SN
Sbjct: 1032 VPTWTGKSGTAGAPSSVRQKFGSTVNSQLI----KSSDSSSSNKSN 1073


>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
          Length = 1249

 Score =  503 bits (1295), Expect = e-140
 Identities = 257/350 (73%), Positives = 293/350 (83%), Gaps = 2/350 (0%)
 Frame = +2

Query: 2    LNVWKEQGHRVLLFTQTQQMLDIFEKYLTNSSHIYRRMDGLTPVKQRMALIDEFNDSSEV 181
            L  WKEQGHRVLLF QTQQMLDI E +L    ++YRRMDG TP+K RMALIDEFNDS +V
Sbjct: 772  LKGWKEQGHRVLLFAQTQQMLDILENFLIAGGYVYRRMDGFTPIKHRMALIDEFNDSDDV 831

Query: 182  FVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGT 361
            F+FILTTKVGGLGTNLTGANRVII+DPDWNPSTDMQARERAWRIGQ RDVTVYRLITRGT
Sbjct: 832  FIFILTTKVGGLGTNLTGANRVIIYDPDWNPSTDMQARERAWRIGQTRDVTVYRLITRGT 891

Query: 362  IEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISE 541
            IEEKVY RQIYKHFLTNKILKNPQQKRFFKARDMKDLF LN DGE  STETSNIFSQ+SE
Sbjct: 892  IEEKVYQRQIYKHFLTNKILKNPQQKRFFKARDMKDLFVLNDDGEDASTETSNIFSQLSE 951

Query: 542  EVNIIGTHKDNQDKHEYSQTAEPGSEYV--ADHDDGKSLRGSLRGKGKEKVEQSNGVDEE 715
            +VN++G HKDNQDK    ++  P S +   A  +   S  GS R    EK +QS+ +D+E
Sbjct: 952  DVNVVGKHKDNQDK---QKSIIPVSSHACGAVDEGNNSTIGSSRSGENEKDDQSDEMDKE 1008

Query: 716  TNILRSLFDANGIHSALNHDLIMNAHDEEKMRLEEQASQVAQRAAEALRQSRMLRSHDSI 895
            TNILRSLFDA+ +HSA+NHD IMNAH +EKMRLEE+AS+VA+RA+EALRQS+MLRS +SI
Sbjct: 1009 TNILRSLFDAHRLHSAVNHDAIMNAHGDEKMRLEEEASRVAKRASEALRQSQMLRSRESI 1068

Query: 896  SVPTWTGRSGTAGAPTSVRRKFGSTVNPQLLNSNCKASDELPSNGSNKFN 1045
            SVPTWTGRSG AGAP+SV RKFGSTV+ QL+N + K+S+E  SNG +K N
Sbjct: 1069 SVPTWTGRSGAAGAPSSVSRKFGSTVSSQLINRS-KSSEESSSNGMSKPN 1117


>ref|XP_004151991.1| PREDICTED: DNA repair protein rhp26-like [Cucumis sativus]
            gi|449522123|ref|XP_004168077.1| PREDICTED: DNA repair
            protein rhp26-like [Cucumis sativus]
          Length = 1221

 Score =  501 bits (1290), Expect = e-139
 Identities = 253/350 (72%), Positives = 292/350 (83%), Gaps = 2/350 (0%)
 Frame = +2

Query: 2    LNVWKEQGHRVLLFTQTQQMLDIFEKYLTNSSHIYRRMDGLTPVKQRMALIDEFNDSSEV 181
            L VWKEQGHRVLLF QTQQMLDI E++L    + YRRMDG TPVKQRMALIDEFN+S EV
Sbjct: 746  LKVWKEQGHRVLLFAQTQQMLDILERFLVGGGYTYRRMDGGTPVKQRMALIDEFNNSCEV 805

Query: 182  FVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGT 361
            FVFILTTKVGGLGTNLTGA+RVIIFDPDWNPSTDMQARERAWRIGQ+RDVTVYRLITRGT
Sbjct: 806  FVFILTTKVGGLGTNLTGADRVIIFDPDWNPSTDMQARERAWRIGQQRDVTVYRLITRGT 865

Query: 362  IEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFTLNVDGETGSTETSNIFSQISE 541
            IEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFTLN DG  GSTETSNIFS +++
Sbjct: 866  IEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFTLNEDGMDGSTETSNIFSALTD 925

Query: 542  EVNIIGTHKDNQDKHEYSQTAEPGSEYVADHDDGKSLRGSLRGKGK-EKVE-QSNGVDEE 715
             VN++G  K+ +D     Q +  GS   AD  D    +  +   G+   +E Q  G DE+
Sbjct: 926  SVNVVGVQKNEKD----GQKSSSGSVLFADSADENLCKSEIETSGRSSSIEGQGGGADED 981

Query: 716  TNILRSLFDANGIHSALNHDLIMNAHDEEKMRLEEQASQVAQRAAEALRQSRMLRSHDSI 895
            TNIL+SLFDA+GIHSA+NHD+I+NA D EK+RLEEQASQVA+RAAEALRQSRMLRS++S+
Sbjct: 982  TNILKSLFDAHGIHSAVNHDIIINADDGEKIRLEEQASQVARRAAEALRQSRMLRSNESV 1041

Query: 896  SVPTWTGRSGTAGAPTSVRRKFGSTVNPQLLNSNCKASDELPSNGSNKFN 1045
            SVPTWTG++GTAGAP+SVRRKFGSTVN  ++ +N K+S+E+  NG+   N
Sbjct: 1042 SVPTWTGKAGTAGAPSSVRRKFGSTVNTLVVTNNSKSSNEVSKNGTIHLN 1091


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