BLASTX nr result

ID: Glycyrrhiza24_contig00014140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014140
         (2140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241294.1| chromatin structure-remodeling complex prote...   457   e-126
gb|ABF85669.1| SNF5 [Pisum sativum]                                   457   e-126
ref|XP_003533363.1| PREDICTED: uncharacterized protein LOC100806...   453   e-125
gb|AFK36059.1| unknown [Lotus japonicus]                              450   e-124
ref|XP_003609906.1| Chromatin structure-remodeling complex prote...   449   e-123

>ref|NP_001241294.1| chromatin structure-remodeling complex protein BSH-like [Glycine max]
            gi|296932945|gb|ADH93593.1| SNF5-type
            chromatin-remodeling complex protein [Glycine max]
            gi|297179845|gb|ADI23919.1| SNF5 [Glycine max]
          Length = 240

 Score =  457 bits (1177), Expect = e-126
 Identities = 227/240 (94%), Positives = 233/240 (97%)
 Frame = +3

Query: 1179 MKTPVSGLYRNPVKFRMPTAENLVPIRLDIEIDGQRYKDAFTWNPSDPDSEVVVFAKRTV 1358
            MKTP+SG YRNPVKFRMPTAENLVPIRLDIEI+GQRYKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1    MKTPISGFYRNPVKFRMPTAENLVPIRLDIEIEGQRYKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 1359 KDLKLPPPFVTQIAQSIQSQLAEFRSYEGQDMYCGEKIVPIKLDLRVNHTLVKDQFLWDL 1538
            KDLKLPP FVTQIAQSIQSQL+EFRSYEGQDMY GEKIVPIKLDLRVNHTLVKDQFLWDL
Sbjct: 61   KDLKLPPAFVTQIAQSIQSQLSEFRSYEGQDMYAGEKIVPIKLDLRVNHTLVKDQFLWDL 120

Query: 1539 NNFESDPEEFARIFCKDMGIEDPEVGPSIAFAIREQLYEIAIQSVVSARESRLSKKGRRG 1718
            NNFESDPEEFARIFCKD GIEDPEVGP+IAFAIREQLYEIAIQSVVSARESR+SKKGRRG
Sbjct: 121  NNFESDPEEFARIFCKDTGIEDPEVGPAIAFAIREQLYEIAIQSVVSARESRMSKKGRRG 180

Query: 1719 TDYTPVSKGGAVAVDLVKLFGHKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNFR 1898
             +YTPVSKGGA AVDLVKLFG KSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNFR
Sbjct: 181  AEYTPVSKGGAAAVDLVKLFGPKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNFR 240


>gb|ABF85669.1| SNF5 [Pisum sativum]
          Length = 240

 Score =  457 bits (1177), Expect = e-126
 Identities = 224/240 (93%), Positives = 233/240 (97%)
 Frame = +3

Query: 1179 MKTPVSGLYRNPVKFRMPTAENLVPIRLDIEIDGQRYKDAFTWNPSDPDSEVVVFAKRTV 1358
            MKTP+SG YRNPVKFRMPT+ENLVP+RLDIEIDG RYKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1    MKTPISGFYRNPVKFRMPTSENLVPVRLDIEIDGHRYKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 1359 KDLKLPPPFVTQIAQSIQSQLAEFRSYEGQDMYCGEKIVPIKLDLRVNHTLVKDQFLWDL 1538
            KDLKLPPPFVTQIAQSIQSQLAEFRSYEGQDMY GEKI+PIKLDLRVNHTLVKDQFLWDL
Sbjct: 61   KDLKLPPPFVTQIAQSIQSQLAEFRSYEGQDMYAGEKIIPIKLDLRVNHTLVKDQFLWDL 120

Query: 1539 NNFESDPEEFARIFCKDMGIEDPEVGPSIAFAIREQLYEIAIQSVVSARESRLSKKGRRG 1718
            NNF+SDPEEFAR FC+DMGIEDPEVGP++AFAIREQLYEIAIQSVVSARESRLSKKGRRG
Sbjct: 121  NNFDSDPEEFARTFCRDMGIEDPEVGPAVAFAIREQLYEIAIQSVVSARESRLSKKGRRG 180

Query: 1719 TDYTPVSKGGAVAVDLVKLFGHKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNFR 1898
             D+TPVSKGGAVAVDLVKLFG KSSVVRKRKEWDVYEPIVDLLSNEEVD LEAKEERNFR
Sbjct: 181  ADFTPVSKGGAVAVDLVKLFGIKSSVVRKRKEWDVYEPIVDLLSNEEVDVLEAKEERNFR 240


>ref|XP_003533363.1| PREDICTED: uncharacterized protein LOC100806408 [Glycine max]
          Length = 298

 Score =  453 bits (1166), Expect = e-125
 Identities = 243/301 (80%), Positives = 261/301 (86%), Gaps = 4/301 (1%)
 Frame = -3

Query: 1097 MALRPIDNALPTT-PERPKKQPKIAVAVATQQQE---NQQVPVPLPSSGDATVDYLSSDN 930
            MALRPIDNALPTT PERPKKQPKIAVA   QQ     N +  VPLPSS DATVDY+SSDN
Sbjct: 1    MALRPIDNALPTTTPERPKKQPKIAVATQKQQDRASVNGENVVPLPSSEDATVDYVSSDN 60

Query: 929  LKPISDPEAKIQSLTEDLGSKNWTKVCESLNDVRRFALYHSTFLSPILGKIVLVVTKTMK 750
            LKP++DPE KIQSL EDL SKNW KVCESLNDVRRF+L HS+ L PILGKIVLVV KTM+
Sbjct: 61   LKPLADPEVKIQSLVEDLDSKNWIKVCESLNDVRRFSLLHSSLLFPILGKIVLVVAKTMR 120

Query: 749  NPRSALCKTSIMAAADIFNAFGDKLLDPSTSADAFDGXXXXXXLKASQDKRFVCEEAEKA 570
            NPRSALCKT+IMAAADIF+AFGDKLL+P TS DAFDG      LKASQDKRFVCEEA++A
Sbjct: 121  NPRSALCKTAIMAAADIFSAFGDKLLEPETS-DAFDGLLLQLLLKASQDKRFVCEEADRA 179

Query: 569  LDSMVGSMTPLPLLQKLRAYVSHTNLRVRAKAAVSLSNCVSKMGPEEMEEFGMAKLIEVA 390
            L  MVGSMTPLPLL+KLR YVSH NLRVRAKAAVSLSNCVSKMG EEME+FG+A+LIEVA
Sbjct: 180  LGIMVGSMTPLPLLKKLRVYVSHKNLRVRAKAAVSLSNCVSKMGLEEMEQFGLAELIEVA 239

Query: 389  ADLLNDRLPEARDAARSIATSVYEALIKDVEVELKMEVWQSFCQSKLPPIHALSILKIVK 210
            ADLLNDRLPEARDAARSIATS+YEAL KD E    ME+WQSFCQSKLPPIHALSILKIVK
Sbjct: 240  ADLLNDRLPEARDAARSIATSMYEALTKDSEE--MMELWQSFCQSKLPPIHALSILKIVK 297

Query: 209  P 207
            P
Sbjct: 298  P 298


>gb|AFK36059.1| unknown [Lotus japonicus]
          Length = 240

 Score =  450 bits (1158), Expect = e-124
 Identities = 225/240 (93%), Positives = 228/240 (95%)
 Frame = +3

Query: 1179 MKTPVSGLYRNPVKFRMPTAENLVPIRLDIEIDGQRYKDAFTWNPSDPDSEVVVFAKRTV 1358
            MK P S  YRNPVKFRMPTAENLVPIRLDIEID QRYKDAFTWNPSDPDSEV VFAKRTV
Sbjct: 1    MKAPASIFYRNPVKFRMPTAENLVPIRLDIEIDAQRYKDAFTWNPSDPDSEVGVFAKRTV 60

Query: 1359 KDLKLPPPFVTQIAQSIQSQLAEFRSYEGQDMYCGEKIVPIKLDLRVNHTLVKDQFLWDL 1538
            KDLKLPPPFVTQIAQSIQSQLAEFRSYEGQDMY GEKIVPIKLDLRVNHTLVKDQFLWDL
Sbjct: 61   KDLKLPPPFVTQIAQSIQSQLAEFRSYEGQDMYAGEKIVPIKLDLRVNHTLVKDQFLWDL 120

Query: 1539 NNFESDPEEFARIFCKDMGIEDPEVGPSIAFAIREQLYEIAIQSVVSARESRLSKKGRRG 1718
            NNFESDPEEFARIFCKDMGIEDPEVGP+IAFAIREQLYEI IQSVVS RESRLSKKGRRG
Sbjct: 121  NNFESDPEEFARIFCKDMGIEDPEVGPAIAFAIREQLYEITIQSVVSVRESRLSKKGRRG 180

Query: 1719 TDYTPVSKGGAVAVDLVKLFGHKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNFR 1898
             DYTP+SKGGAVAVDLVKLFG KSSV+RKRKEWDVYEPIVDLLSNEEVDALEAKEER FR
Sbjct: 181  GDYTPISKGGAVAVDLVKLFGQKSSVIRKRKEWDVYEPIVDLLSNEEVDALEAKEERIFR 240


>ref|XP_003609906.1| Chromatin structure-remodeling complex protein BSH [Medicago
            truncatula] gi|355510961|gb|AES92103.1| Chromatin
            structure-remodeling complex protein BSH [Medicago
            truncatula]
          Length = 240

 Score =  449 bits (1156), Expect = e-123
 Identities = 222/240 (92%), Positives = 230/240 (95%)
 Frame = +3

Query: 1179 MKTPVSGLYRNPVKFRMPTAENLVPIRLDIEIDGQRYKDAFTWNPSDPDSEVVVFAKRTV 1358
            MKTPVS  YRNPVKFRMPT+ENLVPIRLDIEIDG RYKDAFTWNPSDPDSEVVVFAKRTV
Sbjct: 1    MKTPVSAFYRNPVKFRMPTSENLVPIRLDIEIDGHRYKDAFTWNPSDPDSEVVVFAKRTV 60

Query: 1359 KDLKLPPPFVTQIAQSIQSQLAEFRSYEGQDMYCGEKIVPIKLDLRVNHTLVKDQFLWDL 1538
            +DLKLPPPFVTQIAQSIQSQLAEFRSY+GQDMY GEKIVPIKLDLRVNHTLVKDQFLWDL
Sbjct: 61   RDLKLPPPFVTQIAQSIQSQLAEFRSYDGQDMYAGEKIVPIKLDLRVNHTLVKDQFLWDL 120

Query: 1539 NNFESDPEEFARIFCKDMGIEDPEVGPSIAFAIREQLYEIAIQSVVSARESRLSKKGRRG 1718
            NNF+SDPEEFAR FC+DMGIEDPEVGP+IAFAIREQLYEI +QSVVSARESRLSKKGRRG
Sbjct: 121  NNFDSDPEEFARTFCRDMGIEDPEVGPAIAFAIREQLYEIVVQSVVSARESRLSKKGRRG 180

Query: 1719 TDYTPVSKGGAVAVDLVKLFGHKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNFR 1898
             D+ PVSKGGAVAVDLVKLFG KSSVVRKRKEWDVYEPIVDLLSNEEVD LEAKEERNFR
Sbjct: 181  ADFFPVSKGGAVAVDLVKLFGIKSSVVRKRKEWDVYEPIVDLLSNEEVDILEAKEERNFR 240


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