BLASTX nr result

ID: Glycyrrhiza24_contig00014159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014159
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544503.1| PREDICTED: squalene monooxygenase-like [Glyc...    87   1e-15
ref|XP_003556956.1| PREDICTED: squalene monooxygenase-like [Glyc...    77   1e-12
emb|CAD23248.1| squalene monooxygenase 2 [Medicago truncatula]         75   6e-12
gb|ABC94943.1| squalene epoxidase [Medicago sativa]                    64   1e-08
ref|XP_003525962.1| PREDICTED: squalene monooxygenase-like [Glyc...    63   3e-08

>ref|XP_003544503.1| PREDICTED: squalene monooxygenase-like [Glycine max]
          Length = 526

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/61 (72%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
 Frame = +1

Query: 163 MVDPYVLGWILSSVLSLFALYSLVFAGKG-SRASPEKATQFEDSVTTTAGECRSEKLNGD 339
           M DPYVLGWIL SVLSL ALYSL F G G  RASPEK  +  ++VTT+AGECRSEK NGD
Sbjct: 1   MEDPYVLGWILCSVLSLLALYSLAFGGAGRRRASPEKRNELSETVTTSAGECRSEKRNGD 60

Query: 340 A 342
           A
Sbjct: 61  A 61


>ref|XP_003556956.1| PREDICTED: squalene monooxygenase-like [Glycine max]
          Length = 526

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
 Frame = +1

Query: 163 MVDPYVLGWILSSVLSLFALYSLVFAGKG-SRASPEKATQFEDSVTTTAGECRSEKLNGD 339
           M D  VLGWIL S LSLFALYSL F G   +RASPEK  +  ++VTT+AGECRSEK +GD
Sbjct: 1   MADLSVLGWILCSALSLFALYSLAFGGASRNRASPEKRNELSETVTTSAGECRSEKHHGD 60

Query: 340 A 342
           A
Sbjct: 61  A 61


>emb|CAD23248.1| squalene monooxygenase 2 [Medicago truncatula]
          Length = 526

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 40/60 (66%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
 Frame = +1

Query: 166 VDPYVLGWILSSVLSLFALYSLVFAGKGSRASPEKATQFEDSVTTT-AGECRSEKLNGDA 342
           +D Y +GWILSSVLSLFALY+L+FAGK +    EK  Q EDSVT+T AGE +S+KLNGDA
Sbjct: 1   MDLYNIGWILSSVLSLFALYNLIFAGKKNYDVNEKVNQREDSVTSTDAGEIKSDKLNGDA 60


>gb|ABC94943.1| squalene epoxidase [Medicago sativa]
          Length = 524

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/60 (60%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
 Frame = +1

Query: 166 VDPYVLGWILSSVLSLFALYSLVFAGKGSRASPEKATQFEDSVTTT-AGECRSEKLNGDA 342
           +D Y +GWILSSVLSLFALY+L+F+GK  R   +   + +DSVT+T AG+ +SEKLNGDA
Sbjct: 1   MDLYNIGWILSSVLSLFALYNLIFSGK--RNYHDVNDKVKDSVTSTDAGDIQSEKLNGDA 58


>ref|XP_003525962.1| PREDICTED: squalene monooxygenase-like [Glycine max]
          Length = 525

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = +1

Query: 163 MVDPYVLGWILSSVLSLFALYSLVFAGKG-SRASPEKATQFEDSVTTTAGECRSEKLNGD 339
           MVDPYVLGWI+ +VLSL AL +  FA K    +S   AT+  ++VTT AGECRS   +GD
Sbjct: 1   MVDPYVLGWIICAVLSLVALRNFAFARKNRCHSSETDATRRAENVTTAAGECRSSSRDGD 60


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