BLASTX nr result

ID: Glycyrrhiza24_contig00014131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014131
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236832.1| uncharacterized protein LOC100306054 [Glycin...    78   7e-13
ref|XP_002532881.1| DAG protein, chloroplast precursor, putative...    61   8e-08
ref|XP_002312591.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_003590806.1| Plastid protein [Medicago truncatula] gi|355...    56   3e-06
gb|ACJ85878.1| unknown [Medicago truncatula]                           56   3e-06

>ref|NP_001236832.1| uncharacterized protein LOC100306054 [Glycine max]
           gi|255627403|gb|ACU14046.1| unknown [Glycine max]
          Length = 241

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 54/110 (49%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
 Frame = -2

Query: 312 MARAVASSFTRRIPTLLTMRHFSTTTTTNA----LHKPSPLL--ARRFLFPITQSVPISQ 151
           MAR ++SS  R     L MR FS TTT  A    L KPS L   +RRFLFP+      S 
Sbjct: 1   MARVISSSCAR-----LAMRLFSATTTATAFAVTLPKPSSLSLSSRRFLFPL------SH 49

Query: 150 SVLTPAALFGGIRCQSNRSGDSAYSPLNXXXXXXXXXXXSDRPPTEMAPL 1
           +++ P+    GIRC+ NR+GDSAYSPLN           SDRPPTEMAPL
Sbjct: 50  AIVPPSTRVAGIRCRVNRAGDSAYSPLN---SGSSSSSFSDRPPTEMAPL 96


>ref|XP_002532881.1| DAG protein, chloroplast precursor, putative [Ricinus communis]
           gi|223527366|gb|EEF29510.1| DAG protein, chloroplast
           precursor, putative [Ricinus communis]
          Length = 248

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 46/118 (38%), Positives = 61/118 (51%), Gaps = 14/118 (11%)
 Frame = -2

Query: 312 MARAVASSFTRRIP-----------TLLTMRHFSTTTTTNALHKPSP---LLARRFLFPI 175
           MA+ +A SFTR +            T+ T    +TT+TT+ +  P P   L  RR L P+
Sbjct: 1   MAQTLARSFTRHLTFSLLLPKRLLSTITTTTTTATTSTTSIICPPLPPSLLFTRRSLLPL 60

Query: 174 TQSVPISQSVLTPAALFGGIRCQSNRSGDSAYSPLNXXXXXXXXXXXSDRPPTEMAPL 1
           + +V      + P   F  IRC+ NR+G+SAYSPLN           SDRPP EMAPL
Sbjct: 61  SHAV----HSIKPTR-FTSIRCRVNRAGNSAYSPLN------SGSNFSDRPPNEMAPL 107


>ref|XP_002312591.1| predicted protein [Populus trichocarpa] gi|222852411|gb|EEE89958.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/106 (37%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
 Frame = -2

Query: 312 MARAVASSFTRRIPTLLTMRHFSTTTTTNALHKPSP--LLARRFLFPITQSVPISQSVLT 139
           M   +A S T R   L  +      +T +  H PSP  LL  + L  ++ ++       +
Sbjct: 1   MTPTLARSLTTRHLNLCVLLPKRLLSTISITHLPSPPTLLCGQSLPSLSHNLQSINKTTS 60

Query: 138 PAALFGGIRCQSNRSGDSAYSPLNXXXXXXXXXXXSDRPPTEMAPL 1
           PAA F  IRC+ NR+G+S YSPLN           SDRPP EMAPL
Sbjct: 61  PAARFTSIRCRVNRAGNSGYSPLN------SGSNFSDRPPNEMAPL 100


>ref|XP_003590806.1| Plastid protein [Medicago truncatula] gi|355479854|gb|AES61057.1|
           Plastid protein [Medicago truncatula]
          Length = 235

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 46/106 (43%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
 Frame = -2

Query: 306 RAVASSFTRRIPTLLTMRHFST----TTTTNALHKPSPLLARRFLFPITQSVPISQSVLT 139
           RA+ASSF RR+ +  T    ST    TT   AL KPS L + RF+ P++Q+  I QS+  
Sbjct: 4   RAIASSFKRRLFSTTTSTSTSTSTYTTTVAGALSKPSSLTSPRFIIPMSQT--IFQSL-- 59

Query: 138 PAALFGGIRCQSNRSGDSAYSPLNXXXXXXXXXXXSDRPPTEMAPL 1
               FGGI    +R+G   YSPL            SDRPP EMAPL
Sbjct: 60  ---HFGGI----HRAGYCNYSPL----VPGSNTSFSDRPPAEMAPL 94


>gb|ACJ85878.1| unknown [Medicago truncatula]
          Length = 222

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 46/106 (43%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
 Frame = -2

Query: 306 RAVASSFTRRIPTLLTMRHFST----TTTTNALHKPSPLLARRFLFPITQSVPISQSVLT 139
           RA+ASSF RR+ +  T    ST    TT   AL KPS L + RF+ P++Q+  I QS+  
Sbjct: 4   RAIASSFKRRLFSTTTSTSTSTSTYTTTVAGALSKPSSLTSPRFIIPMSQT--IFQSL-- 59

Query: 138 PAALFGGIRCQSNRSGDSAYSPLNXXXXXXXXXXXSDRPPTEMAPL 1
               FGGI    +R+G   YSPL            SDRPP EMAPL
Sbjct: 60  ---HFGGI----HRAGYCNYSPL----VPGSNTSFSDRPPAEMAPL 94


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