BLASTX nr result

ID: Glycyrrhiza24_contig00014012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014012
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like ...   350   3e-94
ref|XP_003535773.1| PREDICTED: putative SWI/SNF-related matrix-a...   309   6e-82
ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...   287   2e-75
ref|XP_004172034.1| PREDICTED: DNA repair protein rad5-like, par...   283   4e-74
ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent hel...   283   4e-74

>ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like [Glycine max]
          Length = 1027

 Score =  350 bits (897), Expect = 3e-94
 Identities = 171/187 (91%), Positives = 183/187 (97%)
 Frame = -3

Query: 876  PSSDNSYIENCDSDVRVTKHTRKYSESTTEGPMKAIIFSQWTSMLDLVETSLEQSGIPYR 697
            PS DN ++E+CDSDVRVTKHTR+YSESTTEGP+KAI+FSQWTSMLDLVETSL+Q GI YR
Sbjct: 841  PSLDNLHVEDCDSDVRVTKHTRRYSESTTEGPIKAIVFSQWTSMLDLVETSLKQFGIQYR 900

Query: 696  RLDGRMTLGARDKAVKDFNTDPEITVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQ 517
            RLDGRMTLGARDKAVKDFNT+PEITVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQ
Sbjct: 901  RLDGRMTLGARDKAVKDFNTEPEITVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQ 960

Query: 516  AIDRAHRIGQTRPVTVTRITIKDTVEDRILSLQEEKRKMVASAFGEDHAGSSGTRLTVDD 337
            AIDRAHRIGQTRPVTVTRITIKDTVEDRIL+LQ++KRKMVASAFGEDHAG+SGTRLTVDD
Sbjct: 961  AIDRAHRIGQTRPVTVTRITIKDTVEDRILALQDDKRKMVASAFGEDHAGASGTRLTVDD 1020

Query: 336  LKYLFMV 316
            LKYLFMV
Sbjct: 1021 LKYLFMV 1027


>ref|XP_003535773.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Glycine max]
          Length = 975

 Score =  309 bits (791), Expect = 6e-82
 Identities = 158/187 (84%), Positives = 164/187 (87%)
 Frame = -3

Query: 876  PSSDNSYIENCDSDVRVTKHTRKYSESTTEGPMKAIIFSQWTSMLDLVETSLEQSGIPYR 697
            PSSDN Y                YSESTTEGP+KAI+FSQWTSMLDLVETSL Q  I YR
Sbjct: 805  PSSDNLY----------------YSESTTEGPIKAIVFSQWTSMLDLVETSLRQFSIQYR 848

Query: 696  RLDGRMTLGARDKAVKDFNTDPEITVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQ 517
            RLDGRMTLGARDKAVKDFNT+PEI VMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQ
Sbjct: 849  RLDGRMTLGARDKAVKDFNTEPEIAVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQ 908

Query: 516  AIDRAHRIGQTRPVTVTRITIKDTVEDRILSLQEEKRKMVASAFGEDHAGSSGTRLTVDD 337
            AIDRAHRIGQTRPVTVTRITIKDTVEDRIL+LQE+KRKMVASAFGEDHAG +GTRLTVDD
Sbjct: 909  AIDRAHRIGQTRPVTVTRITIKDTVEDRILALQEDKRKMVASAFGEDHAGGTGTRLTVDD 968

Query: 336  LKYLFMV 316
            LKYLFMV
Sbjct: 969  LKYLFMV 975


>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222853265|gb|EEE90812.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 923

 Score =  287 bits (735), Expect = 2e-75
 Identities = 142/164 (86%), Positives = 152/164 (92%)
 Frame = -3

Query: 807  YSESTTEGPMKAIIFSQWTSMLDLVETSLEQSGIPYRRLDGRMTLGARDKAVKDFNTDPE 628
            YS  +TEGP+KAI+FSQWTSMLDLVE SL Q  I YRRLDG MTL +RDKAVKDFNTDPE
Sbjct: 760  YSRLSTEGPIKAIVFSQWTSMLDLVEFSLNQHCIQYRRLDGTMTLSSRDKAVKDFNTDPE 819

Query: 627  ITVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKD 448
            +TVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTR+TIKD
Sbjct: 820  VTVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRLTIKD 879

Query: 447  TVEDRILSLQEEKRKMVASAFGEDHAGSSGTRLTVDDLKYLFMV 316
            TVEDRIL+LQ+EKRKMVASAFGED +G S TRLTV+DLKYLFMV
Sbjct: 880  TVEDRILALQDEKRKMVASAFGEDQSGGSATRLTVEDLKYLFMV 923


>ref|XP_004172034.1| PREDICTED: DNA repair protein rad5-like, partial [Cucumis sativus]
          Length = 379

 Score =  283 bits (724), Expect = 4e-74
 Identities = 142/185 (76%), Positives = 161/185 (87%)
 Frame = -3

Query: 870 SDNSYIENCDSDVRVTKHTRKYSESTTEGPMKAIIFSQWTSMLDLVETSLEQSGIPYRRL 691
           S++  IE CDSDV  TKH        TE P+K I+FSQWTSMLDLVE SL ++ I YRRL
Sbjct: 197 SEDECIEICDSDVNNTKHASPCPP--TEEPVKTIVFSQWTSMLDLVELSLNEACIQYRRL 254

Query: 690 DGRMTLGARDKAVKDFNTDPEITVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAI 511
           DG M+L +RD+AVKDFN+DPEI+VMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQA+
Sbjct: 255 DGTMSLVSRDRAVKDFNSDPEISVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAV 314

Query: 510 DRAHRIGQTRPVTVTRITIKDTVEDRILSLQEEKRKMVASAFGEDHAGSSGTRLTVDDLK 331
           DRAHRIGQTRPVTV+RIT+KDTVEDRIL+LQEEKRKMVASAFGED +G S +RLTV+DL+
Sbjct: 315 DRAHRIGQTRPVTVSRITVKDTVEDRILALQEEKRKMVASAFGEDQSGGSASRLTVEDLR 374

Query: 330 YLFMV 316
           YLFMV
Sbjct: 375 YLFMV 379


>ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            [Cucumis sativus]
          Length = 1015

 Score =  283 bits (724), Expect = 4e-74
 Identities = 142/185 (76%), Positives = 161/185 (87%)
 Frame = -3

Query: 870  SDNSYIENCDSDVRVTKHTRKYSESTTEGPMKAIIFSQWTSMLDLVETSLEQSGIPYRRL 691
            S++  IE CDSDV  TKH        TE P+K I+FSQWTSMLDLVE SL ++ I YRRL
Sbjct: 833  SEDECIEICDSDVNNTKHASPCPP--TEEPVKTIVFSQWTSMLDLVELSLNEACIQYRRL 890

Query: 690  DGRMTLGARDKAVKDFNTDPEITVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAI 511
            DG M+L +RD+AVKDFN+DPEI+VMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQA+
Sbjct: 891  DGTMSLVSRDRAVKDFNSDPEISVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAV 950

Query: 510  DRAHRIGQTRPVTVTRITIKDTVEDRILSLQEEKRKMVASAFGEDHAGSSGTRLTVDDLK 331
            DRAHRIGQTRPVTV+RIT+KDTVEDRIL+LQEEKRKMVASAFGED +G S +RLTV+DL+
Sbjct: 951  DRAHRIGQTRPVTVSRITVKDTVEDRILALQEEKRKMVASAFGEDQSGGSASRLTVEDLR 1010

Query: 330  YLFMV 316
            YLFMV
Sbjct: 1011 YLFMV 1015


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