BLASTX nr result

ID: Glycyrrhiza24_contig00013904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013904
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...    72   6e-11
ref|XP_003521569.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...    69   4e-10
ref|XP_003554525.1| PREDICTED: uncharacterized protein LOC100527...    69   5e-10
gb|ABY77914.1| NADH-ubiquinone oxidoreductase-like protein [Came...    68   9e-10
gb|AFK48428.1| unknown [Lotus japonicus]                               66   3e-09

>ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 401

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/81 (49%), Positives = 49/81 (60%)
 Frame = +1

Query: 1   CLHHSKEFQRRNRVYKEEQRKLRAAARKGKEDGXXXXXXXXXXXXXXLNWKLPNKYFDKT 180
           CLHHSKEFQRRNR+YKEEQRKLRAAARKG++DG              LN+ L +K     
Sbjct: 44  CLHHSKEFQRRNRIYKEEQRKLRAAARKGQDDGKVAEHHYSRGNTTDLNFPLKSKKRR-- 101

Query: 181 L*FCLGRHSCMSLCYTSNVTG 243
               + RHS  ++ Y  N+ G
Sbjct: 102 ----MSRHSSRTV-YVGNLPG 117


>ref|XP_003521569.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 5-B
           isoform 1 [Glycine max] gi|356505584|ref|XP_003521570.1|
           PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 5-B isoform 2 [Glycine max]
          Length = 82

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/33 (90%), Positives = 33/33 (100%)
 Frame = +1

Query: 1   CLHHSKEFQRRNRVYKEEQRKLRAAARKGKEDG 99
           CLHHSKEFQRRNR+YKEEQRKLRAA+RKG+EDG
Sbjct: 44  CLHHSKEFQRRNRIYKEEQRKLRAASRKGQEDG 76


>ref|XP_003554525.1| PREDICTED: uncharacterized protein LOC100527389 [Glycine max]
          Length = 82

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = +1

Query: 1   CLHHSKEFQRRNRVYKEEQRKLRAAARKGKEDG 99
           CLHHSKEFQRRNR+YKEEQRKLRAA RKG+EDG
Sbjct: 44  CLHHSKEFQRRNRIYKEEQRKLRAATRKGQEDG 76


>gb|ABY77914.1| NADH-ubiquinone oxidoreductase-like protein [Camellia sinensis]
           gi|330318648|gb|AEC10984.1| NADH-ubiquinone
           oxidoreductase-like protein [Camellia sinensis]
          Length = 83

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = +1

Query: 1   CLHHSKEFQRRNRVYKEEQRKLRAAARKGKEDG 99
           CLHHSKEFQRRNRVYKEEQR+LRAAARKGKE G
Sbjct: 44  CLHHSKEFQRRNRVYKEEQRQLRAAARKGKEGG 76


>gb|AFK48428.1| unknown [Lotus japonicus]
          Length = 82

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/33 (84%), Positives = 33/33 (100%)
 Frame = +1

Query: 1   CLHHSKEFQRRNRVYKEEQRKLRAAARKGKEDG 99
           CLHHSKEFQRRNR+YKEEQRKLRAA+RKG+++G
Sbjct: 44  CLHHSKEFQRRNRIYKEEQRKLRAASRKGQDEG 76


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