BLASTX nr result

ID: Glycyrrhiza24_contig00014339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014339
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623391.1| Integrator complex subunit [Medicago truncat...   205   5e-51
ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249...   160   1e-37
emb|CBI18100.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002526688.1| conserved hypothetical protein [Ricinus comm...   142   5e-32
ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31

>ref|XP_003623391.1| Integrator complex subunit [Medicago truncatula]
           gi|355498406|gb|AES79609.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 906

 Score =  205 bits (521), Expect = 5e-51
 Identities = 114/189 (60%), Positives = 133/189 (70%), Gaps = 4/189 (2%)
 Frame = -1

Query: 562 QTLTRSPQLTHHAVKLLSDLAAHHPSLSQPALDSLLRATTESRTRLAVDALASVSE---- 395
           +TLT S   +HH + LLS     HPSLS       L+ TT       VD+LAS+S+    
Sbjct: 43  KTLTNSQNPSHHTLTLLS-----HPSLSH------LQTTT------TVDSLASISQLPSS 85

Query: 394 PGLELEDEHFVSLCFGSSVAGRLWMVRNAGWRVGVRPALLFAVLLGLTKDPYPYVRASSL 215
               L+DE FVSLCFG S++GR+WM+RNAG    VRPALLF VLLG T DPYP VRA+SL
Sbjct: 86  KPFVLDDERFVSLCFGPSISGRVWMLRNAGLGFNVRPALLFTVLLGFTNDPYPNVRAASL 145

Query: 214 EGLVGLSERGVFQDVSLVKGCYQRALQLLTDMEDCVRFSAVRVVASWGLMLAASNADMKA 35
           EGLV LSE G F DVS++ GCYQR +QLL DMED VR +AVRVV SWGLML+A NADMKA
Sbjct: 146 EGLVRLSECGEFNDVSMINGCYQRGVQLLNDMEDDVRLAAVRVVTSWGLMLSAFNADMKA 205

Query: 34  YWCNEVFAK 8
           YW N+VFAK
Sbjct: 206 YWGNDVFAK 214


>ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera]
          Length = 1007

 Score =  160 bits (405), Expect = 1e-37
 Identities = 91/195 (46%), Positives = 121/195 (62%), Gaps = 12/195 (6%)
 Frame = -1

Query: 556 LTRSPQLTHHAVKLLSDLAAHHPSLSQPALDSLLRATTES-RTRLAVDALA--------- 407
           LT  P+  HH +KLLSD+A HH  LS     S+      S  TRL+ ++LA         
Sbjct: 57  LTTEPRALHHTLKLLSDIAFHHSRLSGLVFHSVRSYLLRSDSTRLSAESLAVLSSIAEHD 116

Query: 406 -SVSEPGLELEDEHFVSLCFGSSVAGRLWMVRNAGWRVGVRPALLFAVLLGLTKDPYPYV 230
            S++    EL+D  FVSLCFG SV+ R W + NA +R  +RP +L  V+LG TKDPYPYV
Sbjct: 117 RSLASAMDELDDRFFVSLCFGPSVSVRSWFLSNA-FRFPIRPYVLLTVMLGFTKDPYPYV 175

Query: 229 RASSLEGLVGLSERGVFQDVSLVKGCYQRALQLLTDMEDCVRFSAVRVVASWGLMLAASN 50
           R  +L+GLVGLS+  V +D  +++GCY RA++LL D ED VR +AV  V+ WG ML AS 
Sbjct: 176 RRVALDGLVGLSKSSVIEDCGVIEGCYCRAVELLGDAEDSVRCAAVHAVSEWGKMLVASV 235

Query: 49  ADM-KAYWCNEVFAK 8
            +M K YW + VF +
Sbjct: 236 QEMNKRYWSDAVFVR 250


>emb|CBI18100.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  160 bits (405), Expect = 1e-37
 Identities = 91/195 (46%), Positives = 121/195 (62%), Gaps = 12/195 (6%)
 Frame = -1

Query: 556 LTRSPQLTHHAVKLLSDLAAHHPSLSQPALDSLLRATTES-RTRLAVDALA--------- 407
           LT  P+  HH +KLLSD+A HH  LS     S+      S  TRL+ ++LA         
Sbjct: 57  LTTEPRALHHTLKLLSDIAFHHSRLSGLVFHSVRSYLLRSDSTRLSAESLAVLSSIAEHD 116

Query: 406 -SVSEPGLELEDEHFVSLCFGSSVAGRLWMVRNAGWRVGVRPALLFAVLLGLTKDPYPYV 230
            S++    EL+D  FVSLCFG SV+ R W + NA +R  +RP +L  V+LG TKDPYPYV
Sbjct: 117 RSLASAMDELDDRFFVSLCFGPSVSVRSWFLSNA-FRFPIRPYVLLTVMLGFTKDPYPYV 175

Query: 229 RASSLEGLVGLSERGVFQDVSLVKGCYQRALQLLTDMEDCVRFSAVRVVASWGLMLAASN 50
           R  +L+GLVGLS+  V +D  +++GCY RA++LL D ED VR +AV  V+ WG ML AS 
Sbjct: 176 RRVALDGLVGLSKSSVIEDCGVIEGCYCRAVELLGDAEDSVRCAAVHAVSEWGKMLVASV 235

Query: 49  ADM-KAYWCNEVFAK 8
            +M K YW + VF +
Sbjct: 236 QEMNKRYWSDAVFVR 250


>ref|XP_002526688.1| conserved hypothetical protein [Ricinus communis]
           gi|223533988|gb|EEF35710.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 890

 Score =  142 bits (357), Expect = 5e-32
 Identities = 84/194 (43%), Positives = 120/194 (61%), Gaps = 11/194 (5%)
 Frame = -1

Query: 562 QTLTRSPQLTHHAV------KLLSDLAAHHPSLSQPALDSLLRATTESRTRLAVDALASV 401
           + LTRS  LT H++      KLL+D+A+  P LS     S+   T +  +   + AL S+
Sbjct: 43  EALTRSLNLTTHSLTRQRTLKLLTDVASRRPYLSSLIFQSIHSITLDFES---LAALCSI 99

Query: 400 SEPG----LELEDEHFVSLCFGSSVAGRLWMVRNAGWRVGVRPALLFAVLLGLTKDPYPY 233
           SE      +EL D  F+S+CF +    RL ++RN G R+GV   +L  V LG +KDPYPY
Sbjct: 100 SELNKNLKVELVDRLFISMCFDAPACERLRLLRN-GERLGVGVHVLLTVFLGFSKDPYPY 158

Query: 232 VRASSLEGLVGLSERGVFQDVSLVKGCYQRALQLLTDMEDCVRFSAVRVVASWGLMLAAS 53
           VR  +L GLV L + GVF+D S+++GCY+R ++LL D +DCVR +AV +V+ WGLML A+
Sbjct: 159 VRKEALNGLVSLCKYGVFEDKSVIEGCYRRGVELLKDADDCVRSAAVNLVSEWGLMLIAA 218

Query: 52  NADM-KAYWCNEVF 14
           N +  K  W + VF
Sbjct: 219 NQEEDKTDWFDTVF 232


>ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|222867661|gb|EEF04792.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score =  140 bits (354), Expect = 1e-31
 Identities = 85/198 (42%), Positives = 126/198 (63%), Gaps = 13/198 (6%)
 Frame = -1

Query: 562 QTLTRSPQLTHHAVKLLSDLAAHHPSLSQPALDSL----------LRATTESRTRLAVDA 413
           Q  T S    HH +KLL+DLA+H   LS   L+++          ++  TES T LA  A
Sbjct: 54  QLRTNSLTTHHHILKLLTDLASHRTHLSSQILNTIHYSSLLFTESIQIATESLTSLASIA 113

Query: 412 LASVSEPGLELEDEHFVSLCFGS-SVAGRLWMVRNAGWRVGVRPALLFAVLLGLTKDPYP 236
            +  ++    ++D+ F+SLCF + S + RL ++RN G R+G+   +LF + LG T+DPYP
Sbjct: 114 NSDHNK----IDDQLFMSLCFAATSTSARLRLLRN-GERLGIGMHVLFTMFLGFTEDPYP 168

Query: 235 YVRASSLEGLVGLSERG-VFQDVSLVKGCYQRALQLLTDMEDCVRFSAVRVVASWGLML- 62
           YVR +SL+GL+GL + G VF+D+S+++GCY RA++LL D E  VR +A+RVV+ WG ML 
Sbjct: 169 YVRKASLDGLLGLCKSGNVFEDISVIEGCYFRAVELLQDNEHSVRSAAIRVVSEWGQMLI 228

Query: 61  AASNADMKAYWCNEVFAK 8
           AA   + K  W N+VF +
Sbjct: 229 AAKEENDKIDWSNQVFVQ 246


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