BLASTX nr result

ID: Glycyrrhiza24_contig00014506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014506
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...   200   9e-50
ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medica...   181   6e-44
ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
gb|ADN34025.1| DNA polymerase III gamma-tau subunit [Cucumis mel...   120   2e-25

>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score =  200 bits (509), Expect = 9e-50
 Identities = 105/148 (70%), Positives = 112/148 (75%)
 Frame = +1

Query: 1    DILAGTYDFTKEXXXXXXXXXQPLSKEDMEKLRQALKTLSEAEKQLRMSNDKXXXXXXXX 180
            DILAGTYDF K+           LSKEDMEKLRQALKTLSEAEKQLRMSNDK        
Sbjct: 742  DILAGTYDFRKDRRRRKFFRRPLLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAAL 801

Query: 181  XXXXPDQQYVLPTSSDNSFNHSPLPLKNGDIKEAARTTGNPVEIPNKVRRMSMDARIENF 360
                PDQQYVLPTSSDNSFNHSP  LK+ D +EAAR TGNPV+IPNK RR+SMDARIEN 
Sbjct: 802  LQLAPDQQYVLPTSSDNSFNHSPFALKDADAREAARLTGNPVDIPNKGRRLSMDARIENV 861

Query: 361  HAGSSADGMTKGHSSEKRRLSVSGLAPQ 444
            HAGSSADGMT+G  SEK+R SVSG  PQ
Sbjct: 862  HAGSSADGMTRGLGSEKKRHSVSGFTPQ 889


>ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
            gi|355482867|gb|AES64070.1| DNA polymerase III subunit
            gamma/tau [Medicago truncatula]
          Length = 1177

 Score =  181 bits (459), Expect = 6e-44
 Identities = 99/148 (66%), Positives = 106/148 (71%)
 Frame = +1

Query: 1    DILAGTYDFTKEXXXXXXXXXQPLSKEDMEKLRQALKTLSEAEKQLRMSNDKXXXXXXXX 180
            DILAGTYDFTKE         QPLSKEDMEKLRQALKTLSEAEKQLRMSNDK        
Sbjct: 749  DILAGTYDFTKERCRRKFFRRQPLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAAL 808

Query: 181  XXXXPDQQYVLPTSSDNSFNHSPLPLKNGDIKEAARTTGNPVEIPNKVRRMSMDARIENF 360
                PDQQY LPTSSDNSFNHSP  L NG++KEA R TGNPVEI N+ RRMSMDAR+E+ 
Sbjct: 809  LQLAPDQQYGLPTSSDNSFNHSPFALNNGNVKEATRNTGNPVEILNRTRRMSMDARMESS 868

Query: 361  HAGSSADGMTKGHSSEKRRLSVSGLAPQ 444
            +AGSSAD          RR S+SG APQ
Sbjct: 869  NAGSSAD----------RRHSLSGYAPQ 886


>ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|222860456|gb|EEE98003.1|
            predicted protein [Populus trichocarpa]
          Length = 1190

 Score =  143 bits (361), Expect = 1e-32
 Identities = 81/153 (52%), Positives = 99/153 (64%), Gaps = 5/153 (3%)
 Frame = +1

Query: 1    DILAGTYDFTKEXXXXXXXXXQPLSKEDMEKLRQALKTLSEAEKQLRMSNDKXXXXXXXX 180
            DILAG+YDFTKE          PLSK+DMEKLRQALKTLSEAEKQLRMSNDK        
Sbjct: 738  DILAGSYDFTKERPRRKFFRRNPLSKDDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAAL 797

Query: 181  XXXXPDQQYVLPTSS-DNSFNHSPLPLKNGDIKEAARTTGNPVEIPNKVRRMSMDARIEN 357
                PDQQY+LP+SS + SFNHSPL L N   ++ AR  G  VE+PN  R +S   R+EN
Sbjct: 798  LQLAPDQQYLLPSSSTETSFNHSPLALNNMGGRDIARKGGERVEMPNNKRGLSTHVRLEN 857

Query: 358  FHAGSSAD----GMTKGHSSEKRRLSVSGLAPQ 444
               G+SA+    G T G + +++R + SG+A Q
Sbjct: 858  LPGGTSANFQNSGSTNGINMDRKRNAASGMASQ 890


>ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|222848688|gb|EEE86235.1|
            predicted protein [Populus trichocarpa]
          Length = 1188

 Score =  136 bits (342), Expect = 2e-30
 Identities = 80/153 (52%), Positives = 98/153 (64%), Gaps = 5/153 (3%)
 Frame = +1

Query: 1    DILAGTYDFTKEXXXXXXXXXQPLSKEDMEKLRQALKTLSEAEKQLRMSNDKXXXXXXXX 180
            DILAG+YDFTKE         +PLSKEDMEKLRQALKTLSEAEKQLRMSNDK        
Sbjct: 734  DILAGSYDFTKERPRRKFFRRKPLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAAL 793

Query: 181  XXXXPDQQYVLPTSS-DNSFNHSPLPLKNGDIKEAARTTGNPVEIPNKVRRMSMDARIEN 357
                PDQQY+LP+SS + SFNHSPL   N   ++ +R  G   E+PN  R + M  R+E+
Sbjct: 794  LQLAPDQQYLLPSSSTETSFNHSPLAQNNMGGRDISR-KGGEHEMPNNGRDLPMHVRLES 852

Query: 358  FHAGSSAD----GMTKGHSSEKRRLSVSGLAPQ 444
               G+SAD    G T G S +++R + S +APQ
Sbjct: 853  LPGGTSADFRNNGSTNGTSIDRKRNAASVMAPQ 885


>gb|ADN34025.1| DNA polymerase III gamma-tau subunit [Cucumis melo subsp. melo]
          Length = 1170

 Score =  120 bits (300), Expect = 2e-25
 Identities = 70/148 (47%), Positives = 90/148 (60%)
 Frame = +1

Query: 1    DILAGTYDFTKEXXXXXXXXXQPLSKEDMEKLRQALKTLSEAEKQLRMSNDKXXXXXXXX 180
            DILAG+YDF KE         QPLSKEDMEKLRQALKTLSEAEKQLRMSNDK        
Sbjct: 741  DILAGSYDFKKERPRRKFFRRQPLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAAL 800

Query: 181  XXXXPDQQYVLPTSSDNSFNHSPLPLKNGDIKEAARTTGNPVEIPNKVRRMSMDARIENF 360
                PDQQY+L +S++ SFNHSPL L N   + A+R      +I    + +  D +    
Sbjct: 801  LQLAPDQQYMLSSSAETSFNHSPLALNNVSGRGASRNVDQHGQISAGEKGLPTDVKFAG- 859

Query: 361  HAGSSADGMTKGHSSEKRRLSVSGLAPQ 444
            H+ S  + ++KG S +++R S   ++PQ
Sbjct: 860  HSDSFDNRISKGISLDRKRHSGVCVSPQ 887


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