BLASTX nr result

ID: Glycyrrhiza24_contig00014513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014513
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532940.1| PREDICTED: uncharacterized protein LOC100812...    89   4e-16
ref|XP_003545913.1| PREDICTED: uncharacterized protein LOC100787...    85   6e-15
ref|XP_003545912.1| PREDICTED: uncharacterized protein LOC100787...    76   3e-12
ref|XP_003531500.1| PREDICTED: uncharacterized protein LOC100805...    71   9e-11
ref|NP_565199.1| DNA topoisomerase 2-associated protein PAT1 [Ar...    65   9e-09

>ref|XP_003532940.1| PREDICTED: uncharacterized protein LOC100812450 [Glycine max]
          Length = 886

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/61 (75%), Positives = 50/61 (81%)
 Frame = +1

Query: 361 VGGAPNTEDLTRLGNVHTGGAVFDASQYAFFGKDVVQGVELGGLEEDDYLPPTVESNEEE 540
           VGGAPN E+L  LGNV + GAVFDASQYAFFGK+ VQ VELGGLE+D  L P VESNEEE
Sbjct: 13  VGGAPNAENLRELGNVSSEGAVFDASQYAFFGKEAVQEVELGGLEDDGCL-PIVESNEEE 71

Query: 541 F 543
           F
Sbjct: 72  F 72


>ref|XP_003545913.1| PREDICTED: uncharacterized protein LOC100787648 [Glycine max]
          Length = 883

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 45/61 (73%), Positives = 49/61 (80%)
 Frame = +1

Query: 361 VGGAPNTEDLTRLGNVHTGGAVFDASQYAFFGKDVVQGVELGGLEEDDYLPPTVESNEEE 540
           VGGAPN E+L  LGNV + GAVFDASQYAFF K+ VQ VELGGLE+D  L PTVESNEE 
Sbjct: 10  VGGAPNAENLRGLGNVSSEGAVFDASQYAFFSKEAVQEVELGGLEDDGCL-PTVESNEEF 68

Query: 541 F 543
           F
Sbjct: 69  F 69


>ref|XP_003545912.1| PREDICTED: uncharacterized protein LOC100787112 [Glycine max]
          Length = 828

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 42/60 (70%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
 Frame = +1

Query: 361 VGGAPNTEDLTRLGNVHTGGAVFDASQYAFFGKD-VVQGVELGGLEEDDYLPPTVESNEE 537
           VGG PNTEDL +LGN  T GAVFDASQYAFFG D  VQ VELGGL++DD L    ESN E
Sbjct: 13  VGGTPNTEDLGQLGNAPTEGAVFDASQYAFFGSDTAVQEVELGGLDDDDLL----ESNAE 68


>ref|XP_003531500.1| PREDICTED: uncharacterized protein LOC100805313 [Glycine max]
          Length = 827

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 42/62 (67%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
 Frame = +1

Query: 361 VGGAPNTEDLTRLGNVHTGGAVFDASQYAFFGKD-VVQGVELGGLEEDDYLPPTVESNEE 537
           VGG P T DL +LGNV T   VFDASQYAFFG D  VQ VELGGL++DD L   +ESNEE
Sbjct: 13  VGGTPKTGDLRQLGNVPT---VFDASQYAFFGSDTAVQEVELGGLDDDDGL---LESNEE 66

Query: 538 EF 543
           EF
Sbjct: 67  EF 68


>ref|NP_565199.1| DNA topoisomerase 2-associated protein PAT1 [Arabidopsis thaliana]
           gi|30699394|ref|NP_849904.1| DNA topoisomerase
           2-associated protein PAT1 [Arabidopsis thaliana]
           gi|110738020|dbj|BAF00945.1| hypothetical protein
           [Arabidopsis thaliana] gi|227202670|dbj|BAH56808.1|
           AT1G79090 [Arabidopsis thaliana]
           gi|332198081|gb|AEE36202.1| DNA topoisomerase
           2-associated protein PAT1 [Arabidopsis thaliana]
           gi|332198082|gb|AEE36203.1| DNA topoisomerase
           2-associated protein PAT1 [Arabidopsis thaliana]
          Length = 793

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 30/45 (66%), Positives = 36/45 (80%)
 Frame = +1

Query: 370 APNTEDLTRLGNVHTGGAVFDASQYAFFGKDVVQGVELGGLEEDD 504
           AP T+DL + G+  TG  +FDASQYAFFG DVV+ VELGGLEE+D
Sbjct: 13  APVTQDLKKFGDNSTGNTMFDASQYAFFGNDVVEEVELGGLEEED 57


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