BLASTX nr result

ID: Glycyrrhiza24_contig00013862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013862
         (1532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533199.1| PREDICTED: F-box protein At1g60400-like [Gly...   506   e-141
ref|XP_003605910.1| F-box/LRR-repeat protein [Medicago truncatul...   331   3e-88
ref|XP_003526558.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   268   3e-69
ref|XP_003535282.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...   258   3e-66
ref|XP_003606020.1| F-box family protein [Medicago truncatula] g...   249   1e-63

>ref|XP_003533199.1| PREDICTED: F-box protein At1g60400-like [Glycine max]
          Length = 392

 Score =  506 bits (1304), Expect = e-141
 Identities = 259/363 (71%), Positives = 293/363 (80%)
 Frame = +1

Query: 241  MQSERDGKDERDRLSDLPDFVLLQIMKFMNTKHAVQTCVLSTRWKDLWKSLTNLALHSSD 420
            MQS++D +++ DRLSDLPDFVLL IMKFM+ KHAVQTCVLS RWK+LWK LTNLALHSSD
Sbjct: 28   MQSDKDREEDMDRLSDLPDFVLLHIMKFMSMKHAVQTCVLSKRWKELWKRLTNLALHSSD 87

Query: 421  FTSLTHFSKFVSWVLSHRDSSISLHNLDLRRKGCIEPGLLDRVMTYAVSHNVQRLTIDVN 600
            F  L HFSKF+SWVLS+RDSSISLH+LDLRRKGCI+  LLD +M YAVSH+VQ+L I+VN
Sbjct: 88   FADLAHFSKFLSWVLSNRDSSISLHSLDLRRKGCIDHELLDMIMGYAVSHDVQQLAIEVN 147

Query: 601  LNFELGFKLHPCIFFCRSLTHLKLSIWAVPSMTELPTSLQLPALESLHLEHVTFAADDNG 780
            LN + GFKLHP IF C+SLT LKLSIWAVP MTELP+SL LPAL+SLHLEHVT  A +  
Sbjct: 148  LNVKFGFKLHPSIFSCKSLTFLKLSIWAVPWMTELPSSLPLPALKSLHLEHVTLTAGEGD 207

Query: 781  CAEPFSACHRLNTLVLDRCNLHRDAKFLCISNSKLSSLTIGSTIQEVAYKVVLSTPNLSS 960
            CAEPFS CH LNTLVLDRCNLH  AKFLCI NS LSSLTIGST QE  YK VLSTPNL S
Sbjct: 208  CAEPFSTCHVLNTLVLDRCNLHHGAKFLCICNSNLSSLTIGSTTQETPYKFVLSTPNLRS 267

Query: 961  LAVMRDPIHQVSMCSLSLLEQVNIDVEAHFHTNLERIYSALISWLQALASYVKTMTLSSS 1140
            L+VMRDPIHQ+S C LS LEQVNIDVEA+F+ + +R + ALIS LQ LA YVKTM LSSS
Sbjct: 268  LSVMRDPIHQLSACDLSFLEQVNIDVEAYFNAHFQRTHLALISLLQVLADYVKTMILSSS 327

Query: 1141 TLKILNVLSTPGSMTSELPSFVXXXXXXXXXXXXXNISHEEVSRIVECLLQKSRLAKVDI 1320
            TLKILN LST GSM +++P FV             +IS E VSRIVE LL+K  LAKVD+
Sbjct: 328  TLKILNGLSTSGSMITQIPCFVQLKSLKLKMKSSSSISDEGVSRIVEYLLKKCPLAKVDV 387

Query: 1321 IDC 1329
            I+C
Sbjct: 388  INC 390


>ref|XP_003605910.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355506965|gb|AES88107.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 388

 Score =  331 bits (849), Expect = 3e-88
 Identities = 184/323 (56%), Positives = 237/323 (73%), Gaps = 2/323 (0%)
 Frame = +1

Query: 241  MQSERDGKD-ERDRLSDLPDFVLLQIMKFMNTKHAVQTCVLSTRWKDLWKSLTNLALHSS 417
            M+S+RD K+ E+DRLSDL D VLL IMKFM+TK  VQTCVLSTRWK LW+ +T LAL++S
Sbjct: 1    MKSKRDKKEREKDRLSDLCDSVLLNIMKFMDTKQVVQTCVLSTRWKTLWRRVTTLALNNS 60

Query: 418  DFT-SLTHFSKFVSWVLSHRDSSISLHNLDLRRKGCIEPGLLDRVMTYAVSHNVQRLTID 594
             F   L ++++FV  VLSHRD SISL ++ LR +  +EP L+D VM YA+SHNV+  T++
Sbjct: 61   VFARGLPNYNQFVFSVLSHRDKSISLQDIVLRNERGVEPKLVDAVMKYAMSHNVENFTLE 120

Query: 595  VNLNFELGFKLHPCIFFCRSLTHLKLSIWAVPSMTELPTSLQLPALESLHLEHVTFAADD 774
            + LNF+ G+ L P IF C+SLTHLKL  W VP M ++PTSL+LPAL+SLHL   TF A+D
Sbjct: 121  LYLNFKPGYTLRPSIFSCKSLTHLKLLFWGVPWMMKIPTSLELPALKSLHLISATFVAND 180

Query: 775  NGCAEPFSACHRLNTLVLDRCNLHRDAKFLCISNSKLSSLTIGSTIQEVAYKVVLSTPNL 954
            NG  EPFS    L+TLVL+  +L  +A  LCISNSKLSSL IG T  E  YKVVLSTPNL
Sbjct: 181  NGIVEPFSNFKMLSTLVLNCWSLQHNATVLCISNSKLSSLCIGCTPPE-RYKVVLSTPNL 239

Query: 955  SSLAVMRDPIHQVSMCSLSLLEQVNIDVEAHFHTNLERIYSALISWLQALASYVKTMTLS 1134
            +S+++ R  +HQ S C LS+LE+VNIDV       L+   S LI+WL+A+A+YVK +TLS
Sbjct: 240  NSISLFRGLVHQFSACDLSVLEEVNIDVA----PGLKYGISGLINWLEAIANYVKILTLS 295

Query: 1135 SSTLKILNVLSTPGSMTSELPSF 1203
            SSTL++L +  T  S+ S+LP F
Sbjct: 296  SSTLEVL-LHPTSSSIRSKLPCF 317


>ref|XP_003526558.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g78750-like [Glycine max]
          Length = 384

 Score =  268 bits (685), Expect = 3e-69
 Identities = 173/383 (45%), Positives = 229/383 (59%), Gaps = 22/383 (5%)
 Frame = +1

Query: 244  QSERDGKDERDRLSDLPDFVLLQIMKFMNTKHAVQTCVLSTRWKDLWKSLTNLALHSSDF 423
            +S  +G++E DRLSDLP+ VLL I+ F+N KHAV+TCVLSTRWKDLWK L  L LHSSDF
Sbjct: 6    RSHSEGRNEEDRLSDLPECVLLHILTFLNAKHAVRTCVLSTRWKDLWKRLPTLILHSSDF 65

Query: 424  TSLTHFSKFVSWVLSHRDSSISLHNLDLRRKGCIEPGLLDRVMTYAVSHNVQRLTIDVNL 603
             +   F+KFVS +LS RD+S++L  LD  R GCIEP LL R++ YAVSHNV++L I V  
Sbjct: 66   WTFKGFTKFVSRLLSLRDASLALLKLDFERHGCIEPQLLKRIVKYAVSHNVRQLGISVKC 125

Query: 604  NFELGFKLHPCIFFCRSLTHLKLSIWA---VPSMTELPTSLQLPALESLHLEHVTFAA-- 768
            +      +  C+F C++LT LKLS+     +   T  P SL L AL +LHL+H TF    
Sbjct: 126  DIR---DVPQCVFSCQTLTSLKLSVCPRGYIYGSTLFPKSLNLTALTTLHLQHFTFCKGD 182

Query: 769  -DDNGCAEPFSACHRLNTLVLDRCNLHRDAKFLCISNSKLSSLTIGSTIQEVAYKVVLST 945
             DD+  AEPF AC RL  L +D C + +DA+ LCIS++ L SLT+ S      YK+VLST
Sbjct: 183  DDDDDMAEPFYACRRLCDLTIDYCTV-KDARILCISSATLVSLTMRSDQSGDFYKIVLST 241

Query: 946  PNLSSLAVMRDPIHQVSMCSLSLLEQVNIDVEAHFHTNLERIYSALISWLQALASYVKTM 1125
            PNL + A    P  Q+   +LS LE+V+ID E  + T+LE     L+SWL  LA+ VK++
Sbjct: 242  PNLCAFAFTGAPYQQLLGSNLSSLERVSIDAEI-WSTSLESPL-ILLSWLLELAN-VKSL 298

Query: 1126 TLSSSTLKIL---------------NVLSTPGSMTSELPSFVXXXXXXXXXXXXXNISHE 1260
            T+S+STL++L               N+ S    +    P F                S  
Sbjct: 299  TVSASTLQVLFLIPELLKIKLPCLGNLKSLKVELKPLSPIFSMRLKAAKSWKAALKPSPP 358

Query: 1261 EV-SRIVECLLQKSRLAKVDIID 1326
             +   IV+ LLQ S  AKVD+ID
Sbjct: 359  PMPDGIVDFLLQNSPSAKVDMID 381


>ref|XP_003535282.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78760-like
            [Glycine max]
          Length = 490

 Score =  258 bits (659), Expect = 3e-66
 Identities = 172/363 (47%), Positives = 217/363 (59%), Gaps = 18/363 (4%)
 Frame = +1

Query: 250  ERDGKDERDRLSDLPDFVLLQIMKFMNTKHAVQTCVLSTRWKDLWKSLTNLALHSSDFT- 426
            +R  ++ERDRLS+LPDFVLL IM F++TK A++TC+LS RWKDLWK LT L+ + S    
Sbjct: 18   QRTSEEERDRLSELPDFVLLHIMNFIDTKDALRTCILSKRWKDLWKHLTTLSFYQSSSLF 77

Query: 427  --SLTHFSKFVSWVLSHRDSSISLHNLDLRRKGCIEPGLLDRVMTYAVSHNVQRLTIDVN 600
               + +F+KFVS VLS RD SISL N+ L     I   LL+R+M YAV HNVQ+LT+ + 
Sbjct: 78   NERVVNFNKFVSQVLSCRDGSISLINVRLVIYESIGSQLLNRIMKYAVLHNVQQLTMYIP 137

Query: 601  LNF-ELGFKLHPCIFFCRSLTHLKLSIWAVPSMTELPTSLQLPALESLHLEHVTFAADDN 777
              + ++   L P IF C+SLT+L L   +     ELP SLQLPAL+SL L +V F A DN
Sbjct: 138  FYYGKISTYLDPIIFSCQSLTYLSLHNLSSRPPLELPKSLQLPALKSLCLINVLFTATDN 197

Query: 778  GCAEPFSACHRLNTLVLDRCNLHRDAKFLCISNSKLSS-----LTIGSTIQEVAYKVVLS 942
             CAEPF+ C+ LNTLVL  C LH DAK L ISNS LSS     L I  T Q   +KVVLS
Sbjct: 198  VCAEPFTTCNLLNTLVLKYCFLHNDAKILFISNSNLSSLKLMDLKIRDTFQ---HKVVLS 254

Query: 943  TPNLSSLAV--------MRDPIHQVSMCSLSLLEQVNIDVEAHFHTNLERIYSALISWLQ 1098
            TPNLSSL V           P+   S C+LS LE+  I++           +  L+ WLQ
Sbjct: 255  TPNLSSLTVCFFEASSFTIQPLS--STCNLSCLEEGTINIATDIS------HPVLLGWLQ 306

Query: 1099 ALASYVKTMTLSSSTLK-ILNVLSTPGSMTSELPSFVXXXXXXXXXXXXXNISHEEVSRI 1275
               + VK +TLS  TLK IL  LS   +M S+ P FV              IS EEV++ 
Sbjct: 307  VFTN-VKILTLSYGTLKLILKDLSNLATMGSQPPCFVRLESLKFVTNQFRVISDEEVNKA 365

Query: 1276 VEC 1284
            V+C
Sbjct: 366  VDC 368


>ref|XP_003606020.1| F-box family protein [Medicago truncatula]
            gi|357476013|ref|XP_003608292.1| F-box family protein
            [Medicago truncatula] gi|355507075|gb|AES88217.1| F-box
            family protein [Medicago truncatula]
            gi|355509347|gb|AES90489.1| F-box family protein
            [Medicago truncatula]
          Length = 489

 Score =  249 bits (637), Expect = 1e-63
 Identities = 141/304 (46%), Positives = 198/304 (65%), Gaps = 4/304 (1%)
 Frame = +1

Query: 265  DERDRLSDLPDFVLLQIMKFMNTKHAVQTCVLSTRWKDLWKSLTNLALHSSDFTSLTHFS 444
            +E D LSDLPD V+L I+ F+N K AV+TC+LS RWK++WK +  L LHSSDF++  +F+
Sbjct: 26   NEEDNLSDLPDCVILHILSFLNAKEAVRTCILSNRWKNVWKCVPTLVLHSSDFSTFKNFT 85

Query: 445  KFVSWVLSHRDSSISLHNLDLRRKGCIEPGLLDRVMTYAVSHNVQRLTIDVNLNFELGFK 624
            KFVS +LSHRD +I+L  LD  R G IEP LL R++ YA SHNVQRL I V  +      
Sbjct: 86   KFVSKILSHRDGTIALQELDFERVGSIEPHLLKRIVNYAFSHNVQRLGISVKGDI---CH 142

Query: 625  LHPCIFFCRSLTHLKLSIWAVP----SMTELPTSLQLPALESLHLEHVTFAADDNGCAEP 792
            + PC+  CR+LT LKLS+          T  P SL LPAL SLHL +  F A D G  EP
Sbjct: 143  ILPCVSSCRTLTSLKLSVSPKGRHNYGRTLFPKSLDLPALTSLHLGNFVFCASDKGRTEP 202

Query: 793  FSACHRLNTLVLDRCNLHRDAKFLCISNSKLSSLTIGSTIQEVAYKVVLSTPNLSSLAVM 972
            FS  ++LN+LV+D C + +DA+ LCI +  L +LT+ +   +V YK+ LS P+LS+ A  
Sbjct: 203  FSGFNKLNSLVIDNCTV-KDAQILCILSETLVNLTMRNHSSDV-YKIELSAPSLSTFAFT 260

Query: 973  RDPIHQVSMCSLSLLEQVNIDVEAHFHTNLERIYSALISWLQALASYVKTMTLSSSTLKI 1152
              P  ++   +LS ++QVNID E    +N       L+SWL  LA+ +K++T+S+STL++
Sbjct: 261  GTPYQKLCGSNLSSVKQVNIDAE--MLSNYTEPPLVLLSWLLELAN-IKSLTVSASTLQV 317

Query: 1153 LNVL 1164
            L+++
Sbjct: 318  LSLI 321


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