BLASTX nr result

ID: Glycyrrhiza24_contig00014075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014075
         (1082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536934.1| PREDICTED: CDT1-like protein a, chloroplasti...   288   1e-75
ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplasti...   270   5e-70
emb|CBI37094.3| unnamed protein product [Vitis vinifera]              265   2e-68
ref|XP_002532371.1| conserved hypothetical protein [Ricinus comm...   262   9e-68
ref|XP_002307639.1| predicted protein [Populus trichocarpa] gi|2...   228   2e-57

>ref|XP_003536934.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Glycine max]
          Length = 596

 Score =  288 bits (738), Expect = 1e-75
 Identities = 170/300 (56%), Positives = 192/300 (64%)
 Frame = +2

Query: 29   SQKSKENGADNVQQKLPPDSFQPSALPVXXXXXXXXXXXXXXXXHPKRFPXXXXXXXXXX 208
            S  S    AD+VQ+    D  QP A PV                H K  P          
Sbjct: 309  SHMSPSFRADDVQKNPLLDLLQPLAFPVSESSRNENTPFVDTESHLKTSPAKLASEASSS 368

Query: 209  XICPTIHASQDCFTPSGATPATPSKTIEYTENKDGSLKSIDAMSTPAKLACTPSRLMSVT 388
              C TI A  +    S A PATPSKT EYTENKDGSLKSIDAMSTPAKL  TP RLMS T
Sbjct: 369  ESCLTICAPLES---SCAHPATPSKTTEYTENKDGSLKSIDAMSTPAKLVSTPIRLMSAT 425

Query: 389  PALPPPKRHYMSPDDNPTSSPNKLVRRPPRSRSLKFDTPVKNEDTGDSSIDDDVFDILPD 568
            PAL  PKRHYMSPDD+  SS NKL RRPPRSRSLKFDTPVKN+        DD+FD L +
Sbjct: 426  PALRSPKRHYMSPDDHSISSLNKLARRPPRSRSLKFDTPVKNK--------DDIFDTLQE 477

Query: 569  NLLQSIREKERIAMEERDPAISQAKKRQKIIASLPKLFNMLNLLFHSIKRSVITKEELIS 748
            + +QSIREKER+AME+RDPAI++AKKR+K IASLPKLF+M+  L    +R+ ITK EL+S
Sbjct: 478  STIQSIREKERLAMEKRDPAITEAKKRKKNIASLPKLFDMIRGLLR--QRNCITKAELVS 535

Query: 749  KIISSHCDIVDRSXXXXXXXXXXXXXXXWISEKLASSGDLLFCINKMSNPDTIRASLEEA 928
            KIISS CDI DRS               WISEK  SSGDLL  INKM +P+T+RASLEEA
Sbjct: 536  KIISSRCDIADRSEVEEQLNLLQELAPEWISEKQVSSGDLLLFINKMLSPETVRASLEEA 595


>ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Vitis vinifera]
          Length = 646

 Score =  270 bits (690), Expect = 5e-70
 Identities = 158/318 (49%), Positives = 198/318 (62%), Gaps = 8/318 (2%)
 Frame = +2

Query: 2    MSQAFRRRFSQKSKENGADNVQQKLPPDSFQPSALPVXXXXXXXXXXXXXXXXHPKRFPX 181
            +S+ F+RRFSQK     A+N  +K    S Q S LPV                     P 
Sbjct: 345  LSRCFQRRFSQKISGE-AENSNKKPANFSLQLSDLPVQDPYLNKSSSNEEVVATVAPSP- 402

Query: 182  XXXXXXXXXXICPTIHASQDCFTPSGATPATPSKTIEYTENKDG-SLKSIDAMSTPAKLA 358
                          + +S     P    PATP K  + T+N+D  S+K+ D   TPAKLA
Sbjct: 403  --------------VKSSSPAHLPLSHPPATPLKKTDSTDNQDFCSMKTPDIQVTPAKLA 448

Query: 359  CTPSRLMSVTPALPPPKRHYMSPDDNPTSSPNKLVRRPPRSRSLKFDTPVKN-------E 517
             +P+RLM++TP+L PPKR  MSP D+ T+SPNKLVRRP RSRSLKFDTPVK         
Sbjct: 449  FSPARLMTMTPSLQPPKRCLMSPHDDSTNSPNKLVRRPARSRSLKFDTPVKGAEIKEEVN 508

Query: 518  DTGDSSIDDDVFDILPDNLLQSIREKERIAMEERDPAISQAKKRQKIIASLPKLFNMLNL 697
            + G  S+D+D+ DILP+NLL+SIREKER A+EE+DPAISQAK+R+++I  LPKLFNM++ 
Sbjct: 509  EKGSLSVDNDILDILPENLLESIREKERKAIEEQDPAISQAKRRREMIVGLPKLFNMIHF 568

Query: 698  LFHSIKRSVITKEELISKIISSHCDIVDRSXXXXXXXXXXXXXXXWISEKLASSGDLLFC 877
            LF SI RSV+TKEEL+ KI++SHCDIVDR                WISEKLASSGDLL C
Sbjct: 569  LFQSINRSVVTKEELMHKILASHCDIVDRREVEEQLKLLQELVPEWISEKLASSGDLLLC 628

Query: 878  INKMSNPDTIRASLEEAK 931
            I K S+P++IR  L EAK
Sbjct: 629  IKKTSSPESIRQRLMEAK 646


>emb|CBI37094.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  265 bits (676), Expect = 2e-68
 Identities = 140/244 (57%), Positives = 175/244 (71%), Gaps = 8/244 (3%)
 Frame = +2

Query: 224  IHASQDCFTPSGATPATPSKTIEYTENKDG-SLKSIDAMSTPAKLACTPSRLMSVTPALP 400
            + +S     P    PATP K  + T+N+D  S+K+ D   TPAKLA +P+RLM++TP+L 
Sbjct: 375  VKSSSPAHLPLSHPPATPLKKTDSTDNQDFCSMKTPDIQVTPAKLAFSPARLMTMTPSLQ 434

Query: 401  PPKRHYMSPDDNPTSSPNKLVRRPPRSRSLKFDTPVKN-------EDTGDSSIDDDVFDI 559
            PPKR  MSP D+ T+SPNKLVRRP RSRSLKFDTPVK         + G  S+D+D+ DI
Sbjct: 435  PPKRCLMSPHDDSTNSPNKLVRRPARSRSLKFDTPVKGAEIKEEVNEKGSLSVDNDILDI 494

Query: 560  LPDNLLQSIREKERIAMEERDPAISQAKKRQKIIASLPKLFNMLNLLFHSIKRSVITKEE 739
            LP+NLL+SIREKER A+EE+DPAISQAK+R+++I  LPKLFNM++ LF SI RSV+TKEE
Sbjct: 495  LPENLLESIREKERKAIEEQDPAISQAKRRREMIVGLPKLFNMIHFLFQSINRSVVTKEE 554

Query: 740  LISKIISSHCDIVDRSXXXXXXXXXXXXXXXWISEKLASSGDLLFCINKMSNPDTIRASL 919
            L+ KI++SHCDIVDR                WISEKLASSGDLL CI K S+P++IR  L
Sbjct: 555  LMHKILASHCDIVDRREVEEQLKLLQELVPEWISEKLASSGDLLLCIKKTSSPESIRQRL 614

Query: 920  EEAK 931
             EAK
Sbjct: 615  MEAK 618


>ref|XP_002532371.1| conserved hypothetical protein [Ricinus communis]
            gi|223527927|gb|EEF30014.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 578

 Score =  262 bits (670), Expect = 9e-68
 Identities = 159/317 (50%), Positives = 193/317 (60%), Gaps = 8/317 (2%)
 Frame = +2

Query: 5    SQAFRRRFSQKSKENGADNVQQKLPPDSFQPSALPVXXXXXXXXXXXXXXXXHPKRFPXX 184
            S++F RRFSQK      +   Q  P    Q S   V                 P+ F   
Sbjct: 284  SKSFTRRFSQKLTNTEVEITCQGYPTVCSQQSVFSV-----------------PEPFLDI 326

Query: 185  XXXXXXXXXICPTIHASQDCFTPSGATPATPSKTIEYTENKDGSLKSIDAMSTPAKLACT 364
                       PT   S +C   S     TPSK I+ T +     K     STPAKLA T
Sbjct: 327  VSSNEETSSSAPT--DSNNC---SADVTRTPSKKIDSTSDGGSPTKVASFQSTPAKLALT 381

Query: 365  PSRLMSVTPALPPPKRHYMSPDDNPTSSPNKLVRRPPRSRSLKFDTPVKN------EDTG 526
            P++LMS TPAL PPKR YMSPDD+ TS  NKLVRRP R+RSLKF++P+KN      +D+G
Sbjct: 382  PAKLMSATPALHPPKRCYMSPDDDSTSLANKLVRRPVRTRSLKFESPLKNVEDELIDDSG 441

Query: 527  DSSIDDD--VFDILPDNLLQSIREKERIAMEERDPAISQAKKRQKIIASLPKLFNMLNLL 700
            D+S DDD  +  ILP++LLQSIREKER A EERDPAISQAK+R+++IA LPKLFN+++  
Sbjct: 442  DASGDDDGDILKILPESLLQSIREKERKAQEERDPAISQAKRRRQMIACLPKLFNLMHFF 501

Query: 701  FHSIKRSVITKEELISKIISSHCDIVDRSXXXXXXXXXXXXXXXWISEKLASSGDLLFCI 880
            F SI RSV+TKEEL+ KII+ H DIVDR                WIS+KLA+SGD LFCI
Sbjct: 502  FQSINRSVLTKEELMHKIIAGHSDIVDRREVEEQLDLLLELVPEWISKKLATSGDSLFCI 561

Query: 881  NKMSNPDTIRASLEEAK 931
            NKMS+P+TIRA LEEAK
Sbjct: 562  NKMSSPETIRARLEEAK 578


>ref|XP_002307639.1| predicted protein [Populus trichocarpa] gi|222857088|gb|EEE94635.1|
            predicted protein [Populus trichocarpa]
          Length = 564

 Score =  228 bits (581), Expect = 2e-57
 Identities = 147/317 (46%), Positives = 185/317 (58%), Gaps = 7/317 (2%)
 Frame = +2

Query: 2    MSQAFRRRFS-QKSKENGADNVQQKLPPDSFQPSALPVXXXXXXXXXXXXXXXXHPKRFP 178
            +S++F+RRFS QK  +  A+N  Q+    + +P    +                      
Sbjct: 273  LSRSFKRRFSSQKGTKIEAENSLQRSVSSALEPCPSKISSNERTSYSAPSPAK------- 325

Query: 179  XXXXXXXXXXXICPTIHASQDCFTPSGATPATPSKTIEYTENKDGS-LKSIDAMSTPAKL 355
                       +  T    QDC +      ATPSK  +   + D S  K     STPAKL
Sbjct: 326  -----------VSSTPTCDQDCLS------ATPSKVKDAINDGDDSPTKMASDQSTPAKL 368

Query: 356  ACTPSRLMSVTPALPPPKRHYMSPDDNPTSSPNKLVRRPPRSRSLKFDTPVKN-----ED 520
            A TP  L+S TPAL   KR     +D  ++SP+KLVRRPP SRSL F+TPVK+      +
Sbjct: 369  ALTPVALISTTPALHQHKRCTSPYNDGSSNSPDKLVRRPP-SRSLIFETPVKHAMDEQRE 427

Query: 521  TGDSSIDDDVFDILPDNLLQSIREKERIAMEERDPAISQAKKRQKIIASLPKLFNMLNLL 700
            TGD S DDDV  I P++LLQSIREKE+ A EERDPAISQAKKR+++IA LPKLFN ++ L
Sbjct: 428  TGDVSDDDDVLKIFPESLLQSIREKEQKAKEERDPAISQAKKRRQMIACLPKLFNKIHFL 487

Query: 701  FHSIKRSVITKEELISKIISSHCDIVDRSXXXXXXXXXXXXXXXWISEKLASSGDLLFCI 880
            F SI++SV+TKEELI KII+SH DI DR                WISEKLASSGD +F I
Sbjct: 488  FQSIRQSVLTKEELIHKIIASHSDIADRREVDEQLNLLLELVPEWISEKLASSGDSIFRI 547

Query: 881  NKMSNPDTIRASLEEAK 931
            NKM +P+T+RA LEEAK
Sbjct: 548  NKMYSPETVRARLEEAK 564


Top