BLASTX nr result

ID: Glycyrrhiza24_contig00013908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013908
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520815.1| PREDICTED: nuclear transcription factor Y su...    99   5e-19
ref|XP_003555596.1| PREDICTED: nuclear transcription factor Y su...    97   1e-18
gb|ADB23456.1| nuclear factor Y subunit C [Phaseolus vulgaris]         97   1e-18
ref|XP_003591084.1| Nuclear transcription factor Y subunit C-9 [...    95   7e-18
ref|XP_003535348.1| PREDICTED: nuclear transcription factor Y su...    94   1e-17

>ref|XP_003520815.1| PREDICTED: nuclear transcription factor Y subunit C-9-like [Glycine
           max]
          Length = 285

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/55 (83%), Positives = 48/55 (87%)
 Frame = -2

Query: 216 GHGQNPSMGVVGSGQQVTYGSNPYQPNHITGSPGMVVSSVGTIQSTGQPAGAQLG 52
           GH QNPSMGVVGSG Q+ YGSNPYQP  ITG PG VV+SVGTIQSTGQPAGAQLG
Sbjct: 5   GHSQNPSMGVVGSGAQLAYGSNPYQPGQITGPPGSVVTSVGTIQSTGQPAGAQLG 59


>ref|XP_003555596.1| PREDICTED: nuclear transcription factor Y subunit C-9-like [Glycine
           max]
          Length = 263

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 44/55 (80%), Positives = 49/55 (89%)
 Frame = -2

Query: 216 GHGQNPSMGVVGSGQQVTYGSNPYQPNHITGSPGMVVSSVGTIQSTGQPAGAQLG 52
           GHGQNPSMG+VG+G Q+ YGSNPYQ +HITGSPGMVV+S GTIQSTGQPA  QLG
Sbjct: 7   GHGQNPSMGIVGNGPQLPYGSNPYQASHITGSPGMVVASPGTIQSTGQPAATQLG 61


>gb|ADB23456.1| nuclear factor Y subunit C [Phaseolus vulgaris]
          Length = 260

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/55 (81%), Positives = 49/55 (89%)
 Frame = -2

Query: 216 GHGQNPSMGVVGSGQQVTYGSNPYQPNHITGSPGMVVSSVGTIQSTGQPAGAQLG 52
           GHGQNPSMGVVGSG Q+TYGSNPYQ   +TG PG VV+SVGTIQS+GQPAGAQLG
Sbjct: 5   GHGQNPSMGVVGSGAQLTYGSNPYQQGQLTGPPGSVVTSVGTIQSSGQPAGAQLG 59


>ref|XP_003591084.1| Nuclear transcription factor Y subunit C-9 [Medicago truncatula]
           gi|217072190|gb|ACJ84455.1| unknown [Medicago
           truncatula] gi|355480132|gb|AES61335.1| Nuclear
           transcription factor Y subunit C-9 [Medicago truncatula]
           gi|388510060|gb|AFK43096.1| unknown [Medicago
           truncatula] gi|388523235|gb|AFK49670.1| nuclear
           transcription factor Y subunit C1 [Medicago truncatula]
          Length = 256

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/55 (80%), Positives = 46/55 (83%)
 Frame = -2

Query: 216 GHGQNPSMGVVGSGQQVTYGSNPYQPNHITGSPGMVVSSVGTIQSTGQPAGAQLG 52
           GHGQNP+MGVVGSGQ   YGSNPYQPN +TGSPGMVV SVGTIQ  GQP G QLG
Sbjct: 5   GHGQNPNMGVVGSGQMAPYGSNPYQPNPMTGSPGMVVPSVGTIQPGGQPDGTQLG 59


>ref|XP_003535348.1| PREDICTED: nuclear transcription factor Y subunit C-9-like [Glycine
           max]
          Length = 264

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/55 (78%), Positives = 47/55 (85%)
 Frame = -2

Query: 216 GHGQNPSMGVVGSGQQVTYGSNPYQPNHITGSPGMVVSSVGTIQSTGQPAGAQLG 52
           GHGQNPSMGVVG+G Q  YGSNPYQ +H+TGSPGMVV+S GTIQSTGQP   QLG
Sbjct: 9   GHGQNPSMGVVGNGPQFPYGSNPYQASHMTGSPGMVVASPGTIQSTGQPPSTQLG 63


Top