BLASTX nr result

ID: Glycyrrhiza24_contig00014060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014060
         (1391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533804.1| PREDICTED: putative uncharacterized protein ...   389   e-106
ref|XP_003547526.1| PREDICTED: uncharacterized protein LOC100803...   373   e-101
emb|CBI27748.3| unnamed protein product [Vitis vinifera]              338   3e-90
ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   336   1e-89
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   315   2e-83

>ref|XP_003533804.1| PREDICTED: putative uncharacterized protein At4g01020,
            chloroplastic-like [Glycine max]
          Length = 333

 Score =  389 bits (1000), Expect = e-106
 Identities = 194/316 (61%), Positives = 223/316 (70%), Gaps = 11/316 (3%)
 Frame = -1

Query: 1223 LETRRRVVPPSTPEVIDVESFNFTP-------NRSTAINLDHYDAVSKP--HPL-VIDLS 1074
            L TR R+ P       DV+S  FT         +S AI+++ YD VS     P+ VI+LS
Sbjct: 34   LRTRTRIPP------FDVDSSFFTTPISLQGTTKSNAISVEQYDGVSASASSPVHVINLS 87

Query: 1073 DNEDDDDVRILNFIPQNTPFGKXXXXXXXXXRFEKGESSSSPSNGTPFVCEICTETKTAR 894
            D EDDD+VRILNF P NT FGK           +K  S    SN   FVCEICTETKTAR
Sbjct: 88   DTEDDDEVRILNFTPINTSFGKRS---------KKSSSKGECSNSASFVCEICTETKTAR 138

Query: 893  DAFTISGCSHAYCSDCVAMYVASKVEENVINIRCPASGCTAGLLEAEDCRSILPAAVFDR 714
            D+F+I GC H YC+ CVA YV SK+EEN+++I CP  GC  GLLEA+DCR IL   VFDR
Sbjct: 139  DSFSIIGCHHVYCNSCVAQYVESKLEENIVSIPCPVPGCR-GLLEADDCREILAPRVFDR 197

Query: 713  WGKASCEAAIAASEKFYCPFGDCSALLIDDGTEA-VRESECPNCRRIFCAQCRVPWHDGI 537
            WGKA CEA IAA EKFYCPF DCS +LI    E  +RE+ECPNCRR+FCAQCRVPWHD +
Sbjct: 198  WGKALCEAVIAAEEKFYCPFADCSVMLIRGIEENNIREAECPNCRRLFCAQCRVPWHDNM 257

Query: 536  ECAEFQKLNADERQKEDVMLMKLAKDMKWKRCPNCRFYVAKSEGCMYMKCRCGLAFCYNC 357
             C +FQKLNADER KED+MLM LA  M+WKRCP CRFYVAKS+GCMYMKCRCG AFCYNC
Sbjct: 258  PCEDFQKLNADERDKEDIMLMNLANQMQWKRCPRCRFYVAKSDGCMYMKCRCGNAFCYNC 317

Query: 356  GAPNSSNSHYCSNCRR 309
            GAPN ++SH CS C R
Sbjct: 318  GAPNLTSSHSCSYCFR 333


>ref|XP_003547526.1| PREDICTED: uncharacterized protein LOC100803898 [Glycine max]
          Length = 685

 Score =  373 bits (958), Expect = e-101
 Identities = 185/306 (60%), Positives = 219/306 (71%), Gaps = 13/306 (4%)
 Frame = -1

Query: 1226 SLETRRRVVPPSTP--EVIDVESFNFTP-------NRSTAINLDHYDAVSKP--HPL-VI 1083
            SL  R R+  P  P  +V+DV+S  FT         +S AI ++ YDAVS    +P+ VI
Sbjct: 25   SLRKRNRIRTPVPPFADVVDVDSSFFTTPISFRGTTKSNAIAVEQYDAVSASVSNPVHVI 84

Query: 1082 DLSDNEDDDDVRILNFIPQNTPFGKXXXXXXXXXRFEKGESSSSPSNGTPFVCEICTETK 903
            +LSD EDDDDVRILNF P NT FGK           +K  S    S+  PF+CEICTETK
Sbjct: 85   NLSDTEDDDDVRILNFTPPNTSFGKRR---------KKSSSKGECSSTAPFLCEICTETK 135

Query: 902  TARDAFTISGCSHAYCSDCVAMYVASKVEENVINIRCPASGCTAGLLEAEDCRSILPAAV 723
            T RD+F+I+GC H YC+ CVA YV SK+E+NV+NI CP  GC  GLLEA+ CR IL   V
Sbjct: 136  TDRDSFSITGCRHVYCNSCVAQYVESKLEDNVVNIPCPVPGCR-GLLEADYCREILSPRV 194

Query: 722  FDRWGKASCEAAIAASEKFYCPFGDCSALLIDDGTEA-VRESECPNCRRIFCAQCRVPWH 546
            FDRWG A CEA I A EKFYCPF DCSA+LI    +A +RE ECPNCRR+FCA CRVPWH
Sbjct: 195  FDRWGNALCEAVIDAEEKFYCPFADCSAMLIRASEDADIRECECPNCRRLFCALCRVPWH 254

Query: 545  DGIECAEFQKLNADERQKEDVMLMKLAKDMKWKRCPNCRFYVAKSEGCMYMKCRCGLAFC 366
            + I C EFQKLNA+ER++ED+MLM LAK M+WKRCP+CRFYVAKSEGCMYM+CRCG +FC
Sbjct: 255  ENIPCEEFQKLNAEEREREDIMLMSLAKQMQWKRCPHCRFYVAKSEGCMYMRCRCGNSFC 314

Query: 365  YNCGAP 348
            Y CGAP
Sbjct: 315  YKCGAP 320



 Score = 97.4 bits (241), Expect = 8e-18
 Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
 Frame = -1

Query: 698 CEAAIAASEKFYCPFGDCSALLIDDGTEA-VRESECPNCRRIFCAQCRVPWHDGIECAEF 522
           C++ I   +KFYCPF DCSAL + D  +  + +SECP CRR+FCAQC+ PW+ GI   EF
Sbjct: 606 CKSLIPEKDKFYCPFKDCSALFVRDTEDNDITQSECPICRRLFCAQCKAPWNQGIRYKEF 665

Query: 521 QKLNADERQKEDVMLMKL 468
           QKL  +E++++D+MLM L
Sbjct: 666 QKLKKNEKERQDIMLMIL 683


>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  338 bits (866), Expect = 3e-90
 Identities = 157/294 (53%), Positives = 197/294 (67%), Gaps = 16/294 (5%)
 Frame = -1

Query: 1145 RSTAINLDHYDA-----------VSKPHPLVIDLSDNEDDDDVRILNFIPQNTPFGKXXX 999
            R+TAI+++ Y A           + +P   +I L +++DDDD++IL   P  TP      
Sbjct: 39   RNTAISVEQYSADKELYLSIKASLLQPQTPLIHLDNDDDDDDLQILGINPPTTPHA---F 95

Query: 998  XXXXXXRFEKGESSSSPSNGTP-----FVCEICTETKTARDAFTISGCSHAYCSDCVAMY 834
                   F     +  PSN  P     FVCEIC + K    +F+I GC H+YCSDC+  Y
Sbjct: 96   STRKPFTFPSVTETGQPSNSKPDPPPTFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKY 155

Query: 833  VASKVEENVINIRCPASGCTAGLLEAEDCRSILPAAVFDRWGKASCEAAIAASEKFYCPF 654
            VASK+++NV  I CPA  CT G+LE + CR ILP+ VFDRWG A CEA I  S+KFYCP+
Sbjct: 156  VASKLQDNVSRISCPAPNCT-GVLEPQQCRPILPSHVFDRWGNALCEALILGSQKFYCPY 214

Query: 653  GDCSALLIDDGTEAVRESECPNCRRIFCAQCRVPWHDGIECAEFQKLNADERQKEDVMLM 474
             DCSALLI D  E ++ESECPNCRR+FCAQC VPWH GI+C EFQKLN DER +ED+++M
Sbjct: 215  KDCSALLIRDEGEVIKESECPNCRRLFCAQCEVPWHSGIDCGEFQKLNKDERGREDILMM 274

Query: 473  KLAKDMKWKRCPNCRFYVAKSEGCMYMKCRCGLAFCYNCGAPNSSNSHYCSNCR 312
             LAK   WKRCP C+FYV KS GCMY++CRCG AFCYNCGAP+S+ SH C +CR
Sbjct: 275  NLAKTNNWKRCPKCKFYVEKSFGCMYIRCRCGFAFCYNCGAPSSTISHICPHCR 328


>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like [Vitis
            vinifera]
          Length = 358

 Score =  336 bits (861), Expect = 1e-89
 Identities = 156/293 (53%), Positives = 196/293 (66%), Gaps = 16/293 (5%)
 Frame = -1

Query: 1145 RSTAINLDHYDA-----------VSKPHPLVIDLSDNEDDDDVRILNFIPQNTPFGKXXX 999
            R+TAI+++ Y A           + +P   +I L +++DDDD++IL   P  TP      
Sbjct: 39   RNTAISVEQYSADKELYLSIKASLLQPQTPLIHLDNDDDDDDLQILGINPPTTPHA---F 95

Query: 998  XXXXXXRFEKGESSSSPSNGTP-----FVCEICTETKTARDAFTISGCSHAYCSDCVAMY 834
                   F     +  PSN  P     FVCEIC + K    +F+I GC H+YCSDC+  Y
Sbjct: 96   STRKPFTFPSVTETGQPSNSKPDPPPTFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKY 155

Query: 833  VASKVEENVINIRCPASGCTAGLLEAEDCRSILPAAVFDRWGKASCEAAIAASEKFYCPF 654
            VASK+++NV  I CPA  CT G+LE + CR ILP+ VFDRWG A CEA I  S+KFYCP+
Sbjct: 156  VASKLQDNVSRISCPAPNCT-GVLEPQQCRPILPSHVFDRWGNALCEALILGSQKFYCPY 214

Query: 653  GDCSALLIDDGTEAVRESECPNCRRIFCAQCRVPWHDGIECAEFQKLNADERQKEDVMLM 474
             DCSALLI D  E ++ESECPNCRR+FCAQC VPWH GI+C EFQKLN DER +ED+++M
Sbjct: 215  KDCSALLIRDEGEVIKESECPNCRRLFCAQCEVPWHSGIDCGEFQKLNKDERGREDILMM 274

Query: 473  KLAKDMKWKRCPNCRFYVAKSEGCMYMKCRCGLAFCYNCGAPNSSNSHYCSNC 315
             LAK   WKRCP C+FYV KS GCMY++CRCG AFCYNCGAP+S+ SH C +C
Sbjct: 275  NLAKTNNWKRCPKCKFYVEKSFGCMYIRCRCGFAFCYNCGAPSSTISHICPHC 327


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
            predicted protein [Populus trichocarpa]
          Length = 307

 Score =  315 bits (807), Expect = 2e-83
 Identities = 137/254 (53%), Positives = 182/254 (71%), Gaps = 1/254 (0%)
 Frame = -1

Query: 1070 NEDDDDVRILNFIPQNTPFGKXXXXXXXXXRFEKGESSSSPSNGTPFVCEICTETKTARD 891
            N++DDD+++L+F+P+  P  K           EKG+SS+S  +   FVC+IC E    ++
Sbjct: 53   NDEDDDIKVLDFLPEVIPSRKQKEPTFIESVAEKGQSSNSQID-PDFVCQICVEPTILKN 111

Query: 890  AFTISGCSHAYCSDCVAMYVASKVEENVINIRCPASGCTAGLLEAEDCRSILPAAVFDRW 711
            +F I GC+HAYC++C+  YV+SK++EN+  I CP   C  G LE EDCRS+LP  VFDRW
Sbjct: 112  SFLIKGCTHAYCTECMVKYVSSKLQENITKICCPVPDCK-GALEPEDCRSVLPENVFDRW 170

Query: 710  GKASCEAAIAASEKFYCPFGDCSALLIDDGTEAVRESECPNCRRIFCAQCRVPWHDGIEC 531
            G A CEA I  S+KFYCPF DCSA+LIDDG E VRESECPNC R+FCAQC+VPWH  I C
Sbjct: 171  GNALCEAVILGSQKFYCPFKDCSAMLIDDGEEVVRESECPNCWRMFCAQCKVPWHSQISC 230

Query: 530  AEFQKLNADERQKEDVMLMKLAKDMKWKRCPNCRFYVAKSEGCMYMKCRCGLAFCYNCGA 351
             E++ L+ DER+++D++LM LAK+  W+RCP CR +V K EGC YMKCRCG  FCY+CG+
Sbjct: 231  EEYKMLHKDERERDDILLMNLAKNKNWRRCPKCRIFVEKIEGCRYMKCRCGTQFCYSCGS 290

Query: 350  PN-SSNSHYCSNCR 312
             + +  +HYC  C+
Sbjct: 291  TDLNPVTHYCYKCK 304


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