BLASTX nr result

ID: Glycyrrhiza24_contig00014559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014559
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554911.1| PREDICTED: nipped-B-like protein-like [Glyci...   138   5e-31
ref|XP_003543868.1| PREDICTED: nipped-B-like protein-like [Glyci...   134   6e-30
ref|XP_003618719.1| Sister chromatid cohesion [Medicago truncatu...   134   8e-30
ref|XP_002279278.2| PREDICTED: nipped-B-like protein-like [Vitis...   108   3e-22
emb|CBI22299.3| unnamed protein product [Vitis vinifera]              108   3e-22

>ref|XP_003554911.1| PREDICTED: nipped-B-like protein-like [Glycine max]
          Length = 1655

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/78 (87%), Positives = 71/78 (91%), Gaps = 1/78 (1%)
 Frame = +2

Query: 2   LPLPSLPVFCGASDQDLRLFDSPMLLNRVDILAQSGKIAEMLRHTDVSYLNLRDDA-GAP 178
           LPLPSLPVFCGASDQDLRL DSP  LNRVD+LAQS KIAE+LRHTDVSYLNLRD+A G P
Sbjct: 34  LPLPSLPVFCGASDQDLRLVDSPARLNRVDVLAQSAKIAELLRHTDVSYLNLRDEAKGVP 93

Query: 179 YNYVEPLELHDEVLRCNP 232
           Y YVEPLELHDEVLRCNP
Sbjct: 94  YIYVEPLELHDEVLRCNP 111


>ref|XP_003543868.1| PREDICTED: nipped-B-like protein-like [Glycine max]
          Length = 1723

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/78 (84%), Positives = 70/78 (89%), Gaps = 1/78 (1%)
 Frame = +2

Query: 2   LPLPSLPVFCGASDQDLRLFDSPMLLNRVDILAQSGKIAEMLRHTDVSYLNLRDDA-GAP 178
           LPLPSLPVFCGASDQDLRL DSP  LNRVD+LAQS KIAE+LRHTDVSYLNLR +A G P
Sbjct: 36  LPLPSLPVFCGASDQDLRLVDSPARLNRVDVLAQSAKIAELLRHTDVSYLNLRGEAKGVP 95

Query: 179 YNYVEPLELHDEVLRCNP 232
           Y YVEPLELHDEV+RCNP
Sbjct: 96  YIYVEPLELHDEVIRCNP 113


>ref|XP_003618719.1| Sister chromatid cohesion [Medicago truncatula]
           gi|355493734|gb|AES74937.1| Sister chromatid cohesion
           [Medicago truncatula]
          Length = 1167

 Score =  134 bits (337), Expect = 8e-30
 Identities = 66/78 (84%), Positives = 71/78 (91%), Gaps = 1/78 (1%)
 Frame = +2

Query: 2   LPLPSLPVFCGASDQDLRLFDSPMLLNRVDILAQSGKIAEMLRHTDVSYLNLRDDA-GAP 178
           LPLPSLPVFCGASD +LRLFDSP+ LNRV+IL+QS KIAEMLR+TDVSYLNLRDDA   P
Sbjct: 36  LPLPSLPVFCGASDHNLRLFDSPLPLNRVEILSQSSKIAEMLRNTDVSYLNLRDDAKTVP 95

Query: 179 YNYVEPLELHDEVLRCNP 232
           YNY EPLELHDEVLRCNP
Sbjct: 96  YNYAEPLELHDEVLRCNP 113


>ref|XP_002279278.2| PREDICTED: nipped-B-like protein-like [Vitis vinifera]
          Length = 1967

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 4/81 (4%)
 Frame = +2

Query: 2   LPLPSLPVFCGASDQDLRLFDSP---MLLNRVDILAQSGKIAEMLRHTDVSYLNLRDD-A 169
           LPLPSLPVFCGA DQ+LRLFD P     LNR D+++Q+ +IA++LR TD+SYLNLRDD  
Sbjct: 35  LPLPSLPVFCGAYDQELRLFDEPRNARSLNRRDVISQASRIADLLRETDISYLNLRDDEC 94

Query: 170 GAPYNYVEPLELHDEVLRCNP 232
             PY +VEPL L+DEV+RCNP
Sbjct: 95  SFPYGFVEPLVLYDEVVRCNP 115


>emb|CBI22299.3| unnamed protein product [Vitis vinifera]
          Length = 1748

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/81 (65%), Positives = 65/81 (80%), Gaps = 4/81 (4%)
 Frame = +2

Query: 2   LPLPSLPVFCGASDQDLRLFDSP---MLLNRVDILAQSGKIAEMLRHTDVSYLNLRDD-A 169
           LPLPSLPVFCGA DQ+LRLFD P     LNR D+++Q+ +IA++LR TD+SYLNLRDD  
Sbjct: 35  LPLPSLPVFCGAYDQELRLFDEPRNARSLNRRDVISQASRIADLLRETDISYLNLRDDEC 94

Query: 170 GAPYNYVEPLELHDEVLRCNP 232
             PY +VEPL L+DEV+RCNP
Sbjct: 95  SFPYGFVEPLVLYDEVVRCNP 115


Top