BLASTX nr result

ID: Glycyrrhiza24_contig00014276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014276
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulg...   164   5e-39
ref|XP_002446122.1| hypothetical protein SORBIDRAFT_06g002025 [S...    56   3e-06

>ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435151|ref|YP_004222369.1| hypothetical
           protein BevumaM_p136 [Beta vulgaris subsp. maritima]
           gi|346683242|ref|YP_004842174.1| hypothetical protein
           BemaM_p130 [Beta macrocarpa] gi|9049306|dbj|BAA99316.1|
           orf107b [Beta vulgaris subsp. vulgaris]
           gi|317905601|emb|CBJ14008.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439884|emb|CBJ17584.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148038|emb|CBJ20702.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500160|emb|CBX24979.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977914|emb|CBL54138.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 107

 Score =  164 bits (416), Expect = 5e-39
 Identities = 82/91 (90%), Positives = 85/91 (93%)
 Frame = -3

Query: 387 PNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSQAFSSTSPLQSSIKLAFPRRYEMGVFP 208
           PNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPS+AFSST PLQSSIKLAF RR EMGVFP
Sbjct: 18  PNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTFPLQSSIKLAFSRRSEMGVFP 77

Query: 207 SPIVCIGLASSRTKEAFWRARACRKADHYIS 115
           SPIVCIGLASSR+K  + RARACRKADHYIS
Sbjct: 78  SPIVCIGLASSRSK-LYLRARACRKADHYIS 107


>ref|XP_002446122.1| hypothetical protein SORBIDRAFT_06g002025 [Sorghum bicolor]
           gi|241937305|gb|EES10450.1| hypothetical protein
           SORBIDRAFT_06g002025 [Sorghum bicolor]
          Length = 132

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/28 (85%), Positives = 24/28 (85%)
 Frame = -3

Query: 387 PNHHTTRIDANPPRYRTCDSHRIRLAQR 304
           PNHHTT IDANPP YRTCDSHRIRL  R
Sbjct: 21  PNHHTTCIDANPPPYRTCDSHRIRLTVR 48


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