BLASTX nr result

ID: Glycyrrhiza24_contig00014413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014413
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like...   286   2e-75
ref|XP_003520385.1| PREDICTED: uncharacterized protein LOC100797...   250   1e-64
ref|XP_003530103.1| PREDICTED: uncharacterized protein LOC100812...   249   2e-64
ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|2...   193   2e-47
ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257...   190   1e-46

>ref|XP_003626832.1| Retrograde Golgi transport protein RGP1-like protein [Medicago
           truncatula] gi|355520854|gb|AET01308.1| Retrograde Golgi
           transport protein RGP1-like protein [Medicago
           truncatula]
          Length = 529

 Score =  286 bits (731), Expect = 2e-75
 Identities = 143/184 (77%), Positives = 156/184 (84%)
 Frame = -2

Query: 552 MLQGRFSLFGGGDSRLVDXXXXXSXXXXXXXXXXXXXXXTDRQVYRPGDPVIVTIQISNP 373
           ML+GR S FGGGDS L+D     +                D+QVYRPGDPVI+TIQISNP
Sbjct: 1   MLKGRLSFFGGGDSGLLDKNSSKNEEIVPTLKLET-----DKQVYRPGDPVIITIQISNP 55

Query: 372 SNGYSFLMERLSFEIKGIEKLDTQWFVTQKPLPGSKQRRGEHVFLDSSTPILVANQIVNA 193
           SNGYSFLMERLSFEI+GIEKLDTQWF TQKPLPGS+QRRGEHVF+DSSTPILVANQI+NA
Sbjct: 56  SNGYSFLMERLSFEIRGIEKLDTQWFATQKPLPGSRQRRGEHVFVDSSTPILVANQIINA 115

Query: 192 GASKSYVVRTLLPNIIPPSYKGSNIRYLYYVKSAVTGGWLILENGQSRAESTNDVTNLEV 13
           G SKSYVVRT+LP+IIPPSYKGSNIRYLYYVKSA+TGGWLILENGQSR E TNDVT+LEV
Sbjct: 116 GTSKSYVVRTMLPSIIPPSYKGSNIRYLYYVKSAITGGWLILENGQSRTEPTNDVTDLEV 175

Query: 12  RIPL 1
           RIPL
Sbjct: 176 RIPL 179


>ref|XP_003520385.1| PREDICTED: uncharacterized protein LOC100797213 [Glycine max]
          Length = 194

 Score =  250 bits (639), Expect = 1e-64
 Identities = 131/183 (71%), Positives = 144/183 (78%), Gaps = 5/183 (2%)
 Frame = -2

Query: 552 MLQGRFSLFGGG-DSRLV----DXXXXXSXXXXXXXXXXXXXXXTDRQVYRPGDPVIVTI 388
           ML GRFS FGGG DS  V    +                     TDRQVYRPGDPVIVTI
Sbjct: 1   MLPGRFSFFGGGGDSGAVVDNANSSPSKGGGDELAVVQPTLKLETDRQVYRPGDPVIVTI 60

Query: 387 QISNPSNGYSFLMERLSFEIKGIEKLDTQWFVTQKPLPGSKQRRGEHVFLDSSTPILVAN 208
           QISNP+NGYSFLMERL FEI+GIEKLDTQWF TQK +PGSKQRRGE+ FL+ STPIL+AN
Sbjct: 61  QISNPANGYSFLMERLGFEIRGIEKLDTQWFATQKLMPGSKQRRGENAFLECSTPILIAN 120

Query: 207 QIVNAGASKSYVVRTLLPNIIPPSYKGSNIRYLYYVKSAVTGGWLILENGQSRAESTNDV 28
           QI+NAGASKSYVVRT LP+IIPPSYKGSNIRYLYY+KSA+TGGW+I ENGQSR ES NDV
Sbjct: 121 QILNAGASKSYVVRTQLPSIIPPSYKGSNIRYLYYIKSALTGGWIIYENGQSRLESKNDV 180

Query: 27  TNL 19
           T+L
Sbjct: 181 TDL 183


>ref|XP_003530103.1| PREDICTED: uncharacterized protein LOC100812423 [Glycine max]
          Length = 576

 Score =  249 bits (637), Expect = 2e-64
 Identities = 130/183 (71%), Positives = 143/183 (78%), Gaps = 5/183 (2%)
 Frame = -2

Query: 552 MLQGRFSLFGGG-DSRLV----DXXXXXSXXXXXXXXXXXXXXXTDRQVYRPGDPVIVTI 388
           ML GRFS FGGG DS  V    +                     TDRQVYRPGDPVIVTI
Sbjct: 1   MLSGRFSFFGGGGDSGAVVDNTNSSPSKCGEEQLAVVQPTLKLETDRQVYRPGDPVIVTI 60

Query: 387 QISNPSNGYSFLMERLSFEIKGIEKLDTQWFVTQKPLPGSKQRRGEHVFLDSSTPILVAN 208
           QISNP+ GYSFLMERL FEI+GIEKLDTQWF TQKP+PGSKQ+RGEH FL+ STP+LVAN
Sbjct: 61  QISNPAKGYSFLMERLGFEIRGIEKLDTQWFATQKPMPGSKQKRGEHAFLECSTPVLVAN 120

Query: 207 QIVNAGASKSYVVRTLLPNIIPPSYKGSNIRYLYYVKSAVTGGWLILENGQSRAESTNDV 28
           QIVNAGASKSYVVRT LP+IIPPSYKGS+IRYLYY+KSA+TG W+I ENGQSRAE  NDV
Sbjct: 121 QIVNAGASKSYVVRTQLPSIIPPSYKGSSIRYLYYIKSALTGEWIIYENGQSRAEIKNDV 180

Query: 27  TNL 19
           T+L
Sbjct: 181 TDL 183


>ref|XP_002310656.1| predicted protein [Populus trichocarpa] gi|222853559|gb|EEE91106.1|
           predicted protein [Populus trichocarpa]
          Length = 533

 Score =  193 bits (491), Expect = 2e-47
 Identities = 100/184 (54%), Positives = 128/184 (69%), Gaps = 6/184 (3%)
 Frame = -2

Query: 534 SLFGGGDSRLVDXXXXXSXXXXXXXXXXXXXXXTDRQVYRPGDPVIVTIQISNPSNGYS- 358
           + FG G SR VD                      D+ VYRPGD ++VTI+ISNP +G S 
Sbjct: 3   AFFGSGGSRKVDNSSDGRKDELVPTLKVQT----DKDVYRPGDSILVTIEISNPKDGASE 58

Query: 357 -----FLMERLSFEIKGIEKLDTQWFVTQKPLPGSKQRRGEHVFLDSSTPILVANQIVNA 193
                 L+E+L F I+GI+KLD QWF TQKPLPGSKQRRGEHVF+D ST  +V+NQIV++
Sbjct: 59  DVMSSLLIEKLGFAIRGIQKLDNQWFATQKPLPGSKQRRGEHVFMDCSTSSIVSNQIVSS 118

Query: 192 GASKSYVVRTLLPNIIPPSYKGSNIRYLYYVKSAVTGGWLILENGQSRAESTNDVTNLEV 13
           GA+K+YVVRTLLP+IIPPSY+G+ IRY+YYV+S ++G  L+L+N  S  ES+ D+  LE 
Sbjct: 119 GATKTYVVRTLLPSIIPPSYRGATIRYIYYVESTLSGQQLMLDNTNSHRESSKDLLQLED 178

Query: 12  RIPL 1
           RIPL
Sbjct: 179 RIPL 182


>ref|XP_002277216.1| PREDICTED: uncharacterized protein LOC100257645 [Vitis vinifera]
           gi|297737934|emb|CBI27135.3| unnamed protein product
           [Vitis vinifera]
          Length = 552

 Score =  190 bits (483), Expect = 1e-46
 Identities = 101/193 (52%), Positives = 124/193 (64%), Gaps = 14/193 (7%)
 Frame = -2

Query: 537 FSLFGGGDSRLVDXXXXXSXXXXXXXXXXXXXXXTDRQVYRPGDPVIVTIQISNPSNGYS 358
           FS FG GDS         S               TD+ VYRPG+ ++V+I+I NPS    
Sbjct: 10  FSFFGSGDSNKA----YDSVGGGKSELVPSLKLRTDKDVYRPGESIVVSIEIHNPSGVVD 65

Query: 357 --------------FLMERLSFEIKGIEKLDTQWFVTQKPLPGSKQRRGEHVFLDSSTPI 220
                          L+E LSFEIKGIEKLD+QW+ TQKPLPGSKQRRGEH FLD +TP 
Sbjct: 66  ELSKKENAGDVLCPLLVEMLSFEIKGIEKLDSQWYATQKPLPGSKQRRGEHTFLDCATPS 125

Query: 219 LVANQIVNAGASKSYVVRTLLPNIIPPSYKGSNIRYLYYVKSAVTGGWLILENGQSRAES 40
           +V+NQIV+AGA K+YV RT LP+I+PPSY+G+ IRY YYV+  ++G WL+LENG S  ES
Sbjct: 126 IVSNQIVSAGAVKTYVARTELPSIVPPSYRGATIRYFYYVRCTLSGRWLVLENGHSPRES 185

Query: 39  TNDVTNLEVRIPL 1
             D+  LE RIPL
Sbjct: 186 RKDLIELEARIPL 198


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