BLASTX nr result

ID: Glycyrrhiza24_contig00014028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014028
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   281   1e-73
ref|XP_003638252.1| ATP-dependent RNA helicase A-like protein, p...   271   8e-71
emb|CBI18267.3| unnamed protein product [Vitis vinifera]              251   1e-64
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...   251   1e-64
ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinu...   249   3e-64

>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1161

 Score =  281 bits (719), Expect = 1e-73
 Identities = 135/140 (96%), Positives = 137/140 (97%)
 Frame = -1

Query: 740  EDPSIDIHKEGKYLMFAVQELVSGDQCEGRFVFGRESRKPKASNDENKFTKDGTNPKSLL 561
            EDPSIDIHKEGKYLM AVQELVSGDQCEGRFVFGRESRKPKASNDENKFTKDGTNPKSLL
Sbjct: 1007 EDPSIDIHKEGKYLMLAVQELVSGDQCEGRFVFGRESRKPKASNDENKFTKDGTNPKSLL 1066

Query: 560  QTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTH 381
            QTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTH
Sbjct: 1067 QTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTH 1126

Query: 380  TSDNTEHQDDNSPPDVTDNM 321
            TSDN +H+DD SPPDVTDNM
Sbjct: 1127 TSDNNQHEDDKSPPDVTDNM 1146


>ref|XP_003638252.1| ATP-dependent RNA helicase A-like protein, partial [Medicago
           truncatula] gi|355504187|gb|AES85390.1| ATP-dependent
           RNA helicase A-like protein, partial [Medicago
           truncatula]
          Length = 333

 Score =  271 bits (694), Expect = 8e-71
 Identities = 131/140 (93%), Positives = 134/140 (95%)
 Frame = -1

Query: 740 EDPSIDIHKEGKYLMFAVQELVSGDQCEGRFVFGRESRKPKASNDENKFTKDGTNPKSLL 561
           EDP IDIHKEGKYLM AVQELVSGDQCEGRFVFGR+SRKPKASNDENKFTKDGTNPKSLL
Sbjct: 178 EDPGIDIHKEGKYLMLAVQELVSGDQCEGRFVFGRDSRKPKASNDENKFTKDGTNPKSLL 237

Query: 560 QTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTH 381
           QTLLMRAGHS PKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTH
Sbjct: 238 QTLLMRAGHSAPKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTH 297

Query: 380 TSDNTEHQDDNSPPDVTDNM 321
           TSDN + +DD SPPDVTDNM
Sbjct: 298 TSDNAQPEDDKSPPDVTDNM 317


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  251 bits (640), Expect = 1e-64
 Identities = 120/142 (84%), Positives = 132/142 (92%), Gaps = 2/142 (1%)
 Frame = -1

Query: 740  EDPSIDIHKEGKYLMFAVQELVSGDQCEGRFVFGRESRKPKASNDENKFTKDGTNPKSLL 561
            ++PS+DIHKEGKYLM  +QELVSGDQCEGRFVFGRES+KP+   D N+FTKDGTNPKSLL
Sbjct: 982  QNPSLDIHKEGKYLMLGIQELVSGDQCEGRFVFGRESKKPREPCDSNRFTKDGTNPKSLL 1041

Query: 560  QTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTH 381
            QTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPK+NKQLAERDAAIEALAWLTH
Sbjct: 1042 QTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKKNKQLAERDAAIEALAWLTH 1101

Query: 380  TSDNT--EHQDDNSPPDVTDNM 321
            TSDN+  E+ +D SPPDVT+NM
Sbjct: 1102 TSDNSQGEYGEDESPPDVTNNM 1123


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis vinifera]
          Length = 1136

 Score =  251 bits (640), Expect = 1e-64
 Identities = 120/142 (84%), Positives = 132/142 (92%), Gaps = 2/142 (1%)
 Frame = -1

Query: 740  EDPSIDIHKEGKYLMFAVQELVSGDQCEGRFVFGRESRKPKASNDENKFTKDGTNPKSLL 561
            ++PS+DIHKEGKYLM  +QELVSGDQCEGRFVFGRES+KP+   D N+FTKDGTNPKSLL
Sbjct: 982  QNPSLDIHKEGKYLMLGIQELVSGDQCEGRFVFGRESKKPREPCDSNRFTKDGTNPKSLL 1041

Query: 560  QTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTH 381
            QTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPK+NKQLAERDAAIEALAWLTH
Sbjct: 1042 QTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKKNKQLAERDAAIEALAWLTH 1101

Query: 380  TSDNT--EHQDDNSPPDVTDNM 321
            TSDN+  E+ +D SPPDVT+NM
Sbjct: 1102 TSDNSQGEYGEDESPPDVTNNM 1123


>ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1129

 Score =  249 bits (637), Expect = 3e-64
 Identities = 119/140 (85%), Positives = 134/140 (95%)
 Frame = -1

Query: 740  EDPSIDIHKEGKYLMFAVQELVSGDQCEGRFVFGRESRKPKASNDENKFTKDGTNPKSLL 561
            +DP++DIHKEGKYL+ AVQELVSGDQCEGRFVFGRES+KPK S+ E++FTKDGTNPKSLL
Sbjct: 976  QDPTLDIHKEGKYLLLAVQELVSGDQCEGRFVFGRESKKPKESS-ESRFTKDGTNPKSLL 1034

Query: 560  QTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTH 381
            QTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPK+NKQLAERDAAIEALAWLTH
Sbjct: 1035 QTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKKNKQLAERDAAIEALAWLTH 1094

Query: 380  TSDNTEHQDDNSPPDVTDNM 321
            TSD+++ +++ S PDVTDNM
Sbjct: 1095 TSDSSQEENEKSQPDVTDNM 1114


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