BLASTX nr result

ID: Glycyrrhiza24_contig00013961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013961
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629344.1| Heterogeneous nuclear ribonucleoprotein Q [M...   228   6e-58
ref|XP_003548856.1| PREDICTED: uncharacterized protein LOC100819...   199   4e-49
ref|XP_003519874.1| PREDICTED: uncharacterized protein LOC100784...   196   2e-48
ref|XP_002531520.1| RNA binding protein, putative [Ricinus commu...    66   7e-09
gb|EHK95998.1| hypothetical protein M7I_8323 [Glarea lozoyensis ...    55   9e-06

>ref|XP_003629344.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula]
           gi|355523366|gb|AET03820.1| Heterogeneous nuclear
           ribonucleoprotein Q [Medicago truncatula]
          Length = 989

 Score =  228 bits (582), Expect = 6e-58
 Identities = 137/219 (62%), Positives = 154/219 (70%), Gaps = 1/219 (0%)
 Frame = -1

Query: 656 DSSSKPATAKKTPPARKSATKTAGESPAAKRTPASKTRSAKKTEASPAPDSIPDSNTGQS 477
           DSSSK  T KKTPPARKSA    GESPAAKRTP SK ++AKKTEASPA D  PD +    
Sbjct: 7   DSSSKSTTPKKTPPARKSA----GESPAAKRTPPSKPKNAKKTEASPATD--PDQS---- 56

Query: 476 RQEQKSLASATTTKSAKRKIPGRKPRTKVVA-TPNLEEQLEAAADETSIVGNSEAAEKVE 300
            Q++K LASATT KS K K PG KPRTKVVA TPNLEE+LE  ADET+++      +KVE
Sbjct: 57  -QKKKLLASATTAKSGKWKSPG-KPRTKVVAVTPNLEEKLEVEADETTVI------DKVE 108

Query: 299 EPGNVEVVDADNIXXXXXXXXXXXXGLSDEKEHKPMEVDEPVVEKVCELVEMGKSLVEVE 120
           E GNV  +DAD +                E E KPMEVD+PVVEKVCELVE GKS VEVE
Sbjct: 109 EVGNVNDIDADTMEC------------EKEGEQKPMEVDQPVVEKVCELVEKGKSTVEVE 156

Query: 119 VTSSQDASVSFKRPGCTIVDLNLSAADNEDSTGAKEGEE 3
              SQD S+S K+PGCT+VDLN+SAADNED TG KEG E
Sbjct: 157 PIFSQDGSISLKQPGCTLVDLNISAADNEDYTGVKEGGE 195


>ref|XP_003548856.1| PREDICTED: uncharacterized protein LOC100819035 [Glycine max]
          Length = 953

 Score =  199 bits (506), Expect = 4e-49
 Identities = 124/219 (56%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
 Frame = -1

Query: 656 DSSSKPATAKKTPPARKSATKTAGESPAAKRTPASKTRSAKKTEASPAPDSIPDSNTGQS 477
           DS+SK AT KKTPP          +SPAAKRT A+KTR+ KK E SPAPDS    N  QS
Sbjct: 7   DSASKSATPKKTPPPPPR------KSPAAKRTTATKTRATKKNEVSPAPDS----NPYQS 56

Query: 476 RQEQKSLASATTTKSAKRKIPGRKPRTKVVATPNLEEQLEAAADETSIVGNSEAAEKVEE 297
             EQ+SL SA++ K  K+K PGR PR+K + TPN EEQ EA  DET I  ++E  EKVE+
Sbjct: 57  PLEQESLGSASSAKFVKKKTPGR-PRSKAIDTPNSEEQCEAVTDETLIEDDTEVVEKVED 115

Query: 296 PGNVEVVDADNIXXXXXXXXXXXXG-LSDEKEHKPMEVDEPVVEKVCELVEMGKSLVEVE 120
            G   VV A ++              LSDE E K MEV+EPVVEKVCELVE G  ++EVE
Sbjct: 116 VG---VVGAGSVEGEKEGGQGVGSVGLSDETEGKSMEVNEPVVEKVCELVEKGNDVMEVE 172

Query: 119 VTSSQDASVSFKRPGCTIVDLNLSAADNEDSTGAKEGEE 3
           V +SQDASVSFKR G  IVDLN+S ADNED TG KEGE+
Sbjct: 173 VAASQDASVSFKRLGRPIVDLNIS-ADNEDCTGEKEGEK 210


>ref|XP_003519874.1| PREDICTED: uncharacterized protein LOC100784338 [Glycine max]
          Length = 884

 Score =  196 bits (499), Expect = 2e-48
 Identities = 123/219 (56%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
 Frame = -1

Query: 656 DSSSKPATAKKTPPARKSATKTAGESPAAKRTPASKTRSAKKTEASPAPDSIPDSNTGQS 477
           DS+SK AT KKTPP +         SPAAKRT A+KTR+ KK E SPAPDS PD    QS
Sbjct: 7   DSASKSATPKKTPPKK---------SPAAKRTTATKTRATKKNELSPAPDSNPD----QS 53

Query: 476 RQEQKSLASATTTKSAKRKIPGRKPRTKVVATPNLEEQLEAAADETSIVGNSEAAEKVEE 297
             EQKSL SA++ KS K+K PGR  R+K + TPN EEQ EA ADET I  ++E AEKVE+
Sbjct: 54  PLEQKSLGSASSAKSVKKKTPGRS-RSKAINTPNSEEQCEAVADETPIEDDTEVAEKVED 112

Query: 296 PGNVEVVDADNIXXXXXXXXXXXXG-LSDEKEHKPMEVDEPVVEKVCELVEMGKSLVEVE 120
            G   VVDADN+              LSDE + K MEVDE +V+KVCE V     ++EVE
Sbjct: 113 VG---VVDADNVEGEKEGGKGVGSVGLSDETDRKSMEVDE-LVQKVCESVGKENDVMEVE 168

Query: 119 VTSSQDASVSFKRPGCTIVDLNLSAADNEDSTGAKEGEE 3
           V +  DASVSF+RPG  IVDLN+S ADNED TG KEGE+
Sbjct: 169 VAACWDASVSFRRPGRPIVDLNIS-ADNEDCTGEKEGEK 206


>ref|XP_002531520.1| RNA binding protein, putative [Ricinus communis]
           gi|223528873|gb|EEF30874.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 841

 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 13/190 (6%)
 Frame = -1

Query: 650 SSKPATAKKTPPARKSATKTAGESPAA-----------KRTPASKTRSAKKTEASPAPDS 504
           ++K  T KKT PARK A KT  +S  A           KR+ A+K + AK  E++ AP  
Sbjct: 8   ATKSVTPKKTTPARKCAPKTTPDSTPADSSSTPKTTETKRSAAAKAKQAKTNESATAPSP 67

Query: 503 IPDSNTGQSRQEQKSLASATTTKSAKRKIPGRKPRTKVVATPNLEEQLEAAADETSI--V 330
           I  S++ + +Q  + +  A T+ + + K+    P+ + V    +++ ++ A   TSI  V
Sbjct: 68  IASSDS-KPQQSTEVVVDAATSVTPETKV---APKKRTVVRKVVKKVVKKAKTPTSIKEV 123

Query: 329 GNSEAAEKVEEPGNVEVVDADNIXXXXXXXXXXXXGLSDEKEHKPMEVDEPVVEKVCELV 150
            + +  + + E       D ++               S + E    +V EPV   V EL 
Sbjct: 124 VSEDTPKTMTEEETASAKDEESAKEEVEPAIETAVAESTKDEKITAQVAEPVAVSVEELS 183

Query: 149 EMGKSLVEVE 120
           E GK++VEVE
Sbjct: 184 EKGKAIVEVE 193


>gb|EHK95998.1| hypothetical protein M7I_8323 [Glarea lozoyensis 74030]
          Length = 377

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 22/238 (9%)
 Frame = -1

Query: 650 SSKPA---TAKKTPPARKSATKTAGESPAAKRTPASKTRSAKKTEASPAPDSIPDSNTGQ 480
           +SKPA   TAK +  ++ S  K+  +SPA  +TP + +R+ KK   + AP       +  
Sbjct: 86  TSKPASISTAKPSAASKPSPNKSL-KSPAPPKTPTTPSRATKKEPPTKAPAPKTSKASTT 144

Query: 479 SRQEQKSLASATTTKSAKRKIP-------GRKPRTKVVATPNLEE-------QLEAAADE 342
            +++ K+L  A++     + +P       G+   T  V  P + E       Q E + D+
Sbjct: 145 PKRDPKTLKKASSAAEPAKPLPKEKKPVEGKPQDTSSVEQPAISEEAAEADAQPEPSTDK 204

Query: 341 TSIVGNSEAAEK---VEEPGNVEVVDADNIXXXXXXXXXXXXGLSDEKEHKPMEV--DEP 177
              V    AA +    EEP   E +  + +              + +   +P+ V  + P
Sbjct: 205 AQAVDEQAAAVEELAKEEPTIPETIQEEPVVEKSEVSQEVTSESAKKPSIEPVGVKGEAP 264

Query: 176 VVEKVCELVEMGKSLVEVEVTSSQDASVSFKRPGCTIVDLNLSAADNEDSTGAKEGEE 3
            VEK  E V+      +V V+  QD   S       +VD +    + E+  G +E EE
Sbjct: 265 KVEK-AEAVDDNAGKADVNVSEPQDREPSADEARAGVVDDDEEEEEEEEEEGDEEEEE 321


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