BLASTX nr result

ID: Glycyrrhiza24_contig00013920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013920
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus...   273   2e-71
ref|XP_004139687.1| PREDICTED: 40S ribosomal protein S18-like [C...   273   3e-71
emb|CBI28706.3| unnamed protein product [Vitis vinifera]              271   9e-71
emb|CBI18243.3| unnamed protein product [Vitis vinifera]              270   2e-70
ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus...   270   2e-70

>ref|XP_002524340.1| 40S ribosomal protein S18, putative [Ricinus communis]
           gi|223536431|gb|EEF38080.1| 40S ribosomal protein S18,
           putative [Ricinus communis]
          Length = 152

 Score =  273 bits (698), Expect = 2e-71
 Identities = 138/152 (90%), Positives = 139/152 (91%)
 Frame = -3

Query: 653 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 474
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 473 AAELDQLMVIVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 294
           AAELD LMVIVANPRQFKIPDWFLNR+KDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAELDNLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 293 RGLRHYWGLRVRGQHXXXXXXXXXXXXVSKKR 198
           RGLRHYWGLRVRGQH            VSKKR
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


>ref|XP_004139687.1| PREDICTED: 40S ribosomal protein S18-like [Cucumis sativus]
           gi|449525091|ref|XP_004169553.1| PREDICTED: 40S
           ribosomal protein S18-like [Cucumis sativus]
          Length = 152

 Score =  273 bits (697), Expect = 3e-71
 Identities = 137/152 (90%), Positives = 139/152 (91%)
 Frame = -3

Query: 653 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 474
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 60

Query: 473 AAELDQLMVIVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 294
           AAELD LMV+VANPRQFKIPDWFLNR+KDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAELDNLMVVVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 293 RGLRHYWGLRVRGQHXXXXXXXXXXXXVSKKR 198
           RGLRHYWGLRVRGQH            VSKKR
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


>emb|CBI28706.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  271 bits (693), Expect = 9e-71
 Identities = 137/163 (84%), Positives = 143/163 (87%)
 Frame = -3

Query: 686  RVERARERESIMSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKAD 507
            ++ RA      MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKAD
Sbjct: 750  QLRRASSETLTMSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKAD 809

Query: 506  VDMNKRAGELTAAELDQLMVIVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRD 327
            VDMNKRAGEL+AAEL+ LMVIVANPRQFKIPDWFLNRKKDYKDG+YSQVVSNALDMKLRD
Sbjct: 810  VDMNKRAGELSAAELENLMVIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRD 869

Query: 326  DLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXVSKKR 198
            DLERLKKIRNHRGLRHYWGLRVRGQH            VSKKR
Sbjct: 870  DLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 912


>emb|CBI18243.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score =  270 bits (690), Expect = 2e-70
 Identities = 136/154 (88%), Positives = 140/154 (90%)
 Frame = -3

Query: 659 SIMSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGE 480
           S MSLVANE+FQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGE
Sbjct: 41  STMSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGE 100

Query: 479 LTAAELDQLMVIVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIR 300
           L+AAEL+ LMVIVANPRQFKIPDWFLNRKKDYKDG+YSQVVSNALDMKLRDDLERLKKIR
Sbjct: 101 LSAAELENLMVIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKLRDDLERLKKIR 160

Query: 299 NHRGLRHYWGLRVRGQHXXXXXXXXXXXXVSKKR 198
           NHRGLRHYWGLRVRGQH            VSKKR
Sbjct: 161 NHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 194


>ref|XP_002520719.1| 40S ribosomal protein S18, putative [Ricinus communis]
           gi|223540104|gb|EEF41681.1| 40S ribosomal protein S18,
           putative [Ricinus communis] gi|313586541|gb|ADR71281.1|
           40S ribosomal protein S18A [Hevea brasiliensis]
          Length = 152

 Score =  270 bits (690), Expect = 2e-70
 Identities = 136/152 (89%), Positives = 139/152 (91%)
 Frame = -3

Query: 653 MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELT 474
           MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGEL+
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELS 60

Query: 473 AAELDQLMVIVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 294
           A ELD+LMVIVANPRQFKIPDWFLNR+KDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AEELDKLMVIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 293 RGLRHYWGLRVRGQHXXXXXXXXXXXXVSKKR 198
           RGLRHYWGLRVRGQH            VSKKR
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


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