BLASTX nr result

ID: Glycyrrhiza24_contig00013929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013929
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603541.1| hypothetical protein MTR_3g108900 [Medicago ...   305   5e-81
ref|XP_003526457.1| PREDICTED: putative peptidyl-tRNA hydrolase ...   254   1e-65
ref|XP_003522666.1| PREDICTED: putative peptidyl-tRNA hydrolase ...   248   7e-64
ref|XP_004138768.1| PREDICTED: putative peptidyl-tRNA hydrolase ...   204   2e-50
ref|XP_002515344.1| conserved hypothetical protein [Ricinus comm...   202   5e-50

>ref|XP_003603541.1| hypothetical protein MTR_3g108900 [Medicago truncatula]
           gi|355492589|gb|AES73792.1| hypothetical protein
           MTR_3g108900 [Medicago truncatula]
          Length = 206

 Score =  305 bits (782), Expect = 5e-81
 Identities = 156/187 (83%), Positives = 166/187 (88%)
 Frame = -2

Query: 744 LRVSLSMACTIPSLRLFNPSGSYLAFSSTKVSVTHLHAASFSNRASGLSPNSMSQPAASN 565
           +RVSLSMA TIP+LRLFNPSGSYLAFS TK SVT LHAASFSN+ S L+ NSMSQPAA++
Sbjct: 17  VRVSLSMAYTIPTLRLFNPSGSYLAFSRTKFSVT-LHAASFSNKTSQLNRNSMSQPAATD 75

Query: 564 PNTLSTPNVAPSPPENADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKGDPLT 385
              LSTP      PEN DVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSA+W NK DP+T
Sbjct: 76  STNLSTPT---DSPENVDVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWFNKDDPVT 132

Query: 384 VDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWIEQPENIPTCLATKPYPK 205
           +DYCSP+KIDSM KVTLEVKGE QIKNLSEKLTSGGIIHKLWIEQPENIPTCLATKPYPK
Sbjct: 133 IDYCSPEKIDSMRKVTLEVKGELQIKNLSEKLTSGGIIHKLWIEQPENIPTCLATKPYPK 192

Query: 204 SIVSSYF 184
           SIVSSYF
Sbjct: 193 SIVSSYF 199


>ref|XP_003526457.1| PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1-like [Glycine
           max]
          Length = 167

 Score =  254 bits (650), Expect = 1e-65
 Identities = 137/183 (74%), Positives = 143/183 (78%), Gaps = 2/183 (1%)
 Frame = -2

Query: 726 MACTIPSLRLFNPSGSYLAFSSTKVSVT--HLHAASFSNRASGLSPNSMSQPAASNPNTL 553
           MAC IP LRL        AF ST +  T  HLHA S S+R S LS NSMSQPA +N    
Sbjct: 1   MACGIP-LRLS-------AFPSTTIRATLPHLHAPSISSRPSPLSSNSMSQPATTN---- 48

Query: 552 STPNVAPSPPENADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKGDPLTVDYC 373
                      +ADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSA+W NK DP TVDYC
Sbjct: 49  -----------HADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWFNKDDPFTVDYC 97

Query: 372 SPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWIEQPENIPTCLATKPYPKSIVS 193
           SPDKIDSMHKVTLEVKGEPQIKNLSEKLT+GGIIHKLWIEQPENIPTCLATKPYPKSIVS
Sbjct: 98  SPDKIDSMHKVTLEVKGEPQIKNLSEKLTAGGIIHKLWIEQPENIPTCLATKPYPKSIVS 157

Query: 192 SYF 184
           SYF
Sbjct: 158 SYF 160


>ref|XP_003522666.1| PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1-like [Glycine
           max]
          Length = 143

 Score =  248 bits (634), Expect = 7e-64
 Identities = 121/136 (88%), Positives = 127/136 (93%), Gaps = 1/136 (0%)
 Frame = -2

Query: 588 MSQPAAS-NPNTLSTPNVAPSPPENADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAI 412
           MSQ AA+ +PN ++T N APS PENADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSA+
Sbjct: 1   MSQSAATADPNAIATTNDAPSQPENADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAV 60

Query: 411 WSNKGDPLTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWIEQPENIPT 232
           WSNK DP TVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLT+GGIIHKLWIEQPENIPT
Sbjct: 61  WSNKEDPFTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTAGGIIHKLWIEQPENIPT 120

Query: 231 CLATKPYPKSIVSSYF 184
           CLATKPYPKS VSSYF
Sbjct: 121 CLATKPYPKSSVSSYF 136


>ref|XP_004138768.1| PREDICTED: putative peptidyl-tRNA hydrolase PTRHD1-like [Cucumis
           sativus]
          Length = 192

 Score =  204 bits (519), Expect = 2e-50
 Identities = 109/188 (57%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
 Frame = -2

Query: 744 LRVSLSMA-CTIPSLRLFNPSGSYLAFSSTKVSVTHLHAASFSNRASGLSPNSMSQPAAS 568
           L +S S++ C+ P  R+F PS S    SS + +    H    ++ +  +  NS+S P  +
Sbjct: 12  LSISKSISLCSCPRSRVF-PSSSLSLHSSIRKT----HPFCSASMSQSVETNSVSTPDDA 66

Query: 567 NPNTLSTPNVAPSPPENADVVVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKGDPL 388
                 TP         ADV++QYVVLRRDLID+WPLGSVVTQGCHASVSAIW NK DP 
Sbjct: 67  GAKAEETP---------ADVLIQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDPH 117

Query: 387 TVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWIEQPENIPTCLATKPYP 208
           T DYC+P  IDSMHKVTLEVKGE Q+ NLSEKL +  I+HKLWIEQPENIPTCLATKPYP
Sbjct: 118 TSDYCNPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIVHKLWIEQPENIPTCLATKPYP 177

Query: 207 KSIVSSYF 184
           KS+VS +F
Sbjct: 178 KSVVSPFF 185


>ref|XP_002515344.1| conserved hypothetical protein [Ricinus communis]
           gi|223545288|gb|EEF46793.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 186

 Score =  202 bits (515), Expect = 5e-50
 Identities = 102/168 (60%), Positives = 120/168 (71%), Gaps = 11/168 (6%)
 Frame = -2

Query: 654 VSVTHLHAASFSNRASGLSP-----------NSMSQPAASNPNTLSTPNVAPSPPENADV 508
           +S TH  A  +  R S L+            NSMSQ ++ +    S    A    +  DV
Sbjct: 12  LSFTHFRAYGYKTRVSDLTSLLQPRTTRLGTNSMSQSSSESDAANSKNGEARGEIQPEDV 71

Query: 507 VVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKGDPLTVDYCSPDKIDSMHKVTLEV 328
           +VQYVVLRRDLIDTWP+GSVVTQGCHASVSAIW NK DP T+ YCSP+ ID MHKVTLEV
Sbjct: 72  LVQYVVLRRDLIDTWPMGSVVTQGCHASVSAIWENKDDPHTLQYCSPENIDFMHKVTLEV 131

Query: 327 KGEPQIKNLSEKLTSGGIIHKLWIEQPENIPTCLATKPYPKSIVSSYF 184
           KGE Q+ NLSEKLT+ GI+HKLWIEQPENIPTCLAT+PYPKS ++ +F
Sbjct: 132 KGEAQMLNLSEKLTAAGIVHKLWIEQPENIPTCLATRPYPKSALTLFF 179


Top