BLASTX nr result

ID: Glycyrrhiza24_contig00014343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014343
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|35552...    84   2e-14
ref|XP_003613526.1| F-box protein [Medicago truncatula] gi|35551...    80   2e-13
ref|XP_003617994.1| F-box/kelch-repeat protein [Medicago truncat...    77   1e-12
ref|XP_003615546.1| F-box/kelch-repeat protein [Medicago truncat...    75   4e-12
ref|XP_003588454.1| F-box protein [Medicago truncatula] gi|35547...    75   4e-12

>ref|XP_003628685.1| F-box protein [Medicago truncatula] gi|355522707|gb|AET03161.1|
           F-box protein [Medicago truncatula]
          Length = 384

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/70 (57%), Positives = 48/70 (68%)
 Frame = -1

Query: 217 VSNHIPDNLAFXXXXXXXXXXXKRFGCVHKSWALLFENPHFMNIYCNNLISYDHPYYDDT 38
           VSNHIPD++AF           KRF CV KSW  LFENP+F++++CNN I  DH +YDDT
Sbjct: 8   VSNHIPDDVAFFILSKLSLKALKRFTCVRKSWVHLFENPNFISMFCNNFILKDHSFYDDT 67

Query: 37  SLLLLQTVWG 8
            LLL QTV G
Sbjct: 68  CLLLKQTVPG 77


>ref|XP_003613526.1| F-box protein [Medicago truncatula] gi|355514861|gb|AES96484.1|
           F-box protein [Medicago truncatula]
          Length = 455

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/65 (56%), Positives = 45/65 (69%)
 Frame = -1

Query: 211 NHIPDNLAFXXXXXXXXXXXKRFGCVHKSWALLFENPHFMNIYCNNLISYDHPYYDDTSL 32
           +HI ++L F           KRFGCVHKSW+LLF+NPHFM +Y NNL++ DH YY DTS 
Sbjct: 6   SHISNDLFFSLLSKLPIKSLKRFGCVHKSWSLLFDNPHFMTMYRNNLLTKDHSYYHDTSF 65

Query: 31  LLLQT 17
           LL QT
Sbjct: 66  LLHQT 70


>ref|XP_003617994.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355519329|gb|AET00953.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 269

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/65 (53%), Positives = 47/65 (72%)
 Frame = -1

Query: 211 NHIPDNLAFXXXXXXXXXXXKRFGCVHKSWALLFENPHFMNIYCNNLISYDHPYYDDTSL 32
           +HIP++L F           KRFGCVHKSW+LLF+N +FM +Y N+ ++ +HPYYDDTS+
Sbjct: 21  SHIPNDLFFFILSKMSIKSLKRFGCVHKSWSLLFDNLYFMTMYRNSFLTKNHPYYDDTSV 80

Query: 31  LLLQT 17
           LL QT
Sbjct: 81  LLHQT 85


>ref|XP_003615546.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355516881|gb|AES98504.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 465

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/65 (52%), Positives = 46/65 (70%)
 Frame = -1

Query: 211 NHIPDNLAFXXXXXXXXXXXKRFGCVHKSWALLFENPHFMNIYCNNLISYDHPYYDDTSL 32
           +HIP++L+F           KRFGCVHKSW+LL +NP+FM +Y  + ++ DH YYD+TSL
Sbjct: 24  SHIPNDLSFSILSKLPIKPLKRFGCVHKSWSLLLDNPYFMTMYRYHFVTKDHSYYDNTSL 83

Query: 31  LLLQT 17
           LL QT
Sbjct: 84  LLHQT 88


>ref|XP_003588454.1| F-box protein [Medicago truncatula] gi|355477502|gb|AES58705.1|
           F-box protein [Medicago truncatula]
          Length = 403

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/68 (54%), Positives = 45/68 (66%)
 Frame = -1

Query: 217 VSNHIPDNLAFXXXXXXXXXXXKRFGCVHKSWALLFENPHFMNIYCNNLISYDHPYYDDT 38
           V+ HIP++L F           KRFGCV KS+ALLFENP+FMN+YCNN IS    Y DDT
Sbjct: 18  VNKHIPNDLIFFVLSKLPLKSLKRFGCVSKSYALLFENPNFMNMYCNNFISNSPSYCDDT 77

Query: 37  SLLLLQTV 14
            LLL + +
Sbjct: 78  CLLLQEII 85


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