BLASTX nr result

ID: Glycyrrhiza24_contig00014399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014399
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543616.1| PREDICTED: protein CHUP1, chloroplastic-like...    86   7e-15
ref|XP_003597655.1| Protein CHUP1 [Medicago truncatula] gi|35548...    82   6e-14
ref|XP_003546609.1| PREDICTED: protein CHUP1, chloroplastic-like...    78   1e-12
ref|XP_003533034.1| PREDICTED: uncharacterized protein LOC100781...    66   6e-09

>ref|XP_003543616.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 608

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 54/104 (51%), Positives = 64/104 (61%), Gaps = 11/104 (10%)
 Frame = +2

Query: 335 IKPSPKSLMGRPSGHGSETNLEGDTGEVLSTCSTVSE--------EEKGINRLRSENSPI 490
           IKPS KS  G    H +E NL G  G  LSTC+ +SE        EE  INR+ S+ S I
Sbjct: 37  IKPS-KSRKGCSFSHENEDNLGGGIGAALSTCNAISEGNFLCSSFEEACINRVISDESRI 95

Query: 491 A---SSKQNGDKDEFLLPEFNELVKQVDFEATTVGDSLKKDVEA 613
           A    S Q GDKDEFLLPEFN+LVK +DF A  V +S K+D+EA
Sbjct: 96  ALSSDSTQKGDKDEFLLPEFNDLVKDMDFGAIIVRNSFKEDMEA 139


>ref|XP_003597655.1| Protein CHUP1 [Medicago truncatula] gi|355486703|gb|AES67906.1|
           Protein CHUP1 [Medicago truncatula]
          Length = 542

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 43/73 (58%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
 Frame = +2

Query: 362 GRPSGHGSETNLEGDTGEVLSTCSTVSEEEKGINRLRSENS---PIASSKQNGDKDEFLL 532
           GR  GH SE NL GD G   ST +TVSEEE      R++NS   P + S+QNGD+DEFLL
Sbjct: 40  GRSLGHESEVNLGGDIGATFSTSNTVSEEETCTRGSRNKNSLIAPFSCSEQNGDRDEFLL 99

Query: 533 PEFNELVKQVDFE 571
           PEF+ELVK+V+FE
Sbjct: 100 PEFDELVKEVEFE 112


>ref|XP_003546609.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 595

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 9/77 (11%)
 Frame = +2

Query: 410 GEVLSTCSTVSE------EEKGINRLRSENSPIA---SSKQNGDKDEFLLPEFNELVKQV 562
           G  LSTC+ +SE      EE  IN++ S+ SPI+    S QNGD+DEFLLPEFN+LVK V
Sbjct: 50  GAALSTCNAISEGNFLCSEETCINKVISDKSPISLSPDSTQNGDEDEFLLPEFNDLVKDV 109

Query: 563 DFEATTVGDSLKKDVEA 613
           DFEAT V +S K+D+ A
Sbjct: 110 DFEATVVRNSFKEDMGA 126


>ref|XP_003533034.1| PREDICTED: uncharacterized protein LOC100781632 [Glycine max]
          Length = 639

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
 Frame = +2

Query: 368 PSGHGSETNLEGDTGEVLSTCSTVSEE------EKGINRLRSENSPIASS---KQNGDKD 520
           PSGHG + N         S+CSTVSEE      E  I ++  +NSP   S   +Q+G+KD
Sbjct: 54  PSGHGKDDNFGRGKRVASSSCSTVSEENVLDNEETCIGKVIRKNSPSGPSPRTRQSGEKD 113

Query: 521 EFLLPEFNELVKQVDFEATTVGDSLKK 601
           EFLL EFN+L K+ DF A   G S K+
Sbjct: 114 EFLLLEFNDLTKEADFGANISGSSFKE 140


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