BLASTX nr result

ID: Glycyrrhiza24_contig00013962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013962
         (1103 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycin...   394   e-107
ref|XP_003615951.1| U1 small nuclear ribonucleoprotein A [Medica...   394   e-107
ref|NP_001237887.1| uncharacterized protein LOC100499914 [Glycin...   389   e-106
gb|AFK38999.1| unknown [Medicago truncatula]                          389   e-106
gb|ACJ83293.1| unknown [Medicago truncatula]                          354   2e-95

>ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycine max]
            gi|255647802|gb|ACU24361.1| unknown [Glycine max]
          Length = 232

 Score =  394 bits (1013), Expect = e-107
 Identities = 198/232 (85%), Positives = 204/232 (87%)
 Frame = -1

Query: 1001 MLSGDIPPNQTIYIKNLNEKVKKDELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVCFS 822
            MLSGDIPPNQTIYIKN+NEKVKKDELKRSLYCLFSQYGRILDV+ALKTPKLRGQAWVCFS
Sbjct: 1    MLSGDIPPNQTIYIKNINEKVKKDELKRSLYCLFSQYGRILDVIALKTPKLRGQAWVCFS 60

Query: 821  EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSYVPXXXXXXXXXXXXXXXXX 642
            EVTAASNAVRQMQNFPFY+KPMRIQYAKTKSDCIAKEEG+YVP                 
Sbjct: 61   EVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCIAKEEGTYVPREKKKKQEEKAERKRRA 120

Query: 641  XXXXQSAVPNGTHGASNGGPTASFRPGPSAQEAAAPNNILFIENLPYETTGRMLEMLFEQ 462
                QS V NGTH ASNGGPTASFR GP AQE AAPNNILFIENLP+ETTGRMLEMLFEQ
Sbjct: 121  EEAQQSGVANGTHSASNGGPTASFRQGPGAQETAAPNNILFIENLPHETTGRMLEMLFEQ 180

Query: 461  YPGFKEVRLIEAKPGIAFVDFEDEVQSSMAMQALQGFKITPQNPMMITFAKK 306
            YPGFKEVRLIEAKPGIAFVDFEDEVQSSMAMQAL GFKITPQNPM+ITFAKK
Sbjct: 181  YPGFKEVRLIEAKPGIAFVDFEDEVQSSMAMQALHGFKITPQNPMIITFAKK 232


>ref|XP_003615951.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
            gi|355517286|gb|AES98909.1| U1 small nuclear
            ribonucleoprotein A [Medicago truncatula]
            gi|388501104|gb|AFK38618.1| unknown [Medicago truncatula]
          Length = 233

 Score =  394 bits (1012), Expect = e-107
 Identities = 200/233 (85%), Positives = 206/233 (88%), Gaps = 1/233 (0%)
 Frame = -1

Query: 1001 MLSGDIPPNQTIYIKNLNEKVKKDELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVCFS 822
            MLSGDIPPNQTIYIKNLNEK+KKDELKRSLYCLFSQYGRILD++ALKTPKLRGQAWVCFS
Sbjct: 1    MLSGDIPPNQTIYIKNLNEKIKKDELKRSLYCLFSQYGRILDIIALKTPKLRGQAWVCFS 60

Query: 821  EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSYVPXXXXXXXXXXXXXXXXX 642
            EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGS+VP                 
Sbjct: 61   EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSFVPREKKKKQEEKAEKKKYA 120

Query: 641  XXXXQSAVPN-GTHGASNGGPTASFRPGPSAQEAAAPNNILFIENLPYETTGRMLEMLFE 465
                QSAVPN GTHGASNGG TASFRPG  AQEAAAPNNILFIENLPYETTGRMLEMLFE
Sbjct: 121  DESKQSAVPNGGTHGASNGGSTASFRPGSGAQEAAAPNNILFIENLPYETTGRMLEMLFE 180

Query: 464  QYPGFKEVRLIEAKPGIAFVDFEDEVQSSMAMQALQGFKITPQNPMMITFAKK 306
            QYPGFKEVRLIEAKPGIAFVDFED+ QSSMAMQALQGFKITPQNPM+I FAKK
Sbjct: 181  QYPGFKEVRLIEAKPGIAFVDFEDDGQSSMAMQALQGFKITPQNPMIINFAKK 233


>ref|NP_001237887.1| uncharacterized protein LOC100499914 [Glycine max]
            gi|255627621|gb|ACU14155.1| unknown [Glycine max]
          Length = 232

 Score =  389 bits (1000), Expect = e-106
 Identities = 197/232 (84%), Positives = 202/232 (87%)
 Frame = -1

Query: 1001 MLSGDIPPNQTIYIKNLNEKVKKDELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVCFS 822
            MLSGDIPPNQTIYIKNLNEKVKKDELKRSLYCLF QYGRILDV+ALKTPKLRGQAWVCFS
Sbjct: 1    MLSGDIPPNQTIYIKNLNEKVKKDELKRSLYCLFPQYGRILDVIALKTPKLRGQAWVCFS 60

Query: 821  EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSYVPXXXXXXXXXXXXXXXXX 642
            EVTAASNAVRQMQNFPFY+KPMRI YAKTKSDCIAKEEGS+VP                 
Sbjct: 61   EVTAASNAVRQMQNFPFYDKPMRIHYAKTKSDCIAKEEGSFVPREKKKKQEEKAERKRRV 120

Query: 641  XXXXQSAVPNGTHGASNGGPTASFRPGPSAQEAAAPNNILFIENLPYETTGRMLEMLFEQ 462
                QS V NGTH ASNGGPTASFR GP AQEAAAPNNILFIENLP+ETTGRMLEMLFEQ
Sbjct: 121  EEAQQSGVANGTHSASNGGPTASFRQGPGAQEAAAPNNILFIENLPHETTGRMLEMLFEQ 180

Query: 461  YPGFKEVRLIEAKPGIAFVDFEDEVQSSMAMQALQGFKITPQNPMMITFAKK 306
            YPGFKEV LIEAKPGIAFVDFEDEVQSSMAMQAL GFKITPQNPM+ITFAKK
Sbjct: 181  YPGFKEVCLIEAKPGIAFVDFEDEVQSSMAMQALHGFKITPQNPMIITFAKK 232


>gb|AFK38999.1| unknown [Medicago truncatula]
          Length = 234

 Score =  389 bits (1000), Expect = e-106
 Identities = 200/234 (85%), Positives = 206/234 (88%), Gaps = 2/234 (0%)
 Frame = -1

Query: 1001 MLSGDIPPNQTIYIKNLNEKVKKDELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVCFS 822
            MLSGDIPPNQTIYIKNLNEK+KKDELKRSLYCLFSQYGRILD++ALKTPKLRGQAWVCFS
Sbjct: 1    MLSGDIPPNQTIYIKNLNEKIKKDELKRSLYCLFSQYGRILDIIALKTPKLRGQAWVCFS 60

Query: 821  EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSYVPXXXXXXXXXXXXXXXXX 642
            EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGS+VP                 
Sbjct: 61   EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSFVPREKKKKQEEKAEKKKYA 120

Query: 641  XXXXQSAVPN-GTHGASNGGPT-ASFRPGPSAQEAAAPNNILFIENLPYETTGRMLEMLF 468
                QSAVPN GTHGASNGG T ASFRPG  AQEAAAPNNILFIENLPYETTGRMLEMLF
Sbjct: 121  DESKQSAVPNGGTHGASNGGSTQASFRPGSGAQEAAAPNNILFIENLPYETTGRMLEMLF 180

Query: 467  EQYPGFKEVRLIEAKPGIAFVDFEDEVQSSMAMQALQGFKITPQNPMMITFAKK 306
            EQYPGFKEVRLIEAKPGIAFVDFED+ QSSMAMQALQGFKITPQNPM+I FAKK
Sbjct: 181  EQYPGFKEVRLIEAKPGIAFVDFEDDGQSSMAMQALQGFKITPQNPMIINFAKK 234


>gb|ACJ83293.1| unknown [Medicago truncatula]
          Length = 211

 Score =  354 bits (908), Expect = 2e-95
 Identities = 180/211 (85%), Positives = 185/211 (87%), Gaps = 1/211 (0%)
 Frame = -1

Query: 1001 MLSGDIPPNQTIYIKNLNEKVKKDELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVCFS 822
            MLSGDIPPNQTIYIKNLNEK+KKDELKRSLYCLFSQYGRILD++ALKTPKLRGQAWVCFS
Sbjct: 1    MLSGDIPPNQTIYIKNLNEKIKKDELKRSLYCLFSQYGRILDIIALKTPKLRGQAWVCFS 60

Query: 821  EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSYVPXXXXXXXXXXXXXXXXX 642
            EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGS+VP                 
Sbjct: 61   EVTAASNAVRQMQNFPFYEKPMRIQYAKTKSDCIAKEEGSFVPREKKKKQEEKAEKKKYA 120

Query: 641  XXXXQSAVPN-GTHGASNGGPTASFRPGPSAQEAAAPNNILFIENLPYETTGRMLEMLFE 465
                QSAVPN GTHGASNGG TASFRPG  AQEAAAPNNILFIENLPYETTGRMLEMLFE
Sbjct: 121  DESKQSAVPNGGTHGASNGGSTASFRPGSGAQEAAAPNNILFIENLPYETTGRMLEMLFE 180

Query: 464  QYPGFKEVRLIEAKPGIAFVDFEDEVQSSMA 372
            QYPGFKEVRLIEAKPGIAFVDFED+ QSSMA
Sbjct: 181  QYPGFKEVRLIEAKPGIAFVDFEDDGQSSMA 211


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