BLASTX nr result

ID: Glycyrrhiza24_contig00013993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013993
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629917.1| hypothetical protein MTR_8g088330 [Medicago ...    67   7e-22
ref|XP_002523189.1| conserved hypothetical protein [Ricinus comm...    56   2e-12
ref|XP_002298888.1| predicted protein [Populus trichocarpa] gi|1...    49   5e-10
gb|ABK96040.1| unknown [Populus trichocarpa]                           49   6e-10

>ref|XP_003629917.1| hypothetical protein MTR_8g088330 [Medicago truncatula]
           gi|355523939|gb|AET04393.1| hypothetical protein
           MTR_8g088330 [Medicago truncatula]
           gi|388510852|gb|AFK43492.1| unknown [Medicago
           truncatula]
          Length = 158

 Score = 67.4 bits (163), Expect(2) = 7e-22
 Identities = 29/40 (72%), Positives = 36/40 (90%)
 Frame = +3

Query: 3   VLFIAGDSTARELRPSEHGLVFQTLSPAGAHSSPEMRSFF 122
           +L +AG S+AR+LRP++HGL+FQTLSP G HSSPEMRSFF
Sbjct: 10  ILILAGYSSARDLRPADHGLIFQTLSPTGTHSSPEMRSFF 49



 Score = 62.8 bits (151), Expect(2) = 7e-22
 Identities = 34/74 (45%), Positives = 46/74 (62%)
 Frame = +1

Query: 214 DVALPRAMNSGDASPPXXXXXXXXXXXXXXXXKALTAASLACGVAGAILLVASGLIYVFK 393
           +VA+P+A  SG+ +PP                 +L  ASLACGVAGAIL++ SGLIYVFK
Sbjct: 63  EVAMPKAFTSGNTAPPSWSSVSGDGSSDRVW-NSLKVASLACGVAGAILILVSGLIYVFK 121

Query: 394 YRKHKRNAASNIGH 435
           YRK ++  A+  G+
Sbjct: 122 YRKQEQQNAAFRGN 135


>ref|XP_002523189.1| conserved hypothetical protein [Ricinus communis]
           gi|223537596|gb|EEF39220.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 164

 Score = 55.8 bits (133), Expect(2) = 2e-12
 Identities = 29/73 (39%), Positives = 40/73 (54%)
 Frame = +1

Query: 214 DVALPRAMNSGDASPPXXXXXXXXXXXXXXXXKALTAASLACGVAGAILLVASGLIYVFK 393
           +VALP+AMNS D +                    L  AS+ACG  GA LLVASG++Y  K
Sbjct: 82  NVALPKAMNSNDTAWWNGIAGKNNGDHGDQLRHVLLVASVACGATGAALLVASGIVYFVK 141

Query: 394 YRKHKRNAASNIG 432
           Y+K K  +++ +G
Sbjct: 142 YKKRKATSSTTLG 154



 Score = 42.4 bits (98), Expect(2) = 2e-12
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = +3

Query: 24  STARELRPSEHGLVFQTLSPAGAHSSPEMRSFF 122
           S ARELRPS HGL +Q+ +P G    PEM  FF
Sbjct: 32  SAARELRPSVHGLEYQSTAPVGEKLPPEMEEFF 64


>ref|XP_002298888.1| predicted protein [Populus trichocarpa] gi|118485886|gb|ABK94789.1|
           unknown [Populus trichocarpa]
           gi|222846146|gb|EEE83693.1| predicted protein [Populus
           trichocarpa]
          Length = 163

 Score = 48.5 bits (114), Expect(2) = 5e-10
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +3

Query: 3   VLFIAGDSTARELRPSEHGLVFQTLSPAGAHSSPEMRSFF 122
           ++ I  DS ARELRPS+HGL +Q++ P G    P+M+ FF
Sbjct: 23  MIIIVQDSKARELRPSDHGLEYQSMPPTGVRFPPDMKQFF 62



 Score = 41.6 bits (96), Expect(2) = 5e-10
 Identities = 27/72 (37%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = +1

Query: 217 VALPRAMNSGDAS--PPXXXXXXXXXXXXXXXXKALTAASLACGVAGAILLVASGLIYVF 390
           VALP+AMNS D S                      L  ASL CGV G  LLV S LI+ F
Sbjct: 76  VALPKAMNSNDTSWWSGGGGGGGGGGGGGDHVRHVLLVASLVCGVTGLALLVTSALIFYF 135

Query: 391 KYRKHKRNAASN 426
              K++ + +S+
Sbjct: 136 MRHKNQSSPSSS 147


>gb|ABK96040.1| unknown [Populus trichocarpa]
          Length = 162

 Score = 48.5 bits (114), Expect(2) = 6e-10
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +3

Query: 3   VLFIAGDSTARELRPSEHGLVFQTLSPAGAHSSPEMRSFF 122
           ++ I  DS ARELRPS+HGL +Q++ P G    P+M+ FF
Sbjct: 23  MIIIVQDSKARELRPSDHGLEYQSMPPTGVRFPPDMKQFF 62



 Score = 41.2 bits (95), Expect(2) = 6e-10
 Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = +1

Query: 217 VALPRAMNSGDASPPXXXXXXXXXXXXXXXXK-ALTAASLACGVAGAILLVASGLIYVFK 393
           VALP+AMNS D S                  +  L  ASL CGV G  LLV S LI+ F 
Sbjct: 76  VALPKAMNSNDTSWWRAAGGGGGGGGGGDHVRHVLLVASLVCGVTGLALLVTSALIFYFM 135

Query: 394 YRKHKRNAASN 426
             K++ + +S+
Sbjct: 136 RHKNQSSPSSS 146


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