BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014152
         (1257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541521.1| PREDICTED: replication factor A protein 2-li...   378   e-102
ref|XP_003610102.1| Replication factor A protein [Medicago trunc...   333   5e-89
gb|AFK46093.1| unknown [Medicago truncatula]                          331   3e-88
emb|CBI17841.3| unnamed protein product [Vitis vinifera]              323   7e-86
ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subu...   320   6e-85

>ref|XP_003541521.1| PREDICTED: replication factor A protein 2-like [Glycine max]
          Length = 277

 Score =  378 bits (971), Expect = e-102
 Identities = 206/284 (72%), Positives = 222/284 (78%), Gaps = 5/284 (1%)
 Frame = -2

Query: 1124 MYSS--QFDGNAAFSGGGFMXXXXXXXXXXXXXXSRNRDAQSLLPLTIKQINDAFQSSDD 951
            MYSS  QFDGNAAFSGGGFM              S+NRDAQSLLPLT+KQI DA QSSDD
Sbjct: 1    MYSSASQFDGNAAFSGGGFMPSQTTQGPDSSFVPSKNRDAQSLLPLTVKQIYDASQSSDD 60

Query: 950  KSNNLIIDGVDVNTVTLVGRVCNKVGRITDVTFVLDDGTGRIECNKWLQEAADTNEVEGI 771
            K N LIIDGVDV  VTLVGRV NK GRITDVTFVLDDGTGRIECNKWL EA DTNE E I
Sbjct: 61   KIN-LIIDGVDVTNVTLVGRVSNKAGRITDVTFVLDDGTGRIECNKWLHEAVDTNEAEAI 119

Query: 770  LDGMYVRLNGHLKGFQGKRTFNVFSFRPVTDFSEIAYHFIDCIYVHLYNSRLRHLQSSIP 591
            L+GMY RL+G LK FQGKRT NVFSFRPVTDF+EIA HF DCIYVHLYNS+LR   +S+P
Sbjct: 120  LEGMYARLHGQLKHFQGKRTLNVFSFRPVTDFNEIASHFTDCIYVHLYNSKLR---TSVP 176

Query: 590  NQQQVTNSTPITPTKGYQALAVPP-NQFSGQHNHGQR--SVEDMVLDVLHLSTNREREEG 420
            NQQ   +S+PI PT GYQA  VPP NQFS QH +GQ+  +VE MVLD LH   N  R EG
Sbjct: 177  NQQ---HSSPIPPTIGYQAQVVPPTNQFSDQHVNGQKGVTVEAMVLDFLHHPANSSRNEG 233

Query: 419  VPRDLIAQHLGIPLDRLMLAIKNLIEEGAIYEAIADHYKSIING 288
            V RD IAQHLGI LD+LMLA+KNLI+EGAIYE I DHYKSIING
Sbjct: 234  VHRDHIAQHLGISLDKLMLAVKNLIDEGAIYETIGDHYKSIING 277


>ref|XP_003610102.1| Replication factor A protein [Medicago truncatula]
            gi|355511157|gb|AES92299.1| Replication factor A protein
            [Medicago truncatula]
          Length = 278

 Score =  333 bits (854), Expect = 5e-89
 Identities = 174/280 (62%), Positives = 210/280 (75%), Gaps = 1/280 (0%)
 Frame = -2

Query: 1124 MYSSQFDGNAAFSGGGFMXXXXXXXXXXXXXXSRNRDAQSLLPLTIKQINDAFQSSDDKS 945
            M+++QFDGNAAF+GGGFM              S+NR++Q+LLPLTIKQIN A QSSDD++
Sbjct: 1    MHANQFDGNAAFAGGGFMPSQTNQGGESSLTPSKNRESQTLLPLTIKQINHALQSSDDRT 60

Query: 944  NNLIIDGVDVNTVTLVGRVCNKVGRITDVTFVLDDGTGRIECNKWLQEAADTNEVEGILD 765
              L IDGV VNTVTLVGRVCNK G+IT+  FVLDDGTG IEC KWL E AD   VE IL+
Sbjct: 61   G-LTIDGVGVNTVTLVGRVCNKSGQITEFKFVLDDGTGTIECTKWLHEPADAMAVESILN 119

Query: 764  GMYVRLNGHLKGFQGKRTFNVFSFRPVTDFSEIAYHFIDCIYVHLYNSRLRHLQSSIPNQ 585
            GMYVRL G LKGFQGK T ++FS RPVTDF+EIA HFI+CIYVHLYNSRL++ Q+SIP+Q
Sbjct: 120  GMYVRLYGQLKGFQGK-TLSIFSLRPVTDFNEIASHFIECIYVHLYNSRLQYTQASIPSQ 178

Query: 584  QQVTNSTPITPTKGYQALAVPPNQFSGQHNHGQRSVEDMVLDVLHLSTNREREEGVPRDL 405
            Q   NS  ITPTKGYQA A+PPNQFSGQHN+GQ+SV+++VL+ L L T RE E GV    
Sbjct: 179  QHAPNSIQITPTKGYQAQAIPPNQFSGQHNNGQKSVQELVLEYLALPTIRELEGGVFCGT 238

Query: 404  IAQHLGIPLDRLMLAIKNLIE-EGAIYEAIADHYKSIING 288
            IA+ LG+ LD  ++   +L+  EG IYE +  HYK   +G
Sbjct: 239  IAKQLGVSLDNDVIPALDLLSGEGVIYEGLPKHYKICSDG 278


>gb|AFK46093.1| unknown [Medicago truncatula]
          Length = 278

 Score =  331 bits (848), Expect = 3e-88
 Identities = 174/280 (62%), Positives = 209/280 (74%), Gaps = 1/280 (0%)
 Frame = -2

Query: 1124 MYSSQFDGNAAFSGGGFMXXXXXXXXXXXXXXSRNRDAQSLLPLTIKQINDAFQSSDDKS 945
            M+++QFDGNAAF+GGGFM              S+NR++Q+LLPLTIKQIN A QSSDD++
Sbjct: 1    MHANQFDGNAAFAGGGFMPSQTNQGGESSLTPSKNRESQTLLPLTIKQINHAPQSSDDRT 60

Query: 944  NNLIIDGVDVNTVTLVGRVCNKVGRITDVTFVLDDGTGRIECNKWLQEAADTNEVEGILD 765
              L IDGV VNTVTLVGRVCNK G+IT+  FVLDDGTG IEC KWL E AD   VE IL+
Sbjct: 61   G-LTIDGVGVNTVTLVGRVCNKSGQITEFKFVLDDGTGTIECTKWLHEPADAMAVESILN 119

Query: 764  GMYVRLNGHLKGFQGKRTFNVFSFRPVTDFSEIAYHFIDCIYVHLYNSRLRHLQSSIPNQ 585
            GMYVRL G LKGFQGK T ++FS RPVTDF+EIA HFI+CIYVHLYNSRL++ Q+SIP+Q
Sbjct: 120  GMYVRLYGQLKGFQGK-TLSIFSLRPVTDFNEIASHFIECIYVHLYNSRLQYTQASIPSQ 178

Query: 584  QQVTNSTPITPTKGYQALAVPPNQFSGQHNHGQRSVEDMVLDVLHLSTNREREEGVPRDL 405
            Q   NS  ITPTKGYQA A+PPNQFSGQHN+GQ+SV ++VL+ L L T RE E GV    
Sbjct: 179  QHAPNSIQITPTKGYQAQAIPPNQFSGQHNNGQKSVRELVLEYLALPTIRELEGGVFCGT 238

Query: 404  IAQHLGIPLDRLMLAIKNLIE-EGAIYEAIADHYKSIING 288
            IA+ LG+ LD  ++   +L+  EG IYE +  HYK   +G
Sbjct: 239  IAKQLGVSLDNDVIPALDLLSGEGVIYEGLPKHYKICSDG 278


>emb|CBI17841.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  323 bits (827), Expect = 7e-86
 Identities = 169/281 (60%), Positives = 208/281 (74%), Gaps = 2/281 (0%)
 Frame = -2

Query: 1124 MYS-SQFDGNAAFSGGGFMXXXXXXXXXXXXXXSRNRDAQSLLPLTIKQINDAFQSSDDK 948
            MYS SQFDGNAAFSGGGFM              +RNRD Q+LLPLT+KQI++AF SSDDK
Sbjct: 1    MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60

Query: 947  SNNLIIDGVDVNTVTLVGRVCNKVGRITDVTFVLDDGTGRIECNKWLQEAADTNEVEGIL 768
            SN  +IDGV+VN VTLVG V NK  R+TDV F+LDDGTGRI+CN+W+ EA DT E+EGIL
Sbjct: 61   SN-FLIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGIL 119

Query: 767  DGMYVRLNGHLKGFQGKRTFNVFSFRPVTDFSEIAYHFIDCIYVHLYNSRLRHLQSSIPN 588
            DGMYVR++GHLKGFQGKR  NVFS RPVTDF+EIA HFI+CIYVH+YN++ R +Q+  P 
Sbjct: 120  DGMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSR-VQAGGPT 178

Query: 587  QQQVTNSTPITPTKGYQALAVPPNQFSGQHNHGQRSVEDMVLDVLHLSTNREREEGVPRD 408
            Q  VTN    TP KGYQ  A  PNQFSGQ+  G + V+ +V+D L    +  R++GV RD
Sbjct: 179  QSHVTNPAIGTPLKGYQ--ASQPNQFSGQYGAGLKGVDQLVIDYLQQPQSLARDQGVGRD 236

Query: 407  LIAQHLGIPLDRLMLAIKNLIEEGAIYEAIAD-HYKSIING 288
             +AQ L +P+D++M +I++L EEG IY  I + HYKS  NG
Sbjct: 237  ELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKSTGNG 277


>ref|XP_002268721.2| PREDICTED: replication protein A 32 kDa subunit [Vitis vinifera]
          Length = 275

 Score =  320 bits (819), Expect = 6e-85
 Identities = 168/281 (59%), Positives = 206/281 (73%), Gaps = 2/281 (0%)
 Frame = -2

Query: 1124 MYS-SQFDGNAAFSGGGFMXXXXXXXXXXXXXXSRNRDAQSLLPLTIKQINDAFQSSDDK 948
            MYS SQFDGNAAFSGGGFM              +RNRD Q+LLPLT+KQI++AF SSDDK
Sbjct: 1    MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60

Query: 947  SNNLIIDGVDVNTVTLVGRVCNKVGRITDVTFVLDDGTGRIECNKWLQEAADTNEVEGIL 768
            SN  +IDGV+VN VTLVG V NK  R+TDV F+LDDGTGRI+CN+W+ EA DT E+EGIL
Sbjct: 61   SN-FLIDGVEVNNVTLVGMVFNKAERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGIL 119

Query: 767  DGMYVRLNGHLKGFQGKRTFNVFSFRPVTDFSEIAYHFIDCIYVHLYNSRLRHLQSSIPN 588
            DGMYVR++GHLKGFQGKR  NVFS RPVTDF+EIA HFI+CIYVH+YN++ R   +  P 
Sbjct: 120  DGMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSR---AGGPT 176

Query: 587  QQQVTNSTPITPTKGYQALAVPPNQFSGQHNHGQRSVEDMVLDVLHLSTNREREEGVPRD 408
            Q  VTN    TP KGYQ  A  PNQFSGQ+  G + V+ +V+D L    +  R++GV RD
Sbjct: 177  QSHVTNPAIGTPLKGYQ--ASQPNQFSGQYGAGLKGVDQLVIDYLQQPQSLARDQGVGRD 234

Query: 407  LIAQHLGIPLDRLMLAIKNLIEEGAIYEAIAD-HYKSIING 288
             +AQ L +P+D++M +I++L EEG IY  I + HYKS  NG
Sbjct: 235  ELAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYKSTGNG 275