BLASTX nr result

ID: Glycyrrhiza24_contig00013879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013879
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4...   113   2e-23
ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4...   109   4e-22
ref|XP_003557013.1| PREDICTED: U-box domain-containing protein 4...   107   1e-21
ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   105   5e-21
emb|CBI19404.3| unnamed protein product [Vitis vinifera]              103   2e-20

>ref|XP_004142891.1| PREDICTED: U-box domain-containing protein 4-like [Cucumis sativus]
           gi|449482708|ref|XP_004156379.1| PREDICTED: U-box
           domain-containing protein 4-like [Cucumis sativus]
          Length = 352

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/66 (89%), Positives = 61/66 (92%)
 Frame = -2

Query: 568 AAVILLQICEDSVVYRTMVCREGAIPPLVALSQSGTNRAKQKAETLIELLRQPRSGNAAA 389
           AAVILLQICEDSV+YRTMV REGAIPPLVALSQSGTNRAKQKAE LIELLRQPRSGN AA
Sbjct: 286 AAVILLQICEDSVLYRTMVAREGAIPPLVALSQSGTNRAKQKAEKLIELLRQPRSGNYAA 345

Query: 388 RTSQMS 371
            TS +S
Sbjct: 346 TTSDVS 351


>ref|XP_003550308.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 352

 Score =  109 bits (272), Expect = 4e-22
 Identities = 55/63 (87%), Positives = 58/63 (92%)
 Frame = -2

Query: 568 AAVILLQICEDSVVYRTMVCREGAIPPLVALSQSGTNRAKQKAETLIELLRQPRSGNAAA 389
           A VILLQ+CEDSV YRTMV REGAIPPLVALSQSGTNRAKQKAE LIELLRQPRSGN AA
Sbjct: 285 AVVILLQVCEDSVTYRTMVAREGAIPPLVALSQSGTNRAKQKAEKLIELLRQPRSGNGAA 344

Query: 388 RTS 380
           R++
Sbjct: 345 RST 347


>ref|XP_003557013.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 319

 Score =  107 bits (268), Expect = 1e-21
 Identities = 55/65 (84%), Positives = 58/65 (89%)
 Frame = -2

Query: 562 VILLQICEDSVVYRTMVCREGAIPPLVALSQSGTNRAKQKAETLIELLRQPRSGNAAART 383
           VILLQ+CEDSV YRTMV REGAIPPLVALSQSGTNRAKQKAE LIELLRQPRSG  A RT
Sbjct: 255 VILLQVCEDSVAYRTMVAREGAIPPLVALSQSGTNRAKQKAEKLIELLRQPRSGYGAVRT 314

Query: 382 SQMSA 368
           S++ A
Sbjct: 315 SEVVA 319


>ref|XP_002510099.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223550800|gb|EEF52286.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 352

 Score =  105 bits (262), Expect = 5e-21
 Identities = 53/66 (80%), Positives = 59/66 (89%)
 Frame = -2

Query: 568 AAVILLQICEDSVVYRTMVCREGAIPPLVALSQSGTNRAKQKAETLIELLRQPRSGNAAA 389
           A  ILLQICED+++ R MV REGAIPPL+ALSQSGTNRAKQKAETLI+LLRQPRSGNAAA
Sbjct: 286 AVAILLQICEDNLMRRAMVVREGAIPPLIALSQSGTNRAKQKAETLIDLLRQPRSGNAAA 345

Query: 388 RTSQMS 371
           RT  +S
Sbjct: 346 RTPDVS 351


>emb|CBI19404.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  103 bits (257), Expect = 2e-20
 Identities = 52/66 (78%), Positives = 56/66 (84%)
 Frame = -2

Query: 568 AAVILLQICEDSVVYRTMVCREGAIPPLVALSQSGTNRAKQKAETLIELLRQPRSGNAAA 389
           A  ILLQICEDS+ YR MV REGAIPPLVALSQS  NR+KQKAE LI+LLRQPRSGN AA
Sbjct: 322 AVAILLQICEDSLAYRNMVAREGAIPPLVALSQSSANRSKQKAEALIDLLRQPRSGNVAA 381

Query: 388 RTSQMS 371
           RTS +S
Sbjct: 382 RTSDVS 387


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