BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00013838
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago...   173   5e-41
ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-...   164   4e-38
ref|NP_192116.1| DNA mismatch repair protein Msh6-1 [Arabidopsis...   129   8e-28
gb|AAB57798.1| AGAA.3 [Arabidopsis thaliana]                          127   4e-27
ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-...   117   4e-24

>ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula]
           gi|355500980|gb|AES82183.1| DNA mismatch repair protein
           Msh6-1 [Medicago truncatula]
          Length = 1312

 Score =  173 bits (439), Expect = 5e-41
 Identities = 86/113 (76%), Positives = 93/113 (82%)
 Frame = -1

Query: 341 SGKVESKKRKLGGVEKLEPTKKSKSGTEVNRGAFKLPALKPMNNLEVKKTSDGTDNAVTG 162
           S KVE KKRKLGG  K+EP KKSKSG EVNR A KL  L P+NNLEV+KTSDG DN  TG
Sbjct: 228 SNKVEPKKRKLGGGAKMEPMKKSKSGNEVNRVAVKLSPLAPLNNLEVRKTSDGADNVATG 287

Query: 161 DASERFAFREAQKLRFLREDRRDAKRRHPGDENYDSRTLYLPPDFLRSLSDGQ 3
           D+SERFA REAQK  FL +DRRDAKRR PGDENYDSRTLYLPPDF+R+LS GQ
Sbjct: 288 DSSERFALREAQKFHFLGKDRRDAKRRRPGDENYDSRTLYLPPDFVRNLSGGQ 340



 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 32/54 (59%), Positives = 37/54 (68%)
 Frame = -1

Query: 725 IGKRIRVYWPLDDAWYEGSVQSFDNVTSKHLVRYXXXXXXXXXXXXXKVEWPHD 564
           IGKRIRVYWPLD+AWYEG+V+SFD VTSKH +RY             K+EW  D
Sbjct: 91  IGKRIRVYWPLDEAWYEGTVKSFDTVTSKHRIRYDDDEEESIDLSKEKIEWIQD 144


>ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Glycine max]
          Length = 1269

 Score =  164 bits (414), Expect = 4e-38
 Identities = 82/111 (73%), Positives = 91/111 (81%)
 Frame = -1

Query: 335 KVESKKRKLGGVEKLEPTKKSKSGTEVNRGAFKLPALKPMNNLEVKKTSDGTDNAVTGDA 156
           KVE+KKRKL G EK EP KKSKSG EV +GAFKL  L+P     +K+TS+GTDN    + 
Sbjct: 224 KVETKKRKLSGTEKQEPAKKSKSGVEVGKGAFKLSVLEPT----IKETSNGTDNVAITEI 279

Query: 155 SERFAFREAQKLRFLREDRRDAKRRHPGDENYDSRTLYLPPDFLRSLSDGQ 3
           SERFA REAQKLRFL+EDRRDAKRR PGDENYDSRT+YLPPDFLRSLSDGQ
Sbjct: 280 SERFALREAQKLRFLKEDRRDAKRRRPGDENYDSRTIYLPPDFLRSLSDGQ 330



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 40/75 (53%), Positives = 50/75 (66%)
 Frame = -1

Query: 797 KPLLLIGXXXXXXXXXXSLFGQEVIGKRIRVYWPLDDAWYEGSVQSFDNVTSKHLVRYXX 618
           KPLL+IG          SL+ QE+IG+RI+VYWPLD AWYEGSV+SFD++TSKH+VRY  
Sbjct: 66  KPLLVIGASTSPPSASPSLYFQELIGRRIKVYWPLDKAWYEGSVKSFDSLTSKHVVRYDD 125

Query: 617 XXXXXXXXXXXKVEW 573
                      K+EW
Sbjct: 126 GEEESLDLSKEKIEW 140


>ref|NP_192116.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
           gi|6226648|sp|O04716.2|MSH6_ARATH RecName: Full=DNA
           mismatch repair protein MSH6; Short=AtMSH6; AltName:
           Full=MutS protein homolog 6 gi|3912921|gb|AAC78699.1|
           G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
           gi|5763966|emb|CAB53337.1| mismatch repair protein
           msh6-1 [Arabidopsis thaliana] gi|7268591|emb|CAB80700.1|
           G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
           gi|332656719|gb|AEE82119.1| DNA mismatch repair protein
           Msh6-1 [Arabidopsis thaliana]
          Length = 1324

 Score =  129 bits (325), Expect = 8e-28
 Identities = 92/283 (32%), Positives = 115/283 (40%), Gaps = 18/283 (6%)
 Frame = -1

Query: 797 KPLLLIGXXXXXXXXXXSLFGQEVIGKRIRVYWPLDDAWYEGSVQSFDNVTSKHLVRYXX 618
           KPLL+IG            +G EV+GK++RVYWPLD  WY+GSV  +D    KH+V Y  
Sbjct: 101 KPLLVIGQTPSPPQSVVITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYED 160

Query: 617 XXXXXXXXXXXKVEW-----PHDXXXXXXXXXXXXRMVIXXXXXXXXXXXXXXXXXXXXX 453
                      K EW       D            R V+                     
Sbjct: 161 GEEESLDLGKEKTEWVVGEKSGDRFNRLKRGASALRKVVTDSDDDVEMGNVEEDKSDGDD 220

Query: 452 XXXXDWGKNXXXXXXXXXXXXXXXXXXXXXXXXXXXASGKVESKK-----------RKLG 306
               DWGKN                                E+ K           RK  
Sbjct: 221 SSDEDWGKNVGKEVCESEEDDVELVDENEMDEEELVEEKDEETSKVNRVSKTDSRKRKTS 280

Query: 305 GVEKLEPTKKSKSGTEVNRGAFKLPALKPMNNL-EVKKTSDG-TDNAVTGDASERFAFRE 132
            V K    KKSK+ T      FK   ++P   + +  +   G  DN + GDA  RF  R+
Sbjct: 281 EVTKSGGEKKSKTDTGTILKGFKASVVEPAKKIGQADRVVKGLEDNVLDGDALARFGARD 340

Query: 131 AQKLRFLREDRRDAKRRHPGDENYDSRTLYLPPDFLRSLSDGQ 3
           ++K RFL  DRRDAKRR P DENYD RTLYLPPDF++ L+ GQ
Sbjct: 341 SEKFRFLGVDRRDAKRRRPTDENYDPRTLYLPPDFVKKLTGGQ 383


>gb|AAB57798.1| AGAA.3 [Arabidopsis thaliana]
          Length = 1362

 Score =  127 bits (319), Expect = 4e-27
 Identities = 92/288 (31%), Positives = 113/288 (39%), Gaps = 23/288 (7%)
 Frame = -1

Query: 797 KPLLLIGXXXXXXXXXXSLFGQEVIGKRIRVYWPLDDAWYEGSVQSFDNVTSKHLVRYXX 618
           KPLL+IG            +G EV+GK++RVYWPLD  WY+GSV  +D    KH+V Y  
Sbjct: 101 KPLLVIGQTPSPPQSVVITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYED 160

Query: 617 XXXXXXXXXXXKVEW-----PHDXXXXXXXXXXXXRMVIXXXXXXXXXXXXXXXXXXXXX 453
                      K EW       D            R V+                     
Sbjct: 161 GEEESLDLGKEKTEWVVGEKSGDRFNRLKRGASALRKVVTDSDDDVEMGNVEEDKSDGDD 220

Query: 452 XXXXDWGKNXXXXXXXXXXXXXXXXXXXXXXXXXXXASGKVESKK-----------RKLG 306
               DWGKN                                E+ K           RK  
Sbjct: 221 SSDEDWGKNVGKEVCESEEDDVELVDENEMDEEELVEEKDEETSKVNRVSKTDSRKRKTS 280

Query: 305 GVEKLEPTKKSKSGTEVNRGAFKLPALKPMNNLEVKK-------TSDGTDNAVTGDASER 147
            V K    KKSK+ T      FK   ++P   +   K            DN + GDA  R
Sbjct: 281 EVTKSGGEKKSKTDTGTILKGFKASVVEPAKKIGQGKPKSLLLVVKGLEDNVLDGDALAR 340

Query: 146 FAFREAQKLRFLREDRRDAKRRHPGDENYDSRTLYLPPDFLRSLSDGQ 3
           F  R+++K RFL  DRRDAKRR P DENYD RTLYLPPDF++ L+ GQ
Sbjct: 341 FGARDSEKFRFLGVDRRDAKRRRPTDENYDPRTLYLPPDFVKKLTGGQ 388


>ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cucumis sativus]
          Length = 1307

 Score =  117 bits (293), Expect = 4e-24
 Identities = 82/258 (31%), Positives = 110/258 (42%), Gaps = 13/258 (5%)
 Frame = -1

Query: 737 GQEVIGKRIRVYWPLDDAWYEGSVQSFDNVTSKHLVRYXXXXXXXXXXXXXKVEWPHD-X 561
           G  VIGK+I+VYWPLD  WYEG V+ FD    KHLV+Y             K+EW  +  
Sbjct: 95  GDGVIGKKIKVYWPLDKTWYEGRVKMFDEKAGKHLVQYDDAEEELLVLGNEKIEWVEESA 154

Query: 560 XXXXXXXXXXXRMVIXXXXXXXXXXXXXXXXXXXXXXXXXDWGKNXXXXXXXXXXXXXXX 381
                        V                          DWGKN               
Sbjct: 155 KKFKRLRRGSSPPVSAAVLEDMDDLNDLSDGDGSDDSRDEDWGKN---VENEVSEEEDVD 211

Query: 380 XXXXXXXXXXXXASGKVESKKRKLGGVE------------KLEPTKKSKSGTEVNRGAFK 237
                         G  +S++++ G VE            ++ P K   SG  V  G  +
Sbjct: 212 LVEENEDEDGSEEDGVGKSRRKQGGQVESKKRKMSNGKKVEVAPKKIKSSGGSVTSGGLQ 271

Query: 236 LPALKPMNNLEVKKTSDGTDNAVTGDASERFAFREAQKLRFLREDRRDAKRRHPGDENYD 57
           L +++     E      G  N +  DA ERF  REA+K RFL+EDR+DA +R PGD +YD
Sbjct: 272 LSSMETKIKSESTSVLKGI-NEIASDALERFNSREAEKFRFLKEDRKDANKRCPGDPDYD 330

Query: 56  SRTLYLPPDFLRSLSDGQ 3
            +TL+LPP F+++LSDGQ
Sbjct: 331 PKTLHLPPYFVKNLSDGQ 348