BLASTX nr result

ID: Glycyrrhiza24_contig00014429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014429
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530683.1| PREDICTED: uncharacterized protein LOC100797...   305   1e-80
ref|NP_001241316.1| uncharacterized protein LOC100806084 [Glycin...   295   1e-77
ref|XP_003629698.1| Mediator of RNA polymerase II transcription ...   278   1e-72
gb|AFK42425.1| unknown [Lotus japonicus]                              275   1e-71
ref|XP_003629699.1| Mediator of RNA polymerase II transcription ...   273   5e-71

>ref|XP_003530683.1| PREDICTED: uncharacterized protein LOC100797517 [Glycine max]
          Length = 269

 Score =  305 bits (780), Expect = 1e-80
 Identities = 169/228 (74%), Positives = 180/228 (78%)
 Frame = -3

Query: 967 LLLIGAFSPALFVSLSRSCDSVGVPFAEPSVYRKTQMDSSQXXXXXXXXXXXXXGTLISQ 788
           L+L    SPAL +++S S             +RK QMDSSQ             GTLISQ
Sbjct: 49  LVLSPKLSPALQLAVSGSGH-------HQVFFRKLQMDSSQSAALGGNGGSGGNGTLISQ 101

Query: 787 INDKXXXXXXXXXSMQKLNQVSNSIQKTLGLIHQLYLTVSTFNAAFQMPLLQRINGLVAE 608
            ND          SMQKLNQVSNSIQKTLGLIHQLYLTVSTFNAAFQMPLLQRINGLVAE
Sbjct: 102 NNDMAASATGADDSMQKLNQVSNSIQKTLGLIHQLYLTVSTFNAAFQMPLLQRINGLVAE 161

Query: 607 LDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTRDVINNCIAKNQITKGKTDALKTLRKN 428
           LDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFT+DVIN+CI KNQITKGKTDALK+LRK+
Sbjct: 162 LDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTKDVINSCIVKNQITKGKTDALKSLRKH 221

Query: 427 LLEELEQNFPDEVETFRESRAASAAELKRMAQAQSVLPNGDVRVKAEH 284
           LLEELE NFPDEVETFRESRAA+AAELKR AQAQS LPNGDVRVK+EH
Sbjct: 222 LLEELEHNFPDEVETFRESRAAAAAELKRQAQAQSALPNGDVRVKSEH 269


>ref|NP_001241316.1| uncharacterized protein LOC100806084 [Glycine max]
           gi|255645729|gb|ACU23358.1| unknown [Glycine max]
          Length = 190

 Score =  295 bits (755), Expect = 1e-77
 Identities = 159/192 (82%), Positives = 165/192 (85%)
 Frame = -3

Query: 859 MDSSQXXXXXXXXXXXXXGTLISQINDKXXXXXXXXXSMQKLNQVSNSIQKTLGLIHQLY 680
           MDSSQ             GTLISQIND          SMQKLNQVSNSIQKTLGLIHQLY
Sbjct: 1   MDSSQSAALGGNGGSGGNGTLISQINDMAASATGADDSMQKLNQVSNSIQKTLGLIHQLY 60

Query: 679 LTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTRDV 500
           LTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFT+DV
Sbjct: 61  LTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTKDV 120

Query: 499 INNCIAKNQITKGKTDALKTLRKNLLEELEQNFPDEVETFRESRAASAAELKRMAQAQSV 320
           IN+CIAKNQITKGKTDALK+LRK+LLEELEQNFPDEVETFRESR A+AAELKR  QAQS 
Sbjct: 121 INSCIAKNQITKGKTDALKSLRKHLLEELEQNFPDEVETFRESRTAAAAELKR--QAQSA 178

Query: 319 LPNGDVRVKAEH 284
           LPNGDVRVK+EH
Sbjct: 179 LPNGDVRVKSEH 190


>ref|XP_003629698.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355523720|gb|AET04174.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 186

 Score =  278 bits (712), Expect = 1e-72
 Identities = 144/173 (83%), Positives = 153/173 (88%)
 Frame = -3

Query: 802 TLISQINDKXXXXXXXXXSMQKLNQVSNSIQKTLGLIHQLYLTVSTFNAAFQMPLLQRIN 623
           TLIS  ND          SMQ L+Q+SNSI+KTLGLIHQL LTVSTFN+A QMPLLQRIN
Sbjct: 14  TLISHGNDAAASASGADDSMQNLSQISNSIEKTLGLIHQLSLTVSTFNSALQMPLLQRIN 73

Query: 622 GLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTRDVINNCIAKNQITKGKTDALK 443
           GLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFT+DVINNCIAKNQITKGKTDALK
Sbjct: 74  GLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTKDVINNCIAKNQITKGKTDALK 133

Query: 442 TLRKNLLEELEQNFPDEVETFRESRAASAAELKRMAQAQSVLPNGDVRVKAEH 284
            LRK+LLEELEQNFPDEVETFRE+RAA+AAELKR+AQA SVLPNGD R K EH
Sbjct: 134 DLRKHLLEELEQNFPDEVETFRENRAAAAAELKRLAQAPSVLPNGDARAKVEH 186


>gb|AFK42425.1| unknown [Lotus japonicus]
          Length = 191

 Score =  275 bits (703), Expect = 1e-71
 Identities = 147/192 (76%), Positives = 157/192 (81%)
 Frame = -3

Query: 859 MDSSQXXXXXXXXXXXXXGTLISQINDKXXXXXXXXXSMQKLNQVSNSIQKTLGLIHQLY 680
           MDSSQ             G++  Q ND           MQ+LNQVSNSIQKTLGLIHQLY
Sbjct: 1   MDSSQSAALGGNGRSGGNGSVNFQTNDTSVPAGADAS-MQELNQVSNSIQKTLGLIHQLY 59

Query: 679 LTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTRDV 500
           LTVSTFNAAFQMPLL+RINGLV ELDNMVKLAEKCNI VPMEVVNLIDDGKNPDEFT+DV
Sbjct: 60  LTVSTFNAAFQMPLLERINGLVEELDNMVKLAEKCNIHVPMEVVNLIDDGKNPDEFTKDV 119

Query: 499 INNCIAKNQITKGKTDALKTLRKNLLEELEQNFPDEVETFRESRAASAAELKRMAQAQSV 320
           INNCIAKNQITKGKTD LK LRK LL ELEQNFPDEVET+RE+RAA+AAELKRMAQAQ+V
Sbjct: 120 INNCIAKNQITKGKTDGLKNLRKQLLGELEQNFPDEVETYRETRAAAAAELKRMAQAQNV 179

Query: 319 LPNGDVRVKAEH 284
           L NGD RVK+EH
Sbjct: 180 LSNGDARVKSEH 191


>ref|XP_003629699.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355523721|gb|AET04175.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 154

 Score =  273 bits (698), Expect = 5e-71
 Identities = 137/154 (88%), Positives = 146/154 (94%)
 Frame = -3

Query: 745 MQKLNQVSNSIQKTLGLIHQLYLTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQ 566
           MQ L+Q+SNSI+KTLGLIHQL LTVSTFN+A QMPLLQRINGLVAELDNMVKLAEKCNIQ
Sbjct: 1   MQNLSQISNSIEKTLGLIHQLSLTVSTFNSALQMPLLQRINGLVAELDNMVKLAEKCNIQ 60

Query: 565 VPMEVVNLIDDGKNPDEFTRDVINNCIAKNQITKGKTDALKTLRKNLLEELEQNFPDEVE 386
           VPMEVVNLIDDGKNPDEFT+DVINNCIAKNQITKGKTDALK LRK+LLEELEQNFPDEVE
Sbjct: 61  VPMEVVNLIDDGKNPDEFTKDVINNCIAKNQITKGKTDALKDLRKHLLEELEQNFPDEVE 120

Query: 385 TFRESRAASAAELKRMAQAQSVLPNGDVRVKAEH 284
           TFRE+RAA+AAELKR+AQA SVLPNGD R K EH
Sbjct: 121 TFRENRAAAAAELKRLAQAPSVLPNGDARAKVEH 154


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