BLASTX nr result

ID: Glycyrrhiza24_contig00014003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00014003
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520603.1| PREDICTED: U-box domain-containing protein 3...   232   5e-59
ref|XP_003554287.1| PREDICTED: U-box domain-containing protein 3...   225   9e-57
ref|XP_002302042.1| predicted protein [Populus trichocarpa] gi|2...   129   5e-28
ref|XP_002277883.1| PREDICTED: U-box domain-containing protein 3...   127   3e-27
ref|XP_002532036.1| ubiquitin-protein ligase, putative [Ricinus ...   124   2e-26

>ref|XP_003520603.1| PREDICTED: U-box domain-containing protein 3-like [Glycine max]
          Length = 759

 Score =  232 bits (592), Expect = 5e-59
 Identities = 135/248 (54%), Positives = 156/248 (62%)
 Frame = -2

Query: 745 GQTYERQSIQMWLDHGLTVCPKTHQRLTHTNLIPNYTVKAMIANWCEENNVKLPSNSKHS 566
           GQTYERQSIQ WLDHGLTVCP T Q L HTNLIPNYTVKAMIANWCEENNVKLPSNSK S
Sbjct: 260 GQTYERQSIQKWLDHGLTVCPNTRQILVHTNLIPNYTVKAMIANWCEENNVKLPSNSKQS 319

Query: 565 DSANISSPSDDSLHQELDCVCXXXXXXXXXXXXXXSLQTGNAFEKQKGDNSFGLSGESNR 386
           +S++ISSPSD  LHQ+LD +C                Q  NAFEK K DNSF  S ES+R
Sbjct: 320 NSSHISSPSDHLLHQDLDRLCSFESSASSDSNSN---QIANAFEKPKDDNSFRSSRESDR 376

Query: 385 CQSGDTEKFEQQSLAPXXXXXXXXXXXXXXXXSDYVLPVSKEMSGISNNKHQSVLSGGIT 206
             +G+TEKFEQQS AP                +DYV PV KE+SGIS NKHQ+V      
Sbjct: 377 SWNGETEKFEQQSPAPSCSNSRSESFSSSISSTDYVFPVLKEVSGIS-NKHQNV------ 429

Query: 205 NGCPASPAHKESEIFPSLSREQFESPGSKIGRMENENKYSKNNSITITSPSRVDTLPVSN 26
                                    PGSKIGRME+ENKY+++N+I+ITS S+V + PV  
Sbjct: 430 ------------------------DPGSKIGRMEDENKYNESNNISITSHSKVASHPV-- 463

Query: 25  SGSDKLTT 2
            GS++L T
Sbjct: 464 -GSNELIT 470


>ref|XP_003554287.1| PREDICTED: U-box domain-containing protein 3-like [Glycine max]
          Length = 775

 Score =  225 bits (573), Expect = 9e-57
 Identities = 132/248 (53%), Positives = 144/248 (58%)
 Frame = -2

Query: 745 GQTYERQSIQMWLDHGLTVCPKTHQRLTHTNLIPNYTVKAMIANWCEENNVKLPSNSKHS 566
           GQTYERQSIQ WLDHGLTVCP TH RL HTNLIPNYTVKAMIANWCEENNVKLP NSK S
Sbjct: 280 GQTYERQSIQKWLDHGLTVCPNTHHRLVHTNLIPNYTVKAMIANWCEENNVKLPCNSKQS 339

Query: 565 DSANISSPSDDSLHQELDCVCXXXXXXXXXXXXXXSLQTGNAFEKQKGDNSFGLSGESNR 386
           +S  ISSPSD  LHQ+LD  C                QT NAFEKQK DNSFG    S+R
Sbjct: 340 NSTRISSPSDHLLHQDLDRQCSFQSSDSSNSYSN---QTANAFEKQKDDNSFGSGRGSHR 396

Query: 385 CQSGDTEKFEQQSLAPXXXXXXXXXXXXXXXXSDYVLPVSKEMSGISNNKHQSVLSGGIT 206
            ++G TEKFEQQS AP                +DYVLPVSKE+S ISN  H   L     
Sbjct: 397 SRNGQTEKFEQQSPAPSCSNRRSESFSSSISSTDYVLPVSKEVSVISNKHHNVEL----- 451

Query: 205 NGCPASPAHKESEIFPSLSREQFESPGSKIGRMENENKYSKNNSITITSPSRVDTLPVSN 26
                                           ME+ENKY  NN+I ITS S+V + PVSN
Sbjct: 452 --------------------------------MEDENKYESNNNI-ITSHSKVASHPVSN 478

Query: 25  SGSDKLTT 2
            GSD+L T
Sbjct: 479 LGSDELIT 486


>ref|XP_002302042.1| predicted protein [Populus trichocarpa] gi|222843768|gb|EEE81315.1|
           predicted protein [Populus trichocarpa]
          Length = 753

 Score =  129 bits (325), Expect = 5e-28
 Identities = 84/177 (47%), Positives = 96/177 (54%), Gaps = 3/177 (1%)
 Frame = -2

Query: 745 GQTYERQSIQMWLDHGLTVCPKTHQRLTHTNLIPNYTVKAMIANWCEENNVKLPSNSKHS 566
           GQTY+R SIQ WLDHGLT CP+T Q L+HTNLIPNYTVKAMIANWCEENNV++   S HS
Sbjct: 258 GQTYDRVSIQKWLDHGLTFCPRTRQTLSHTNLIPNYTVKAMIANWCEENNVRV---SSHS 314

Query: 565 DSAN--ISSPSDDSLHQELDCVCXXXXXXXXXXXXXXSLQTGNAFEKQKGDNSFGLSGES 392
           D  N  ++S   D LH  LD                 S++ GN FEKQ    S  LSGE 
Sbjct: 315 DCNNHVLASSHHDLLH--LDSFRNRCSLHRSNSTSRSSVEVGNGFEKQVIGVSSRLSGEE 372

Query: 391 -NRCQSGDTEKFEQQSLAPXXXXXXXXXXXXXXXXSDYVLPVSKEMSGISNNKHQSV 224
            NR     TE FE  S                    +YV PVS EM  +S  KH +V
Sbjct: 373 FNRYNVTGTESFEHPSQGHSYIHSRSESTSSAISSIEYVPPVSDEMLKLS-TKHDNV 428


>ref|XP_002277883.1| PREDICTED: U-box domain-containing protein 3-like isoform 1 [Vitis
           vinifera]
          Length = 764

 Score =  127 bits (318), Expect = 3e-27
 Identities = 78/184 (42%), Positives = 94/184 (51%), Gaps = 3/184 (1%)
 Frame = -2

Query: 745 GQTYERQSIQMWLDHGLTVCPKTHQRLTHTNLIPNYTVKAMIANWCEENNVKLPSNSKHS 566
           GQTYER SIQ WLD GL +CPKT Q L H NLIPNYTVKA+I NWCEENN+ L   S+H+
Sbjct: 258 GQTYERSSIQKWLDQGLMICPKTRQTLAHANLIPNYTVKALIENWCEENNITLSGTSEHT 317

Query: 565 DSANISSPSDD-SLHQELDCVCXXXXXXXXXXXXXXSLQTGNAFEKQKGDNSFGLSG-ES 392
           +   + SP D  S    +                  SL+ GN  EK K D S    G ES
Sbjct: 318 NITPVPSPLDHVSAQDVIGMDSFRCSIHSSNCTSRSSLEVGNGIEKLKVDVSTRFGGEES 377

Query: 391 NRCQSGDTEKFEQQSLAPXXXXXXXXXXXXXXXXSDYVLPVSKEMSGISNNKHQSV-LSG 215
           N C+S + EK E+QS                    D +   S E+S ISN +     LSG
Sbjct: 378 NVCKSREPEKLERQSPEQSYIHSRTESTSSAVSSIDSLPTASTELSRISNKQENGTGLSG 437

Query: 214 GITN 203
            IT+
Sbjct: 438 EITS 441


>ref|XP_002532036.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223528306|gb|EEF30352.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 753

 Score =  124 bits (312), Expect = 2e-26
 Identities = 83/206 (40%), Positives = 106/206 (51%), Gaps = 6/206 (2%)
 Frame = -2

Query: 745 GQTYERQSIQMWLDHGLTVCPKTHQRLTHTNLIPNYTVKAMIANWCEENNVKLPSNSKHS 566
           GQTYER SIQ WL+HGLT+CPKT + L H+NLIPNYTVKAMI+NWCEEN+++  SNSK  
Sbjct: 258 GQTYERASIQKWLEHGLTICPKTRKTLAHSNLIPNYTVKAMISNWCEENHIRPSSNSKQD 317

Query: 565 DSANISSPSD-----DSLHQELDCVCXXXXXXXXXXXXXXSLQTGNAFEKQKGDNSFGLS 401
           D  + S P+D     DSLH  L                  SL+ GN FEKQ+      LS
Sbjct: 318 DLISASVPADALQCSDSLHYSL---------HNSNSISKSSLEGGNGFEKQRVVFLSKLS 368

Query: 400 GES-NRCQSGDTEKFEQQSLAPXXXXXXXXXXXXXXXXSDYVLPVSKEMSGISNNKHQSV 224
            E  N  Q    E FE+ S                    +YV P++ E+S +S  KH+ V
Sbjct: 369 REEPNGYQVQKIESFERPSHELSYNHSRSESTSSAISSIEYVPPIANEVSMVS-RKHEKV 427

Query: 223 LSGGITNGCPASPAHKESEIFPSLSR 146
                ++  P + A  E      L+R
Sbjct: 428 -----SDSIPKTKADGEGNANHKLNR 448


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