BLASTX nr result
ID: Glycyrrhiza24_contig00014473
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00014473
(997 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003610579.1| Pentatricopeptide repeat-containing protein ... 477 e-132
ref|XP_003529674.1| PREDICTED: pentatricopeptide repeat-containi... 447 e-123
ref|XP_003549331.1| PREDICTED: pentatricopeptide repeat-containi... 444 e-122
emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera] 425 e-117
ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containi... 425 e-116
>ref|XP_003610579.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511634|gb|AES92776.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 706
Score = 477 bits (1228), Expect = e-132
Identities = 241/332 (72%), Positives = 273/332 (82%), Gaps = 9/332 (2%)
Frame = -2
Query: 969 MAYRLCSTPXXXXXXXXXXXXXSRKFKVRNFIPSFQTPSS--------LTPHSKTFLHAN 814
M+Y LCS+ RKFK+RNF SF TPSS LTPHSKT LH
Sbjct: 1 MSYHLCSSSSPLFHDPLTISS--RKFKLRNFPSSFHTPSSSSSSSSSSLTPHSKTLLH-- 56
Query: 813 HVSLQEPIPQQLAQGVISEEHANSEDPLGKS-SSKSSYIWVNPKSPRAKQLGKISYDAKY 637
+SLQE IPQQ Q S++ A ++P+G S SSKSSYIWVNPKSPRAKQLGK SYDA+Y
Sbjct: 57 -ISLQESIPQQQPQDANSQKDAKFDNPIGNSTSSKSSYIWVNPKSPRAKQLGKKSYDARY 115
Query: 636 TSLVNLARSLDSCNPTEHDVSEVLKGLGDKVLEQDAVIVINNMVNSVTAPLVLEYFQRKI 457
+SLV L+ +LDSC PTEHDVS++LK LGDKV+EQDAVI+INNM NSV P VL+Y QRK
Sbjct: 116 SSLVKLSNALDSCEPTEHDVSQILKCLGDKVIEQDAVIIINNMENSVVVPFVLQYVQRKS 175
Query: 456 TPTREVILYNVTLKVFRKCKDLDGAEKLFDQMLERGVRPDNITFSTIISCARMCYLPNKA 277
PTREVILYNVTLKVFRKCKDLDGAEK+F +ML+RGV+PDN+TFSTIISCAR CYLP+KA
Sbjct: 176 IPTREVILYNVTLKVFRKCKDLDGAEKVFGEMLQRGVKPDNVTFSTIISCARSCYLPDKA 235
Query: 276 VEWYEKMPSFGCEPDDLTYSVMIDAYGRAGNIDMALNLYDRARTEKWRIDTVTFSTLIKM 97
VEW+EKMP FGCEPDD+TYSVMID+YG+AG+IDMALNLYDRARTEKWRI+ TFSTLIKM
Sbjct: 236 VEWFEKMPLFGCEPDDVTYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPATFSTLIKM 295
Query: 96 YGLAGNYDGCLNVYEEMKALGVEPNLVVYNTL 1
YG+AGNYDGCLNVYEEMKALGV+PNLVVYNTL
Sbjct: 296 YGVAGNYDGCLNVYEEMKALGVKPNLVVYNTL 327
Score = 66.2 bits (160), Expect = 1e-08
Identities = 41/146 (28%), Positives = 73/146 (50%)
Frame = -2
Query: 438 ILYNVTLKVFRKCKDLDGAEKLFDQMLERGVRPDNITFSTIISCARMCYLPNKAVEWYEK 259
+ Y+V + + K D+D A L+D+ R + TFST+I + + + YE+
Sbjct: 252 VTYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPATFSTLIKMYGVAGNYDGCLNVYEE 311
Query: 258 MPSFGCEPDDLTYSVMIDAYGRAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLAGN 79
M + G +P+ + Y+ ++DA GRA A +Y + T+++L+ YG A
Sbjct: 312 MKALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEMINNDILPNRATYASLLHAYGRARF 371
Query: 78 YDGCLNVYEEMKALGVEPNLVVYNTL 1
+ L VY EM+ ++ N +YN+L
Sbjct: 372 CEDALVVYREMREKEMDLNTHLYNSL 397
Score = 61.6 bits (148), Expect = 3e-07
Identities = 33/135 (24%), Positives = 72/135 (53%)
Frame = -2
Query: 444 EVILYNVTLKVFRKCKDLDGAEKLFDQMLERGVRPDNITFSTIISCARMCYLPNKAVEWY 265
E ++ +K++ + DG ++++M GV+P+ + ++T++ P +A Y
Sbjct: 285 EPATFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQARTIY 344
Query: 264 EKMPSFGCEPDDLTYSVMIDAYGRAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLA 85
++M + P+ TY+ ++ AYGRA + AL +Y R ++ ++T +++L+ M
Sbjct: 345 KEMINNDILPNRATYASLLHAYGRARFCEDALVVYREMREKEMDLNTHLYNSLLAMCADV 404
Query: 84 GNYDGCLNVYEEMKA 40
G D ++E+MK+
Sbjct: 405 GYTDLAFEIFEDMKS 419
>ref|XP_003529674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 685
Score = 447 bits (1150), Expect = e-123
Identities = 231/325 (71%), Positives = 256/325 (78%), Gaps = 2/325 (0%)
Frame = -2
Query: 969 MAYRLCSTPXXXXXXXXXXXXXS--RKFKVRNFIPSFQTPSSLTPHSKTFLHANHVSLQE 796
MAY LCS+P S RKFK+RN + SSLTPHSKT LH + + E
Sbjct: 1 MAYNLCSSPSSLFHDLPSISSSSSSRKFKLRNL-----SSSSLTPHSKTLLHVS-LHEHE 54
Query: 795 PIPQQLAQGVISEEHANSEDPLGKSSSKSSYIWVNPKSPRAKQLGKISYDAKYTSLVNLA 616
PIP+ L D SSSKS+YIWVNP+SPRAKQL SYDA+YTSLVNLA
Sbjct: 55 PIPEHLPP-----------DAKSSSSSKSNYIWVNPRSPRAKQLESRSYDARYTSLVNLA 103
Query: 615 RSLDSCNPTEHDVSEVLKGLGDKVLEQDAVIVINNMVNSVTAPLVLEYFQRKITPTREVI 436
SLDSCNP++ DVS VLK LGD+V+EQDAVIVINNM NS P VL YFQR+I PTREVI
Sbjct: 104 HSLDSCNPSQEDVSLVLKDLGDRVIEQDAVIVINNMSNSRVVPFVLNYFQRRIRPTREVI 163
Query: 435 LYNVTLKVFRKCKDLDGAEKLFDQMLERGVRPDNITFSTIISCARMCYLPNKAVEWYEKM 256
LYNVTLKVFRK KDLD EKLFD+ML+RGVRPDN+TFSTIISCAR+C LPNKAVEW+EKM
Sbjct: 164 LYNVTLKVFRKSKDLDAMEKLFDEMLQRGVRPDNVTFSTIISCARICSLPNKAVEWFEKM 223
Query: 255 PSFGCEPDDLTYSVMIDAYGRAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLAGNY 76
SFGCEPDD+TYS MIDAYGRAGNIDMAL LYDRARTEKWR+DTVTFSTLIKMYGLAGNY
Sbjct: 224 SSFGCEPDDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDTVTFSTLIKMYGLAGNY 283
Query: 75 DGCLNVYEEMKALGVEPNLVVYNTL 1
DGCLNVY+EMK LGV+PN+V+YNTL
Sbjct: 284 DGCLNVYQEMKVLGVKPNMVIYNTL 308
Score = 76.6 bits (187), Expect = 8e-12
Identities = 42/146 (28%), Positives = 78/146 (53%)
Frame = -2
Query: 438 ILYNVTLKVFRKCKDLDGAEKLFDQMLERGVRPDNITFSTIISCARMCYLPNKAVEWYEK 259
+ Y+ + + + ++D A +L+D+ R D +TFST+I + + + Y++
Sbjct: 233 VTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDTVTFSTLIKMYGLAGNYDGCLNVYQE 292
Query: 258 MPSFGCEPDDLTYSVMIDAYGRAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLAGN 79
M G +P+ + Y+ ++DA GRA A ++Y + + VT+++L++ YG
Sbjct: 293 MKVLGVKPNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFSPNWVTYASLLRAYGRGRY 352
Query: 78 YDGCLNVYEEMKALGVEPNLVVYNTL 1
+ L VY+EMK G+E N +YNTL
Sbjct: 353 SEDALFVYKEMKEKGMEMNTHLYNTL 378
Score = 61.6 bits (148), Expect = 3e-07
Identities = 31/134 (23%), Positives = 70/134 (52%)
Frame = -2
Query: 444 EVILYNVTLKVFRKCKDLDGAEKLFDQMLERGVRPDNITFSTIISCARMCYLPNKAVEWY 265
+ + ++ +K++ + DG ++ +M GV+P+ + ++T++ P +A Y
Sbjct: 266 DTVTFSTLIKMYGLAGNYDGCLNVYQEMKVLGVKPNMVIYNTLLDAMGRAKRPWQAKSIY 325
Query: 264 EKMPSFGCEPDDLTYSVMIDAYGRAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLA 85
+M + G P+ +TY+ ++ AYGR + AL +Y + + ++T ++TL+ M
Sbjct: 326 TEMTNNGFSPNWVTYASLLRAYGRGRYSEDALFVYKEMKEKGMEMNTHLYNTLLAMCADL 385
Query: 84 GNYDGCLNVYEEMK 43
G + ++E+MK
Sbjct: 386 GLANEAFEIFEDMK 399
>ref|XP_003549331.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Glycine max]
Length = 689
Score = 444 bits (1143), Expect = e-122
Identities = 232/326 (71%), Positives = 257/326 (78%), Gaps = 3/326 (0%)
Frame = -2
Query: 969 MAYRLCSTPXXXXXXXXXXXXXS---RKFKVRNFIPSFQTPSSLTPHSKTFLHANHVSLQ 799
MAY LCS+P S RKFK+RN FQ S TPHSKT LH VSL
Sbjct: 1 MAYNLCSSPSSLFHDLPSISSSSSSCRKFKLRNSSSFFQPSPSPTPHSKTLLH---VSLH 57
Query: 798 EPIPQQLAQGVISEEHANSEDPLGKSSSKSSYIWVNPKSPRAKQLGKISYDAKYTSLVNL 619
EPIP+ L HANS SSSKS+YIWVNP+SPRAKQL + SYDA+YTSLVNL
Sbjct: 58 EPIPEHLPP------HANSS-----SSSKSNYIWVNPRSPRAKQLERRSYDARYTSLVNL 106
Query: 618 ARSLDSCNPTEHDVSEVLKGLGDKVLEQDAVIVINNMVNSVTAPLVLEYFQRKITPTREV 439
A SLDSCNP++ DVS VLK L +V+EQDAVIVINNM N P VL YFQR+I PTREV
Sbjct: 107 ALSLDSCNPSQEDVSLVLKDLWGRVIEQDAVIVINNMSNPRVVPFVLNYFQRRIRPTREV 166
Query: 438 ILYNVTLKVFRKCKDLDGAEKLFDQMLERGVRPDNITFSTIISCARMCYLPNKAVEWYEK 259
ILYNVTLKVFRK KDLD EKLFD+ML+RGVRPDN++FSTIISCAR+C LPNKAVEW+EK
Sbjct: 167 ILYNVTLKVFRKSKDLDAMEKLFDEMLQRGVRPDNVSFSTIISCARICSLPNKAVEWFEK 226
Query: 258 MPSFGCEPDDLTYSVMIDAYGRAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLAGN 79
MPSF CEPDD+TYS MIDAYGRAGNIDMAL LYDRARTEKWR+D+VTFSTLIKMYGLAGN
Sbjct: 227 MPSFRCEPDDVTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDSVTFSTLIKMYGLAGN 286
Query: 78 YDGCLNVYEEMKALGVEPNLVVYNTL 1
YDGCLNVY+EMKALGV+ N+V+YNTL
Sbjct: 287 YDGCLNVYQEMKALGVKSNMVIYNTL 312
Score = 73.2 bits (178), Expect = 9e-11
Identities = 40/146 (27%), Positives = 78/146 (53%)
Frame = -2
Query: 438 ILYNVTLKVFRKCKDLDGAEKLFDQMLERGVRPDNITFSTIISCARMCYLPNKAVEWYEK 259
+ Y+ + + + ++D A +L+D+ R D++TFST+I + + + Y++
Sbjct: 237 VTYSAMIDAYGRAGNIDMALRLYDRARTEKWRLDSVTFSTLIKMYGLAGNYDGCLNVYQE 296
Query: 258 MPSFGCEPDDLTYSVMIDAYGRAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLAGN 79
M + G + + + Y+ ++DA GRA A ++Y + + T+++L++ YG
Sbjct: 297 MKALGVKSNMVIYNTLLDAMGRAKRPWQAKSIYTEMTNNGFLPNWATYASLLRAYGRGRY 356
Query: 78 YDGCLNVYEEMKALGVEPNLVVYNTL 1
+ L VY+EMK G+E N +YNTL
Sbjct: 357 SEDALFVYKEMKEKGMEMNTHLYNTL 382
Score = 58.9 bits (141), Expect = 2e-06
Identities = 31/133 (23%), Positives = 68/133 (51%)
Frame = -2
Query: 438 ILYNVTLKVFRKCKDLDGAEKLFDQMLERGVRPDNITFSTIISCARMCYLPNKAVEWYEK 259
+ ++ +K++ + DG ++ +M GV+ + + ++T++ P +A Y +
Sbjct: 272 VTFSTLIKMYGLAGNYDGCLNVYQEMKALGVKSNMVIYNTLLDAMGRAKRPWQAKSIYTE 331
Query: 258 MPSFGCEPDDLTYSVMIDAYGRAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLAGN 79
M + G P+ TY+ ++ AYGR + AL +Y + + ++T ++TL+ M G
Sbjct: 332 MTNNGFLPNWATYASLLRAYGRGRYSEDALFVYKEMKEKGMEMNTHLYNTLLAMCADLGL 391
Query: 78 YDGCLNVYEEMKA 40
D ++E+MK+
Sbjct: 392 ADDAFKIFEDMKS 404
>emb|CAN63129.1| hypothetical protein VITISV_001456 [Vitis vinifera]
Length = 701
Score = 425 bits (1093), Expect = e-117
Identities = 213/326 (65%), Positives = 256/326 (78%), Gaps = 3/326 (0%)
Frame = -2
Query: 969 MAYRLCSTPXXXXXXXXXXXXXS---RKFKVRNFIPSFQTPSSLTPHSKTFLHANHVSLQ 799
MAY LCS+P RK ++R+F P+SL+ HS+TFL HVSL+
Sbjct: 1 MAYHLCSSPSSLCHDHHYLHNSLSFSRKSRLRSFNSFSFKPNSLSLHSRTFLQITHVSLE 60
Query: 798 EPIPQQLAQGVISEEHANSEDPLGKSSSKSSYIWVNPKSPRAKQLGKISYDAKYTSLVNL 619
+PIPQ+ Q + NS+DP K+ S YIWVNP+SPRA +L + SYDA+Y SLV +
Sbjct: 61 DPIPQE-TQKADASNPPNSQDPDRKTKS---YIWVNPRSPRASKLRQHSYDARYASLVKI 116
Query: 618 ARSLDSCNPTEHDVSEVLKGLGDKVLEQDAVIVINNMVNSVTAPLVLEYFQRKITPTREV 439
A SLDSC TE DVS+VL+ LGDK+LEQDAVIV+NNM N TA L +F++++ P+REV
Sbjct: 117 AESLDSCEATEEDVSQVLRCLGDKILEQDAVIVLNNMTNPETALLAFGFFRKRLKPSREV 176
Query: 438 ILYNVTLKVFRKCKDLDGAEKLFDQMLERGVRPDNITFSTIISCARMCYLPNKAVEWYEK 259
ILYNVTLKVFRKC++LD AEKLFD+MLERGV+PDNITFSTIISCAR+ LPNKAVEW+EK
Sbjct: 177 ILYNVTLKVFRKCRNLDXAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEK 236
Query: 258 MPSFGCEPDDLTYSVMIDAYGRAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLAGN 79
MP FGC PDD+TYS MIDAYGRAGN+DMAL LYDRARTEKWRID VTFSTLI++YG++GN
Sbjct: 237 MPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGN 296
Query: 78 YDGCLNVYEEMKALGVEPNLVVYNTL 1
+DGCLNVYEEMKALGV+PNLV+YNTL
Sbjct: 297 FDGCLNVYEEMKALGVKPNLVIYNTL 322
Score = 62.4 bits (150), Expect = 2e-07
Identities = 31/135 (22%), Positives = 71/135 (52%)
Frame = -2
Query: 438 ILYNVTLKVFRKCKDLDGAEKLFDQMLERGVRPDNITFSTIISCARMCYLPNKAVEWYEK 259
+ ++ ++++ + DG ++++M GV+P+ + ++T++ P +A Y++
Sbjct: 282 VTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKE 341
Query: 258 MPSFGCEPDDLTYSVMIDAYGRAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLAGN 79
M + G + TY+ ++ AYGRA + AL +Y + + + V ++TL+ M G
Sbjct: 342 MTNNGLQLSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGY 401
Query: 78 YDGCLNVYEEMKALG 34
+ ++E+MK+ G
Sbjct: 402 TEEAAAIFEDMKSSG 416
>ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 425 bits (1092), Expect = e-116
Identities = 213/326 (65%), Positives = 256/326 (78%), Gaps = 3/326 (0%)
Frame = -2
Query: 969 MAYRLCSTPXXXXXXXXXXXXXS---RKFKVRNFIPSFQTPSSLTPHSKTFLHANHVSLQ 799
MAY LCS+P RK ++R+F P+SL+ HS+TFL HVSL+
Sbjct: 1 MAYHLCSSPSSLCHDHHYLHNSLSFSRKSRLRSFNSFSFKPNSLSLHSRTFLQITHVSLE 60
Query: 798 EPIPQQLAQGVISEEHANSEDPLGKSSSKSSYIWVNPKSPRAKQLGKISYDAKYTSLVNL 619
+PIPQ+ Q + NS+DP K+ S YIWVNP+SPRA +L + SYDA+Y SLV +
Sbjct: 61 DPIPQE-TQKADASNPPNSQDPDRKTKS---YIWVNPRSPRASKLRQHSYDARYASLVKI 116
Query: 618 ARSLDSCNPTEHDVSEVLKGLGDKVLEQDAVIVINNMVNSVTAPLVLEYFQRKITPTREV 439
A SLDSC TE DVS+VL+ LGDK+LEQDAVIV+NNM N TA L +F++++ P+REV
Sbjct: 117 AESLDSCEATEEDVSQVLRCLGDKILEQDAVIVLNNMTNPETALLAFGFFRKRLKPSREV 176
Query: 438 ILYNVTLKVFRKCKDLDGAEKLFDQMLERGVRPDNITFSTIISCARMCYLPNKAVEWYEK 259
ILYNVTLKVFRKC++LD AEKLFD+MLERGV+PDNITFSTIISCAR+ LPNKAVEW+EK
Sbjct: 177 ILYNVTLKVFRKCRNLDRAEKLFDEMLERGVKPDNITFSTIISCARVSSLPNKAVEWFEK 236
Query: 258 MPSFGCEPDDLTYSVMIDAYGRAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLAGN 79
MP FGC PDD+TYS MIDAYGRAGN+DMAL LYDRARTEKWRID VTFSTLI++YG++GN
Sbjct: 237 MPEFGCHPDDVTYSAMIDAYGRAGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGN 296
Query: 78 YDGCLNVYEEMKALGVEPNLVVYNTL 1
+DGCLNVYEEMKALGV+PNLV+YNTL
Sbjct: 297 FDGCLNVYEEMKALGVKPNLVIYNTL 322
Score = 66.2 bits (160), Expect = 1e-08
Identities = 32/135 (23%), Positives = 72/135 (53%)
Frame = -2
Query: 438 ILYNVTLKVFRKCKDLDGAEKLFDQMLERGVRPDNITFSTIISCARMCYLPNKAVEWYEK 259
+ ++ ++++ + DG ++++M GV+P+ + ++T++ P +A Y++
Sbjct: 282 VTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVIYNTLLDAMGRAKRPWQAKNIYKE 341
Query: 258 MPSFGCEPDDLTYSVMIDAYGRAGNIDMALNLYDRARTEKWRIDTVTFSTLIKMYGLAGN 79
M + G +P TY+ ++ AYGRA + AL +Y + + + V ++TL+ M G
Sbjct: 342 MTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGY 401
Query: 78 YDGCLNVYEEMKALG 34
+ ++E+MK+ G
Sbjct: 402 TEEAAAIFEDMKSSG 416